Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00650 ATGGCCAACTTTCGAATTCTCAGCTTCTTCTCTGCTGTCATCTTCCTCACAATGCCTTCTTTTTCCCAGCCCACCGACCTCTTTTATGCTGGATTCTCCAACACAGGAGCAAATCTGACCTTAATCGGCGTAGCGGAGATCGAGGACAATGGAATTTCGAAGCTCACTAACGAGACCAGTAGATTACTAGGTCGAGCTTTTTATGCTTCCCCTTTTCAGTTTAAGAACTCTACAGTTGGTAAAGTTTTCTCTTTTTCTTCCTCGTTTGCTTTCGGAATAATTCCTGAGTACCCGAAGCTCGGCGGCCATGGATTGGCCTTCACCATAGCTCCATCGAAGAACTTCACCGCTCTCCCCGTTCAGTATCTGGGTCTTCTTACTGCCAACAACAATGGTAATTTCTCAAACCATATCTTCGCCGTTGAGTTCGACACTGATCAGGATTTTGAGTTCCGAGATGTCAACGATAACCATGTCGGAATCGACATTAACAGTATGGAGTCGAATGCTTCCACCGCCGCCGGTTATTACTCTGATGAATCGACGAAACATGATCTGAATCTGAAAGGTGGGAAAGCCATCAAAACTTGGATCGAGTACGATTCAGTGAATTATATTTTTAATGTGACTATTTCGCCGTTTTCGACCAAACCAATCAAACCCATCTTGTCATTCAAGGTAGATCTCTCGCCCATTTTTAATGATTACATGTATGTCGGATTCTCTGCTTCAACTGGTATGCTCGCTAGCTCACACTATATATTAGGATGGAGCTTCAAGATGAACGGACAAGCTCAAGAGCTCGATTTATCCTCTCTTCCGTCACTTCCAGTTGTAGAACCCCCCAAAAACCAGACAGCTTTAATAATTGTAGTGTCAGTTGCGGCTACCATCGTATTTGTTTTTGCAGTAATTTCCGTCGTTTATCTCGTAAGAAAAATCAAGAATGCTGATATAACCGAGCCATGGGAGCTTCAAGTGGGTCCACATAGATACTCTTACAAAGAGCTCAAGCAAGCGACTAGAGGTTTCAGAGACAAAGAGCTTCTCGGCCGTGGTGGATTTGGAAAAGTCTTCAAAGGATTGTTACCAAAATCAAAAACCCAAATCGCAGTAAAGCAAATTTCCCGCGAATCAAAACAGGGTCTGCGCGAATTCGCCGCCGAAATAACCACCATTGGCCGGCTTCGTCACCGGAACTTAGTTCAGCTCCTCGGATGGTGCCGTCGGCGCAGCGATCTTCTCCTTGTTTACGACTTTATGGCGAACGGAAGCTTAGACCATATCCTTTTCGACGACTCAAAAACGATTTTGAATTGGGAGCAAAGATTTAATATCATAAAGGACGTTGCTTCGGGGCTTTTATATCTGCACGAAGGCTTCGAACAGGTGGTGATTCACAGAGATGTTAAAGCAAGCAACGTTTTGCTTGATAGTGATTTGACGGGGAAAGTCGGAGATTTCGGTCTGGCTAAACTCTACGAACACGGCGCGAATCCGAGCACGACGAGGGTCGTCGGAACTTTAGGGTATCTAGCTCCGGAGCTACGGAGAACTGGCAAAGCTACCACCAGCACAGATGTATTCGCGTTCGGAGCTCTTCTGCTCGAAGTTGCGACCGGAAGAAGACCCATTGAGCCGAAAGCTACGCCGGAGGAGGTAGTTTTGGTCGATTGGGTGTGGGATAAGTACAAGGAGGGATCTATTTTTGATGTGGTTGATCGGAAACTGAACGGCGACTACGATGAGGTTGAAATGGCTGTGGTTTTGAAGCTGGGGTTGATGTGTTCGAGCAACTCTCCGGTGGATCGGCTGAGCATGAGGCAGGTCGTGAAGTATTTGGAGGGGGAGATTGGTTTGGCGGACGATTTTATAGCTGCCGGCGGTTACGACAGAGGAAAGGCCCGGCACGGCGATGGGTTTGATGAATTTGTCAACTCTTTTGCTTCTTCGTTCAACCCCGCTACCTCATCTTCCTTCGCTACAAATAGGGATATGGATGGTAGCTCCGCTTCTCTTTCTCCTCGTCCTCTTCTTGGTAGAGAATAA 2049 46.56 MANFRILSFFSAVIFLTMPSFSQPTDLFYAGFSNTGANLTLIGVAEIEDNGISKLTNETSRLLGRAFYASPFQFKNSTVGKVFSFSSSFAFGIIPEYPKLGGHGLAFTIAPSKNFTALPVQYLGLLTANNNGNFSNHIFAVEFDTDQDFEFRDVNDNHVGIDINSMESNASTAAGYYSDESTKHDLNLKGGKAIKTWIEYDSVNYIFNVTISPFSTKPIKPILSFKVDLSPIFNDYMYVGFSASTGMLASSHYILGWSFKMNGQAQELDLSSLPSLPVVEPPKNQTALIIVVSVAATIVFVFAVISVVYLVRKIKNADITEPWELQVGPHRYSYKELKQATRGFRDKELLGRGGFGKVFKGLLPKSKTQIAVKQISRESKQGLREFAAEITTIGRLRHRNLVQLLGWCRRRSDLLLVYDFMANGSLDHILFDDSKTILNWEQRFNIIKDVASGLLYLHEGFEQVVIHRDVKASNVLLDSDLTGKVGDFGLAKLYEHGANPSTTRVVGTLGYLAPELRRTGKATTSTDVFAFGALLLEVATGRRPIEPKATPEEVVLVDWVWDKYKEGSIFDVVDRKLNGDYDEVEMAVVLKLGLMCSSNSPVDRLSMRQVVKYLEGEIGLADDFIAAGGYDRGKARHGDGFDEFVNSFASSFNPATSSSFATNRDMDGSSASLSPRPLLGRE 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 17988520 17990568 - Bma015239.1 Bma02g00650 77900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00650 682 CDD lectin_legume_LecRK_Arcelin_ConA 29 263 IPR001220 GO:0030246
Bma02g00650 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Bma02g00650 682 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00650 682 Gene3D - 25 273 - -
Bma02g00650 682 SUPERFAMILY Protein kinase-like (PK-like) 326 616 IPR011009 -
Bma02g00650 682 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 7 670 - -
Bma02g00650 682 Pfam Legume lectin domain 28 273 IPR001220 GO:0030246
Bma02g00650 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 279 IPR013320 -
Bma02g00650 682 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Bma02g00650 682 CDD STKc_IRAK 350 616 - -
Bma02g00650 682 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Bma02g00650 682 MobiDBLite consensus disorder prediction 659 682 - -
Bma02g00650 682 PANTHER - 7 670 - -
Bma02g00650 682 Gene3D Transferase(Phosphotransferase) domain 1 421 623 - -
Bma02g00650 682 ProSiteProfiles Protein kinase domain profile. 344 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00650 682 Pfam Protein kinase domain 345 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00650 Bma-Chr2:17988520 Bma04g00685 Bma-Chr4:6736610 0 dispersed
Bma02g00650 Bma-Chr2:17988520 Bma01g01856 Bma-Chr1:68080562 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66351 PF00069 Pkinase 6.80E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00650 - - jre:109006813 917.146