Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00549 ATGGTTCTGCGTAACGGTTCGAAGGTTTGGATTGAAGACAGAGAGTTTGCTTGGGTTGCCGCTGAAGTCATTGACCAAAGTGGTAAACAGTTGCGAGTTGTGACTGCTTCGGGGAAGAAGGTTTTGGCTTCTCCAGAGAAGGTCTTTCCAAGGGATGCAGACGAGGAGGATCATGGCGGAGTGGACGACATGACGAAGTTGACTTATTTGAATGAGCCTGGCGTGCTATATAATCTGCAGAGGAGATATTCTCACAACGAAATATATACATACACAGGTAGGATTTTGATTGCCGTTAATCCATTCACAAAGCTTCCACATCTGTACAATATCCATATGATGGAGCAGTATAAGGGTGCTCCTTTTGGGGAACTCAGTCCTCATGTTTTTGCAGTTTCTGATGCTTCTTATAGGTCGATGATTAGTGATGGTCGAAGTCAATCCATATTAGTTAGTGGAGAAAGTGGGGCAGGTAAAACTGAAACAACGAAATTAATAATGCAATATCTCACATTTGTTGGCGGTCGTGCTTCTGGTGATGATAGGACAGTTGAGCAACAAGTTCTTGAATCAAATCCACTCCTAGAGGCCTTTGGGAATGCAAGGACGGTTAGAAACGATAATTCAAGTCGTTTTGGCAAATTTGTAGAGATTCAGTTTGATGCTGATGGTAGAATATCTGGAGCTGCAATTAGGACTTACCTTTTGGAGAGATCTCGTGTTGTCCAGATAACAGATCCTGAGAGGAATTATCACTGCTTTTATCAGCTGTGTGCATCTGGGAGGGATGCAGAGAAGTATAATTTAGATCAACCAAGTAAATTCCACTATTTAAATCAAAGCAAGACCTATGAACTTGATGGGGTGAACAGTGCTGAGGAATACATGAAGACCAGGAGGGCGATGGATATAGTTGGCATAAATCGTGAAGACCAGGAAGCTATCTTTCGAACATTGGCTGCAATATTGCATCTGGGCAACATTGAGTTTTCTCCTGGAAAGGAGCACGATTCATCAACTATAAAGGATAAAAAATCTAGTTTTCATCTCCAAATGGCTGCTAATCTTTTCATGTGTGATGTGAATCTCTTAATATCAACTATCTGTACGCGCACAATTCAAACCCTTGAAGGAAGTATTATCATGGCTCTTGATTGTAATGCTGCAGTTGCCAGTCGGGATGCATTGGCAAAGACCGTTTATGCACGATTGTTTGACTGGCTTGTTGACAAGATTAATCAGTCTGTTGGACAAGACCCAAATTCATCTATGCAAATTGGGGTGTTAGACATTTATGGATTTGAATGCTTTAAGGATAACAGTTTCGAGCAGTTTTGCATCAATTTCGCAAATGAAAAGCTTCAGCAGCATTTTAACGAGCATGTATTCAAGACAGAGCAGGAGGAATATAATAAAGAAGAAATTAACTGGAGCTACATTGAATTTATTGACAACCAGGATGTCCTCGATTTAATTGAGAAGAAACCTGTTGGGATAATTTCTCTTCTTGATGAAGCTTGCATGTTCCCAAGATCAACCCATAAGACGTTTTCAACCAAATTATTTCAGAACTTTCAAGGCCATCAAAGATTAGAAAAGGCAAAATTTTCAGAAACAGATTTTACGGTTTCCCATTATGCTGGAAAGGTCACTTATCATTCAGATACATTTTTGGAAAAAAATCGTGATTATGTAGTGGTAGAGCATTGCAATTTATTGTCTTCTTCCAAATGCACTTTTGTGGCTGGTCTATTCCCTTTACTGCCAGAAGAATCTTCTCGGTCTTCTTATAAATTTTCTTCTGTGGCCTCTAGATTCAGGCAACAACTTCAAGCACTCATGGAGATCCTCAATTCAACAGAACCTCATTACATACGGTGTGTAAAGCCCAATTCTCTTAATCGGCCTCAGAAGTTTGAGAATCAAAGTATTCTACACCAACTACGATGTGGGGGTGTTTTAGAAGCTGTGCGGATAAGTTTGGCTGGTTATCCCACTAGAAGAACGTATTCAGAGTTTATAGATCGTTTTGGACTTTTGGCTCCTGAACTCATGGATGGAAGTTATGATGAAAAAGCTACAGTGGAGAAGATTTTACAGAAGTTAAAGCTTAGTAATTTTCAGTTGGGGAGGACAAAAGTGTTTCTTAGAGCTGGTCAAGTTGGTGTTTTAGATGCTCGACGGTCAGAAGTATTGGATAATGCTGCAAAGTGCATTCAACGTAGACTGCGGACACATTATGCACACAAGGAATTCGCTCGATGGAGAACATACAAAGTTCGTACTGCTTTCCGCCATGACCAAGCTTCCGTGGTTGCTATCCAGTGTCGTTGGCGACAAAAAGTGGCAAAAAGAGAACTTCGAAGGCTTAAGCAAGAGGCCAATGAGGCTGGAGCATTGCGATTAGCTAAAAGTAAACTTGAGAAGCAAATAGAAGAGCTAACATGGCGGTTACATCTAGAAAAGCGACTGCGGGTATGA 2481 40.75 MVLRNGSKVWIEDREFAWVAAEVIDQSGKQLRVVTASGKKVLASPEKVFPRDADEEDHGGVDDMTKLTYLNEPGVLYNLQRRYSHNEIYTYTGRILIAVNPFTKLPHLYNIHMMEQYKGAPFGELSPHVFAVSDASYRSMISDGRSQSILVSGESGAGKTETTKLIMQYLTFVGGRASGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDADGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCASGRDAEKYNLDQPSKFHYLNQSKTYELDGVNSAEEYMKTRRAMDIVGINREDQEAIFRTLAAILHLGNIEFSPGKEHDSSTIKDKKSSFHLQMAANLFMCDVNLLISTICTRTIQTLEGSIIMALDCNAAVASRDALAKTVYARLFDWLVDKINQSVGQDPNSSMQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKTEQEEYNKEEINWSYIEFIDNQDVLDLIEKKPVGIISLLDEACMFPRSTHKTFSTKLFQNFQGHQRLEKAKFSETDFTVSHYAGKVTYHSDTFLEKNRDYVVVEHCNLLSSSKCTFVAGLFPLLPEESSRSSYKFSSVASRFRQQLQALMEILNSTEPHYIRCVKPNSLNRPQKFENQSILHQLRCGGVLEAVRISLAGYPTRRTYSEFIDRFGLLAPELMDGSYDEKATVEKILQKLKLSNFQLGRTKVFLRAGQVGVLDARRSEVLDNAAKCIQRRLRTHYAHKEFARWRTYKVRTAFRHDQASVVAIQCRWRQKVAKRELRRLKQEANEAGALRLAKSKLEKQIEELTWRLHLEKRLRV 826
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 11098431 11111832 + Bma015065.2 Bma02g00549 77799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00549 826 ProSiteProfiles IQ motif profile. 767 796 IPR000048 GO:0005515
Bma02g00549 826 Gene3D - 435 620 - -
Bma02g00549 826 PANTHER MYOSIN-15 753 825 - -
Bma02g00549 826 PANTHER MYOSIN-15 4 754 - -
Bma02g00549 826 Coils Coil 780 824 - -
Bma02g00549 826 Gene3D - 663 768 - -
Bma02g00549 826 SMART MYSc_2a 53 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00549 826 Pfam Myosin head (motor domain) 61 717 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00549 826 Gene3D - 249 306 - -
Bma02g00549 826 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00549 826 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00549 826 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00549 826 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00549 826 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00549 826 Gene3D Kinesin motor domain 62 659 IPR036961 -
Bma02g00549 826 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bma02g00549 826 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00549 826 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Bma02g00549 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 794 IPR027417 -
Bma02g00549 826 PANTHER MYOSIN 753 825 - -
Bma02g00549 826 PANTHER MYOSIN 4 754 - -
Bma02g00549 826 Pfam Myosin N-terminal SH3-like domain 6 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bma02g00549 826 CDD MYSc_Myo11 73 717 IPR036018 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00910 Bma02g00549 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00549 Bma-Chr2:11098431 Bma07g00554 Bma-Chr7:7539438 0 dispersed
Bma01g00910 Bma-Chr1:8809128 Bma02g00549 Bma-Chr2:11098431 2.02E-34 wgd
Bma02g00335 Bma-Chr2:4740102 Bma02g00549 Bma-Chr2:11098431 3.72E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00549 K10357 - zju:107420053 1353.96