Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00594 ATGGGGTCCTGCTTCTCAGCAGAGAGCAAGAGCCCTCAACCTGGTTCGCCCGTGAGTCCTTCCCCGAGAGTCAGGAAGAGGAAAAACTCGAAGAATAGACTCTTTTCGCGAAACTCTTCGTTCGATTATCAGAGGGAAGAATCACTGCATCGTATTCCGGAAAGGATGTTCTTAAACGGATCGAATGAGGTGGCATCCCTATTTACTCAACAGGGTAAGAAGGGGCCCAATCAGGATGCCATAATTTTTTGGGAGAATTTTGCTTCGAGGTCAGATACATTGTTTTGTGGAGTTTTTGACGGGCATGGCCCATATGGTCATTTTGTTGCAAAAAAAGTGAGAGATTCACTTCCTCTGAAACTCAGTGAACTTTTGGAAGATAATCCAACCAATGAGGACGAGCTTAGAGATCAAGATCTGATTATTGGAAACGTGGGGGACTCTAGAGCTGTTCTTGGTACAAGAGATATAGATGATTCACTTGTTGCAGTTCAACTGACAGTGGATCTCAAGCCTAACCTTCCAGAGGAAGCAGAGAGAATCAGAAGATGCAGAGGTCGAATTTTTGCGCTTAGAGAAGAACCTGAGGTTGCTCGAGTATGGCTTCCCAACAACAACTCCCCTGGCCTTGCCATGTCCCGGGCTTTTGGAGATTTCTGCCTCAAGGATTTTGGCCTTATTGCCGTTCCCGACATTTCTTATCGATGCCTCACCGAGAAAGACGAGTTTGTCGTCTTGGCCACTGATGGAATTTGGGATGTTCTTTCAAACGAAGAGGTAGTAGAAATTGTAGCTTCATCTCCTGCTCGTTCAACTGCAGCTCGAGATCTTGTTGAATCCGCGACCAAGGCATGGAGAAGTAGATTCCCCACATCCAAGGTCGATGATTGCGCTGTTGTCTGTCTCTTTTTCGACCCGAACTCGAATGCCTTATCGGCCGACTCAAATTCCAAATTTGAAGAAGAGCAAACTTCAATAGACCTTCTCCACCCTGCAATGGAGGATTCGGATCAGACCGAAGAAGAGACTCTAGATTCTTCTGAAGGAGTGGCTCGCGCAGACACAGTGATCAACCTTCCAAGGTTTCCTCCTGGAAAGAAGTAA 1104 46.47 MGSCFSAESKSPQPGSPVSPSPRVRKRKNSKNRLFSRNSSFDYQREESLHRIPERMFLNGSNEVASLFTQQGKKGPNQDAIIFWENFASRSDTLFCGVFDGHGPYGHFVAKKVRDSLPLKLSELLEDNPTNEDELRDQDLIIGNVGDSRAVLGTRDIDDSLVAVQLTVDLKPNLPEEAERIRRCRGRIFALREEPEVARVWLPNNNSPGLAMSRAFGDFCLKDFGLIAVPDISYRCLTEKDEFVVLATDGIWDVLSNEEVVEIVASSPARSTAARDLVESATKAWRSRFPTSKVDDCAVVCLFFDPNSNALSADSNSKFEEEQTSIDLLHPAMEDSDQTEEETLDSSEGVARADTVINLPRFPPGKK 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13543637 13546394 - Bma015139.2 Bma02g00594 77844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00594 367 Gene3D - 60 136 IPR036457 -
Bma02g00594 367 ProSiteProfiles PPM-type phosphatase domain profile. 64 304 IPR001932 -
Bma02g00594 367 Pfam Protein phosphatase 2C 136 282 IPR001932 -
Bma02g00594 367 MobiDBLite consensus disorder prediction 1 31 - -
Bma02g00594 367 SUPERFAMILY PP2C-like 58 306 IPR036457 -
Bma02g00594 367 Gene3D - 137 315 IPR036457 -
Bma02g00594 367 CDD PP2Cc 64 304 IPR001932 -
Bma02g00594 367 SMART PP2C_4 54 302 IPR001932 -
Bma02g00594 367 MobiDBLite consensus disorder prediction 330 367 - -
Bma02g00594 367 PANTHER ALPHABET, ISOFORM E-RELATED 1 126 - -
Bma02g00594 367 PANTHER ALPHABET, ISOFORM E-RELATED 138 329 - -
Bma02g00594 367 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 126 - -
Bma02g00594 367 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 138 329 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00594 Bma-Chr2:13543637 Bma08g00589 Bma-Chr8:36747947 3.40E-111 dispersed
Bma01g01194 Bma-Chr1:13528313 Bma02g00594 Bma-Chr2:13543637 2.60E-64 wgd
Bma14g01170 Bma-Chr14:17105289 Bma02g00594 Bma-Chr2:13543637 5.24E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00594 - - han:110912637 405.986