Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00535 ATGAAGAGATTAAAGCTAGAACTTAAGCAAACTATGGATATGTATAGCTCGGCTTGCAAAGAAGCAATCTCAGCTAAAAATAAGGCTAAAGAACTTCATCTGTGGAAGGTAGAGGAGGCTCGAAAACTTGAGGAAGTGAAACTCGCAGAAGAGGCAGCTCTTGCCATTGCAGAGATGGAGAAGGCCAAGTGCAGAGTGGCAATCGAAGCGGCCGAGGCGGCACAGAGGATGGCTGAGAAGGAAGTGCTGAAAAGAAAACAGGCAGAGATGAAGGCGAGAAAAGAGGCCGAAGAGAAGAATAGAGCATTGACTGCTTTGGCTCACAACGACGTTCGGTACAGAAAGTACACCATCGATGAGATCGAAACCGCCACCGAGAAATTCTCCGATGAACACAAAATCGGTGAAGGTGGGTATGGTCCCGTTTATAAAGGCAAGCTCGACCACACGCCTGTTGCGATCAAAGTTTTACGACCGGATGCAGCTCAGGGAAGAAAGCAATTTCAGCAAGAGGTTGAAGTACTGAGCTGCATAAGGCATCCTCACATGGTGCTTCTCCTCGGCGCTTGTCCGGAATACGGGTGTTTAGTGTACGAGTTCATGAACCACGGGAGCTTGGAAGATCGACTTTTTCGAAGAGGAAACACTCCGATGATATCGTGGAGAAACCGGTTCAAAATATCGGCAGAGATCGCCACCGCTCTCTTGTTTCTCCACCAATCAAAACCCGAGCCTCTCGTCCACAGAGACCTCAAGCCGGCCAACATTCTCTTGGATCAAAACTACGTGAGTAAGATCAGCGATGTCGGATTAGCGCGACTGGTCCCCCCATCCGTAGCCGATCAAGTGACTCAATATCACATGACTTCAGCGGCCGGGACCTTCTGTTACATCGATCCGGAGTATCAACAAACCGGAAAGTTAACGACGAAGTCGGACGTGTACTCGTTCGGAATAATGCTTCTCCAAATCATCACTGCTAGGCCACCGATGGGTCTAGCCCACCATGTTCAGAGGGCGATCGAGAAGGACAGATTTGAGGAGATGCTAGACCCTGCAGTCCCAGACTGGCCTGTGGAAGAGGCTCTATCATTTGCTAAATTGGCTTTGAAGTGTGCTGAGCTTAGGAAAAAAGACAGGCCGGATCTCGGCAGCGACATTGTCCCGGAGCTTAACCGATTGAGAGACCTCGGAAAAAGTTCCGATCAATCCGAGTTTCTCAGACACGGCAACGGAGAACGGAGTCACAGTCCGATTCCTCGCCCTCTTCCTGCAAATTAA 1281 49.65 MKRLKLELKQTMDMYSSACKEAISAKNKAKELHLWKVEEARKLEEVKLAEEAALAIAEMEKAKCRVAIEAAEAAQRMAEKEVLKRKQAEMKARKEAEEKNRALTALAHNDVRYRKYTIDEIETATEKFSDEHKIGEGGYGPVYKGKLDHTPVAIKVLRPDAAQGRKQFQQEVEVLSCIRHPHMVLLLGACPEYGCLVYEFMNHGSLEDRLFRRGNTPMISWRNRFKISAEIATALLFLHQSKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSVADQVTQYHMTSAAGTFCYIDPEYQQTGKLTTKSDVYSFGIMLLQIITARPPMGLAHHVQRAIEKDRFEEMLDPAVPDWPVEEALSFAKLALKCAELRKKDRPDLGSDIVPELNRLRDLGKSSDQSEFLRHGNGERSHSPIPRPLPAN 426
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 10539998 10541470 - Bma015040.1 Bma02g00535 77785
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00535 426 PANTHER OS02G0152300 PROTEIN 1 409 - -
Bma02g00535 426 SUPERFAMILY Protein kinase-like (PK-like) 111 383 IPR011009 -
Bma02g00535 426 MobiDBLite consensus disorder prediction 394 426 - -
Bma02g00535 426 Coils Coil 71 106 - -
Bma02g00535 426 ProSiteProfiles Protein kinase domain profile. 128 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00535 426 Gene3D Transferase(Phosphotransferase) domain 1 201 411 - -
Bma02g00535 426 SMART serkin_6 128 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00535 426 CDD STKc_IRAK 134 394 - -
Bma02g00535 426 Pfam Protein tyrosine and serine/threonine kinase 131 383 IPR001245 GO:0004672|GO:0006468
Bma02g00535 426 MobiDBLite consensus disorder prediction 394 415 - -
Bma02g00535 426 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 1 409 - -
Bma02g00535 426 Gene3D Phosphorylase Kinase; domain 1 105 200 - -
Bma02g00535 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00535 Bma-Chr2:10539998 Bma07g00657 Bma-Chr7:11006423 0 dispersed
Bma10g01235 Bma-Chr10:43916952 Bma02g00535 Bma-Chr2:10539998 7.04E-68 transposed
Bma02g00346 Bma-Chr2:5577973 Bma02g00535 Bma-Chr2:10539998 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66348 PF07714 PK_Tyr_Ser-Thr 1.90E-42 CL0016 Bma PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00535 - - csv:101203326 644.039