Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00600 ATGGAAGTGGAGGACGGCGACGAAGGCGGCGATGTCTTGATTCCTCCGCCCAATTTCTCCATGGTTGAGGATGGAATTTTTAGATCCAGTTTTCCTCATCCTTCCAACTTTTCTTTTCTTCGGACGTTGAATCTTCGCTCTGTCTTATATTTGTGTACAGACCCATATCCAGAAGAAAATATGGAGTTTCTTCGAGCCCAAAATATTCGGCTTTTTCAATTTGGAATAGAGGGGAAAACGGATCCTCCTGTATCTATTCCGAAGGCTACAATCATGAACGCGTTGAAAGTTCTAATCGATGTTAGGAATCACCCCATCTTGATACATTGCAAGGCGGGGAAGCATCGAACAGGCTGTCTTGTTGGTTGCCTGCGGAAATTGCAGAACTGGTGTTTGTCCTCCGTGCTGGAGGAGTATGGGCACTTCGCCGGTGTGAAATCGAGGAAGGCCGATCTGAGATTCATCGAGACATTTGATATTTTCTTACTGAGACAATGCCTTCACAGCATCATATACCAGTATCAAGGATACAGCTCGAAGAAAAGGCGCCTTCTCTACAAAGAAGAGACTGCACCAACACCATCGAAAATCGCATCAAGTTAG 603 45.27 MEVEDGDEGGDVLIPPPNFSMVEDGIFRSSFPHPSNFSFLRTLNLRSVLYLCTDPYPEENMEFLRAQNIRLFQFGIEGKTDPPVSIPKATIMNALKVLIDVRNHPILIHCKAGKHRTGCLVGCLRKLQNWCLSSVLEEYGHFAGVKSRKADLRFIETFDIFLLRQCLHSIIYQYQGYSSKKRRLLYKEETAPTPSKIASS 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 13616873 13618767 - Bma015146.1 Bma02g00600 77850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00600 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE 10 182 - -
Bma02g00600 200 ProSitePatterns Tyrosine specific protein phosphatases active site. 108 118 IPR016130 GO:0016311|GO:0016791
Bma02g00600 200 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 10 182 - -
Bma02g00600 200 CDD PFA-DSP_Siw14 13 159 - -
Bma02g00600 200 ProSiteProfiles Dual specificity protein phosphatase domain profile. 18 172 IPR020422 GO:0006470|GO:0008138
Bma02g00600 200 Pfam Tyrosine phosphatase family 13 160 IPR004861 -
Bma02g00600 200 Gene3D Protein tyrosine phosphatase superfamily 12 162 IPR029021 -
Bma02g00600 200 PRINTS Plant and fungal dual specificity phosphatase signature 69 83 IPR020428 GO:0016791
Bma02g00600 200 PRINTS Plant and fungal dual specificity phosphatase signature 50 63 IPR020428 GO:0016791
Bma02g00600 200 PRINTS Plant and fungal dual specificity phosphatase signature 86 100 IPR020428 GO:0016791
Bma02g00600 200 PRINTS Plant and fungal dual specificity phosphatase signature 13 30 IPR020428 GO:0016791
Bma02g00600 200 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 89 121 IPR000387 GO:0016311|GO:0016791
Bma02g00600 200 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 159 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00600 Bma-Chr2:13616873 Bma03g01308 Bma-Chr3:25800582 1.21E-72 dispersed
Bma02g00600 Bma-Chr2:13616873 Bma02g01405 Bma-Chr2:56279284 2.06E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00600 K18045 - cit:102621872 313.538