Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma02g00554 | ATGGAGAAGGATATACGTATTAACTACATGTTCACTAGGATTGTAAAGCTTATTGTCGTTGAGCTCTATTGGACGCATGCTGCGGCTTGCATCTTTTACTATTTGGCTACAACTCTTCCTCCTTCAGAAGAAGGGTACACATGGATTGGAAGCTTAAAGTTGGGAGATTACAGTTACTCCAACTTCAGAGATATCGATCTATGGAAACGCTACACAACATCCTTATATTTTGCCATAGTAACCATGGCCACTGTTGGCTATGGAGATATACATGCAGTTAATATGAGGGAAATGATATTTATAATGATATATGTCTCTTTTGACATGATTCTTGGTGCTTATTTGATCGGTAACATGACAGCCTTAATTGTTAAAGGCTCAAAGACTGAAAAGTTCAGAGATAAAACCACAGATCTCATCAAATACATGAATAGAAATAGGCTTGGAAAAGACATCCGCAATCAGATCAAAGGTCATCTACGTTTGCAGTACGAGAGTAGCTACACTGAAGCTGCTGTTCTTCAGGACATTCCCATTTCTATCCGTGCCAAGATTTCTCAAACTTTATATTTGCCTTACATTGAGAATGTTTCACTTTTCAAGGGATGCTCATTTGAGTTCATCAATCAAATAGCTATAAGACTACATGAAGAGTTTTTTCTCCCTGGAGAAGTGATAATGGAACAGGGAAATGTGGTGGATCAACTATATTTTATCTGTCATGGTAAATTGGAGGAACTGGGCATAGGAGAAGATGGATCAGAAGAAGCTGTTTCAGTCCTAAAACCCAACAACTCATTTGGAGAGATTTCTATTCTTTGCAATATTCCTCAACCATATACAGTTCGTGTTAGTGAATTATGTCGGCTTCTGAGGCTTGACAAGCAGTCATTTACAAATATTCTTGATATCTACTTTTATGATGGAAGGAAAATCTTGAACAATCTTCTAGAGGGAAAAGAATCTAGTCTCCGAGTGAAGCAGTTGGAGTCAGATATCACATTTCACATTGGAAAGCAAGAAGCTGAACTTGCTTTAAAGGTGAATAGTGCAGCTTACCATGGAGATTTGTATCAGCTCAAAGGTTTGATCCGAGCAGGAGCTGATCCAAACAAGAAAGATTACGATGGAAGGTCGCCATTGCACCTTGCAGCATCAAGAGGGTACGAGGATATTGCACTTTTTCTGATTCAGGAAGGAGTAGACACCAACATAAAAGAAGCCATAAAAAACGGGCATGATCGAGTTGCGGCTTTACTTGTGAAAGAAGGTGCCTTTTTAAAGATAGATGACGCTGGGAGCTTTCTCTGTACAGCCATTGCAAGGGGGGATTCAGATTTTCTTAAAAGATTATTGGGCAATGGGATTGATCCAAACTCGAGGGATTATGATTATCGAACTCCACTTCATATTGCTGCTTCTGAAGGACTATATCTGATGGCTAAGCTGCTGGTAGAAGCTGGGGCCAGTGTCTTTTCGAAAGACAGATGGGGAAATACCCCTCTGGACGAGTGCCGGACGTGTGGAAACAATAATCTGATCAAACTAATGGAAGAAGCAAAGGCAGTTCAGCTCTCTGCATTTCCTCAACAAACCCAAGAAGTCACTGGTATTTGCTAA | 1620 | 40.06 | MEKDIRINYMFTRIVKLIVVELYWTHAAACIFYYLATTLPPSEEGYTWIGSLKLGDYSYSNFRDIDLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFIMIYVSFDMILGAYLIGNMTALIVKGSKTEKFRDKTTDLIKYMNRNRLGKDIRNQIKGHLRLQYESSYTEAAVLQDIPISIRAKISQTLYLPYIENVSLFKGCSFEFINQIAIRLHEEFFLPGEVIMEQGNVVDQLYFICHGKLEELGIGEDGSEEAVSVLKPNNSFGEISILCNIPQPYTVRVSELCRLLRLDKQSFTNILDIYFYDGRKILNNLLEGKESSLRVKQLESDITFHIGKQEAELALKVNSAAYHGDLYQLKGLIRAGADPNKKDYDGRSPLHLAASRGYEDIALFLIQEGVDTNIKEAIKNGHDRVAALLVKEGAFLKIDDAGSFLCTAIARGDSDFLKRLLGNGIDPNSRDYDYRTPLHIAASEGLYLMAKLLVEAGASVFSKDRWGNTPLDECRTCGNNNLIKLMEEAKAVQLSAFPQQTQEVTGIC | 539 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 11324190 | 11327487 | + | Bma015074.2 | Bma02g00554 | 77804 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma02g00554 | 539 | PANTHER | POTASSIUM CHANNEL SKOR-LIKE | 1 | 535 | - | - | |
Bma02g00554 | 539 | SUPERFAMILY | Voltage-gated potassium channels | 4 | 159 | - | - | |
Bma02g00554 | 539 | SMART | cnmp_10 | 199 | 317 | IPR000595 | - | |
Bma02g00554 | 539 | Pfam | Cyclic nucleotide-binding domain | 219 | 303 | IPR000595 | - | |
Bma02g00554 | 539 | Gene3D | - | 337 | 407 | IPR036770 | - | |
Bma02g00554 | 539 | Gene3D | - | 3 | 125 | - | - | |
Bma02g00554 | 539 | PANTHER | POTASSIUM CHANNEL AKT1 | 1 | 535 | IPR045319 | GO:0005249|GO:0006813 | |
Bma02g00554 | 539 | Gene3D | Helix hairpin bin | 126 | 186 | - | - | |
Bma02g00554 | 539 | Gene3D | Jelly Rolls | 187 | 321 | IPR014710 | - | |
Bma02g00554 | 539 | ProSiteProfiles | Ankyrin repeat profile. | 464 | 496 | IPR002110 | GO:0005515 | |
Bma02g00554 | 539 | ProSiteProfiles | Ankyrin repeat region circular profile. | 464 | 496 | - | - | |
Bma02g00554 | 539 | SMART | ANK_2a | 464 | 493 | IPR002110 | GO:0005515 | |
Bma02g00554 | 539 | SMART | ANK_2a | 497 | 527 | IPR002110 | GO:0005515 | |
Bma02g00554 | 539 | SMART | ANK_2a | 431 | 460 | IPR002110 | GO:0005515 | |
Bma02g00554 | 539 | SMART | ANK_2a | 376 | 405 | IPR002110 | GO:0005515 | |
Bma02g00554 | 539 | ProSiteProfiles | Ankyrin repeat profile. | 376 | 408 | IPR002110 | GO:0005515 | |
Bma02g00554 | 539 | Pfam | Ankyrin repeats (3 copies) | 438 | 517 | IPR002110 | GO:0005515 | |
Bma02g00554 | 539 | Pfam | Ankyrin repeats (3 copies) | 351 | 428 | IPR002110 | GO:0005515 | |
Bma02g00554 | 539 | SUPERFAMILY | cAMP-binding domain-like | 127 | 317 | IPR018490 | - | |
Bma02g00554 | 539 | SUPERFAMILY | Ankyrin repeat | 350 | 520 | IPR036770 | - | |
Bma02g00554 | 539 | ProSiteProfiles | Ankyrin repeat region circular profile. | 376 | 407 | - | - | |
Bma02g00554 | 539 | PRINTS | EAG/ELK/ERG potassium channel family signature | 23 | 33 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bma02g00554 | 539 | PRINTS | EAG/ELK/ERG potassium channel family signature | 115 | 124 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bma02g00554 | 539 | PRINTS | EAG/ELK/ERG potassium channel family signature | 71 | 88 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
Bma02g00554 | 539 | Pfam | Ion transport protein | 7 | 124 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Bma02g00554 | 539 | PRINTS | Ankyrin repeat signature | 480 | 494 | IPR002110 | GO:0005515 | |
Bma02g00554 | 539 | PRINTS | Ankyrin repeat signature | 377 | 392 | IPR002110 | GO:0005515 | |
Bma02g00554 | 539 | CDD | CAP_ED | 199 | 313 | IPR000595 | - | |
Bma02g00554 | 539 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 199 | 319 | IPR000595 | - | |
Bma02g00554 | 539 | Gene3D | - | 408 | 533 | IPR036770 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00554 | Bma-Chr2:11324190 | Bma08g00105 | Bma-Chr8:1237938 | 0 | dispersed | |
Bma01g01158 | Bma-Chr1:12674262 | Bma02g00554 | Bma-Chr2:11324190 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma02g00554 | K21867 | - | mnt:21409781 | 941.028 |