Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00714 GTTTCAATGGTGGTCGAAGATAGCGAGAGCTCTGGAAGCATAGTGCAAGACGTTACATCGCTTATTCACAGCCGCAAACATCGTCAGAAGTTGGAGGTTTATAATGAGGTTCTCCGTCGCCTTCAGGATTCCGACAACGACGAGGTTGTTCAGGCTGGATTTAAAGAGGAGCTATTGGCTCACTTTAATCGTCTCCCCACTCGATATGCAATGGATGTGAACGTGGAGAGGGCGGAAGATGTTCTTATGCACAAAAGATTGTTACATATGGCTCATGATCCTTTTAATCGACCGGCAATCGATGTACGCGTAGTACAGGTAAACCTCGTGATGGGTTCTTTGTCTGTCAGCATGCATCCTCCACCTGCCTTCGGTTCATCTGCTAACTTTGAAGTCCTTGCACCCGAAGGTGGAAAATCTCATGAACAGGATGAGGATCACTCTGTCTATGCCAATGCATATTTTTGCAGGCTCATGCATGAGATAACCTTCTCAACAGATGACAAACCAAAACGCCTTAGTCAGTTAACTTCCTTGATAGCTGAGATTGGGCTTAACATCCAAGAGGCACATGCATTTTCTACGGTGGATGGATATTCCTTGGACGTCTTTCTTGTTGATGGATGGCCTTATGAGGAAACCCAGCATTTGAGAATTGCATTGAATAAGGAAGTCCCAAAGATTCAGGGAAAGGATCAGTCAAAACATCAAATAATATATCGCGTAGGCGAGGATAAAGATTTGGAGCCTAACCCTGGGCTCGATTACGTGACAATACCATCAGACGGAACTGATGTATGGGAAATTGATCATAAACATTTGAAGTTTGAGAAAATAGTAGCTTCTGGGACATATGGTGACCTGTATAAGGGTACGTATCATAGTCAAGAAGTGGCAATCAAAATTCTCAAGCCTGAGCATGTAACTGTAGAAATGCAGCGGGAGTTTGCACAAGAAGTCTTTATTATGAGAAAAGTTCGGCACAAGAATGTTGTACAGTTTATTGGTGCGTGTACCAAGTCTCCAAATCTATGCATAGTAACAGGTAATAGAGTGTTTATATTTTCTAAATTTCAACTTAAAGTGGAAGTTAGGGGTCTCCTCATAAGTTATTTTTTCTTCTTTTCAGAATTTATGTCTGGTGGAAGTTTGTATGACTATTTACATAAACAAAATGGTGTGTTTAAGCTTCCATCTCTGGTCAAGGTAGCAATTGATATCTCAAAGGGAATGAACTACTTGCACCAAAATAACATAATCCACAGAGATTTGAAGGGCCCCAATCTTTTGATGGATGAAAATGAATTGATTAAGGTGGCTGATTTTGGGGTCGCCAGAGTAAAAGCTCAGTCTGGTGTTATGACAGCAGAAACAGGCACATACCGCTGGATGGCTCCTGAGGTTATAGAGCACAAGCCATATGATGACAAGGCTGATGTATTCAGTTTTGGCATCGTTTTGTGGGAGTTACTTACCGGCAAGCTTCCCTATGAATTCTTAACCCCATTACAAGCTGCCGTTGGAGTGGTCCAAAAGGGTTTAAGGCCTACAATTCCAAAACACACGCATCCAAAGCTTACTGAGTTGCTGGAGCAATGCTGGCAGCAGGACCCAGCGAGGAGACCTGACTTCTCCAAAATTATATCTATTTTGCAGAAAATAGCCAAAGAGGTTGGAAACGAAGGGGAGGTGCGCCGGAAGGAGAAAATGCCCGGACGATTCTTCTCTACCCTGAGACGTGGTCATCATTGTTGA 1755 42.96 VSMVVEDSESSGSIVQDVTSLIHSRKHRQKLEVYNEVLRRLQDSDNDEVVQAGFKEELLAHFNRLPTRYAMDVNVERAEDVLMHKRLLHMAHDPFNRPAIDVRVVQVNLVMGSLSVSMHPPPAFGSSANFEVLAPEGGKSHEQDEDHSVYANAYFCRLMHEITFSTDDKPKRLSQLTSLIAEIGLNIQEAHAFSTVDGYSLDVFLVDGWPYEETQHLRIALNKEVPKIQGKDQSKHQIIYRVGEDKDLEPNPGLDYVTIPSDGTDVWEIDHKHLKFEKIVASGTYGDLYKGTYHSQEVAIKILKPEHVTVEMQREFAQEVFIMRKVRHKNVVQFIGACTKSPNLCIVTGNRVFIFSKFQLKVEVRGLLISYFFFFSEFMSGGSLYDYLHKQNGVFKLPSLVKVAIDISKGMNYLHQNNIIHRDLKGPNLLMDENELIKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDDKADVFSFGIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTHPKLTELLEQCWQQDPARRPDFSKIISILQKIAKEVGNEGEVRRKEKMPGRFFSTLRRGHHC 584
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29988319 30003742 + Bma015374.2 Bma02g00714 77964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00714 584 CDD STKc_MAP3K-like 280 551 - -
Bma02g00714 584 Coils Coil 24 44 - -
Bma02g00714 584 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 19 348 - -
Bma02g00714 584 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 376 564 - -
Bma02g00714 584 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 19 348 - -
Bma02g00714 584 SUPERFAMILY ACT-like 160 223 IPR045865 -
Bma02g00714 584 PRINTS Tyrosine kinase catalytic domain signature 522 544 IPR001245 GO:0004672|GO:0006468
Bma02g00714 584 PRINTS Tyrosine kinase catalytic domain signature 376 389 IPR001245 GO:0004672|GO:0006468
Bma02g00714 584 PRINTS Tyrosine kinase catalytic domain signature 459 469 IPR001245 GO:0004672|GO:0006468
Bma02g00714 584 PRINTS Tyrosine kinase catalytic domain signature 478 500 IPR001245 GO:0004672|GO:0006468
Bma02g00714 584 PRINTS Tyrosine kinase catalytic domain signature 413 431 IPR001245 GO:0004672|GO:0006468
Bma02g00714 584 ProSiteProfiles ACT domain profile. 161 241 IPR002912 -
Bma02g00714 584 Gene3D Phosphorylase Kinase; domain 1 263 350 - -
Bma02g00714 584 ProSiteProfiles Protein kinase domain profile. 274 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00714 584 SUPERFAMILY Protein kinase-like (PK-like) 260 550 IPR011009 -
Bma02g00714 584 SMART serkin_6 274 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00714 584 Pfam Protein kinase domain 277 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00714 584 CDD ACT_TyrKc 159 225 - -
Bma02g00714 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Bma02g00714 584 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 376 564 - -
Bma02g00714 584 Gene3D Transferase(Phosphotransferase) domain 1 380 573 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00714 Bma-Chr2:29988319 Bma08g00742 Bma-Chr8:43584343 0 dispersed
Bma02g00714 Bma-Chr2:29988319 Bma12g00909 Bma-Chr12:40538335 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66354 PF00069 Pkinase 4.50E-55 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00714 - - tcc:18607478 808.52