Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma02g00535 | ATGAAGAGATTAAAGCTAGAACTTAAGCAAACTATGGATATGTATAGCTCGGCTTGCAAAGAAGCAATCTCAGCTAAAAATAAGGCTAAAGAACTTCATCTGTGGAAGGTAGAGGAGGCTCGAAAACTTGAGGAAGTGAAACTCGCAGAAGAGGCAGCTCTTGCCATTGCAGAGATGGAGAAGGCCAAGTGCAGAGTGGCAATCGAAGCGGCCGAGGCGGCACAGAGGATGGCTGAGAAGGAAGTGCTGAAAAGAAAACAGGCAGAGATGAAGGCGAGAAAAGAGGCCGAAGAGAAGAATAGAGCATTGACTGCTTTGGCTCACAACGACGTTCGGTACAGAAAGTACACCATCGATGAGATCGAAACCGCCACCGAGAAATTCTCCGATGAACACAAAATCGGTGAAGGTGGGTATGGTCCCGTTTATAAAGGCAAGCTCGACCACACGCCTGTTGCGATCAAAGTTTTACGACCGGATGCAGCTCAGGGAAGAAAGCAATTTCAGCAAGAGGTTGAAGTACTGAGCTGCATAAGGCATCCTCACATGGTGCTTCTCCTCGGCGCTTGTCCGGAATACGGGTGTTTAGTGTACGAGTTCATGAACCACGGGAGCTTGGAAGATCGACTTTTTCGAAGAGGAAACACTCCGATGATATCGTGGAGAAACCGGTTCAAAATATCGGCAGAGATCGCCACCGCTCTCTTGTTTCTCCACCAATCAAAACCCGAGCCTCTCGTCCACAGAGACCTCAAGCCGGCCAACATTCTCTTGGATCAAAACTACGTGAGTAAGATCAGCGATGTCGGATTAGCGCGACTGGTCCCCCCATCCGTAGCCGATCAAGTGACTCAATATCACATGACTTCAGCGGCCGGGACCTTCTGTTACATCGATCCGGAGTATCAACAAACCGGAAAGTTAACGACGAAGTCGGACGTGTACTCGTTCGGAATAATGCTTCTCCAAATCATCACTGCTAGGCCACCGATGGGTCTAGCCCACCATGTTCAGAGGGCGATCGAGAAGGACAGATTTGAGGAGATGCTAGACCCTGCAGTCCCAGACTGGCCTGTGGAAGAGGCTCTATCATTTGCTAAATTGGCTTTGAAGTGTGCTGAGCTTAGGAAAAAAGACAGGCCGGATCTCGGCAGCGACATTGTCCCGGAGCTTAACCGATTGAGAGACCTCGGAAAAAGTTCCGATCAATCCGAGTTTCTCAGACACGGCAACGGAGAACGGAGTCACAGTCCGATTCCTCGCCCTCTTCCTGCAAATTAA | 1281 | 49.65 | MKRLKLELKQTMDMYSSACKEAISAKNKAKELHLWKVEEARKLEEVKLAEEAALAIAEMEKAKCRVAIEAAEAAQRMAEKEVLKRKQAEMKARKEAEEKNRALTALAHNDVRYRKYTIDEIETATEKFSDEHKIGEGGYGPVYKGKLDHTPVAIKVLRPDAAQGRKQFQQEVEVLSCIRHPHMVLLLGACPEYGCLVYEFMNHGSLEDRLFRRGNTPMISWRNRFKISAEIATALLFLHQSKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSVADQVTQYHMTSAAGTFCYIDPEYQQTGKLTTKSDVYSFGIMLLQIITARPPMGLAHHVQRAIEKDRFEEMLDPAVPDWPVEEALSFAKLALKCAELRKKDRPDLGSDIVPELNRLRDLGKSSDQSEFLRHGNGERSHSPIPRPLPAN | 426 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 10539998 | 10541470 | - | Bma015040.1 | Bma02g00535 | 77785 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma02g00535 | 426 | PANTHER | OS02G0152300 PROTEIN | 1 | 409 | - | - | |
Bma02g00535 | 426 | SUPERFAMILY | Protein kinase-like (PK-like) | 111 | 383 | IPR011009 | - | |
Bma02g00535 | 426 | MobiDBLite | consensus disorder prediction | 394 | 426 | - | - | |
Bma02g00535 | 426 | Coils | Coil | 71 | 106 | - | - | |
Bma02g00535 | 426 | ProSiteProfiles | Protein kinase domain profile. | 128 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma02g00535 | 426 | Gene3D | Transferase(Phosphotransferase) domain 1 | 201 | 411 | - | - | |
Bma02g00535 | 426 | SMART | serkin_6 | 128 | 391 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma02g00535 | 426 | CDD | STKc_IRAK | 134 | 394 | - | - | |
Bma02g00535 | 426 | Pfam | Protein tyrosine and serine/threonine kinase | 131 | 383 | IPR001245 | GO:0004672|GO:0006468 | |
Bma02g00535 | 426 | MobiDBLite | consensus disorder prediction | 394 | 415 | - | - | |
Bma02g00535 | 426 | PANTHER | KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN | 1 | 409 | - | - | |
Bma02g00535 | 426 | Gene3D | Phosphorylase Kinase; domain 1 | 105 | 200 | - | - | |
Bma02g00535 | 426 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 246 | 258 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00535 | Bma-Chr2:10539998 | Bma07g00657 | Bma-Chr7:11006423 | 0 | dispersed | |
Bma10g01235 | Bma-Chr10:43916952 | Bma02g00535 | Bma-Chr2:10539998 | 7.04E-68 | transposed | |
Bma02g00346 | Bma-Chr2:5577973 | Bma02g00535 | Bma-Chr2:10539998 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66348 | PF07714 | PK_Tyr_Ser-Thr | 1.90E-42 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma02g00535 | - | - | csv:101203326 | 644.039 |