Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00512 ATGAAGAGGGAGCATCAGGACGGATCTGGGAAGGGTTATGGCGGAAGAAGGGGATTTTGGAAAGCGGGAAAATCAGAGAGCTCGGTTTCACAGTCGGCCGGAAAGGGTAAGATTTGGGAAGAAGAGCAAGATGCGGGAGGAATGGATGAGCTTCTCGCTGTTTTGGGGTACAAGGTTAGGTCGTCGGACATGGCCGATGTCGCGCAGAAGCTCGAACAGCTCGAAATGGTTATGGGTACTGCCCAGGAAGATGGAATTTCTCATCTCTCTTGCGACGCTGTTCATTACAATCCTTCTGATCTTTCTAGCTGGGTTCAAAGCATGCTTTCCGAGCTTAATAACCCTCCGAATAGCCTCGAATCTCTTCCAAATCAGAACGATGTTCCGGTTCTTGGTCGCTCGGAAGCTTCCGTGGTCGTTAATGGCGGATTCTCGAATTCTCAGCGGCAGTTCGAGAACCAATCTAGGGTTTTTGACGATTCAGAGTATGATTTGAGAGCGATACCCGGAGTTGCAGTTTATCATCAAATCGATTCGCCGAGGAAGCGATTAAAAACATCGTTACTATCAGATTCATCGTCTTCTTCCTCCGGAACCACGGCAGCGACTCCCGACCTATCCCGACCGGTGGTTCTCGTTGATTCGCAGGAAACCGGCGTACGGCTCGTCCACACACTCATGGGCTGTGCTGAAGCAGTTCAAGAAGATAACATGAAACTCGCCGACGCCCTAGTGAAACACATCGGAATTCTGGCGGCCTCGCAGGCCGGCGCCATGCGAAAAGTGGCCACCTATTTCGCTGAAGCTCTCGCTCGCCGGATTTACAGAATCTACCCACAAGATTGTCTAGACCCATCTTATACCGATCTTCTCCAGATGCACTTTTACGAGACCTGTCCTTATCTCAAATTTGCTCATTTCACTGCAAATCAAGCAATTCTTGAAGCGTTCGCGACCGCTAGTAGAGTCCACGTAATAGATTTCGGGCTCAAACAGGGCATGCAGTGGCCTGCTTTGATGCAGGCGCTCGCATTACGTCCCGGAGGGCCACCAGCTTTCCGTCTTACAGGAATTGGCCCACCCCAGCCAGATAACACCGACTCTTTACAGCAAGTGGGTTGGAAATTAGCGCAATTAGCCGACACCATTGGAATCAAATTTGAGTTTCGTGGGTTTCTCTGCAACTCTCTCGCAGATCTGGAGCCGGAAATACTCGACATCCGTCCACCGGAGTTCGAAACCGTGGCGGTGAACTCTGTTTTCGAGCTTCACCGTCTTCTCTCTCGGCCTTCTGCGGTGGAGAAGGTGCTTTCTTCGATCAAGAATATGAAGCCGAAAATCGTGACGATGGTGGAGCAGGAAGCGAATCACAACGGACCAATTTTCTTGGACCGGTTTACTGAGGCTCTCCACTATTACTCCAATCTGTTTGACTCGTTGGAAGGGTCAGCTCCGCCGAGTCAGGACTTAGTAATGTCTGAGTTGTATCTGGGAAGACAGATATGCAACGTGGTGGCTTGTGAAGGTCCGGACCGAGTTGAGCGGCACGAGACGTTGAGTCAGTGGCAAACTCGGATGGGATCGGCAGGGTTTGACCCAGTTCACCTAGGATCGAACGCGTTCAAGCAGGCGAGTATGTTGCTGGCTCTGTTCGCCGGAGGACATGGATACAGGGTAGAGGAAAACAATGGGTGTTTGATGCTTGGATGGCACACCCGGCCGTTGATCGCCACCTCGGCCTGGCAACTCGCCGCCGGAGAAACCCAGTGA 1770 51.69 MKREHQDGSGKGYGGRRGFWKAGKSESSVSQSAGKGKIWEEEQDAGGMDELLAVLGYKVRSSDMADVAQKLEQLEMVMGTAQEDGISHLSCDAVHYNPSDLSSWVQSMLSELNNPPNSLESLPNQNDVPVLGRSEASVVVNGGFSNSQRQFENQSRVFDDSEYDLRAIPGVAVYHQIDSPRKRLKTSLLSDSSSSSSGTTAATPDLSRPVVLVDSQETGVRLVHTLMGCAEAVQEDNMKLADALVKHIGILAASQAGAMRKVATYFAEALARRIYRIYPQDCLDPSYTDLLQMHFYETCPYLKFAHFTANQAILEAFATASRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDSLQQVGWKLAQLADTIGIKFEFRGFLCNSLADLEPEILDIRPPEFETVAVNSVFELHRLLSRPSAVEKVLSSIKNMKPKIVTMVEQEANHNGPIFLDRFTEALHYYSNLFDSLEGSAPPSQDLVMSELYLGRQICNVVACEGPDRVERHETLSQWQTRMGSAGFDPVHLGSNAFKQASMLLALFAGGHGYRVEENNGCLMLGWHTRPLIATSAWQLAAGETQ 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 10189118 10190887 - Bma015012.1 Bma02g00512 77762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00512 589 MobiDBLite consensus disorder prediction 186 204 - -
Bma02g00512 589 MobiDBLite consensus disorder prediction 1 36 - -
Bma02g00512 589 Gene3D - 47 112 IPR038088 -
Bma02g00512 589 ProSiteProfiles GRAS family profile. 213 582 IPR005202 -
Bma02g00512 589 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 43 582 IPR005202 -
Bma02g00512 589 Pfam Transcriptional regulator DELLA protein N terminal 49 116 IPR021914 -
Bma02g00512 589 Coils Coil 64 84 - -
Bma02g00512 589 SMART DELLA_2 49 122 - -
Bma02g00512 589 Pfam GRAS domain family 222 582 IPR005202 -
Bma02g00512 589 PANTHER DELLA PROTEIN RGL1 43 582 IPR030006 GO:0003712|GO:0005634
Bma02g00512 589 MobiDBLite consensus disorder prediction 185 205 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00461 Bma-Chr1:3829901 Bma02g00512 Bma-Chr2:10189118 0 dispersed
Bma02g00512 Bma-Chr2:10189118 Bma06g01086 Bma-Chr6:47704024 0 dispersed
Bma01g01758 Bma-Chr1:58418908 Bma02g00512 Bma-Chr2:10189118 3.28E-17 transposed
Bma02g00522 Bma-Chr2:10425819 Bma02g00512 Bma-Chr2:10189118 2.11E-171 transposed
Bma04g01132 Bma-Chr4:28127681 Bma02g00512 Bma-Chr2:10189118 1.92E-53 transposed
Bma09g00797 Bma-Chr9:46460303 Bma02g00512 Bma-Chr2:10189118 2.68E-55 transposed
Bma15g00320 Bma-Chr15:3063269 Bma02g00512 Bma-Chr2:10189118 5.01E-26 transposed
Bma01g01147 Bma-Chr1:12442892 Bma02g00512 Bma-Chr2:10189118 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56879 PF03514 GRAS 4.70E-135 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00512 K14494 - tcc:18601873 863.218