Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00742 ATGGCTGGCCAAGTCAATCTTGTTGTTGGATCTCTTGTATGGGTTGAGGATCCTGAGGTAGCGTGGCTTGATGGGGAAATTGTAGAAGCTAATGGTGAAGACGTCAAAATAAACTGCACATCAGGAAAAATTATTGAGGCAAAAGCATCCAATATCTATCCAAAGGATCCTGAATTCCCTTCATGTGGTGTAGATGATATGACAAAATTGGCTTATCTGCACGAGCCAGGGCTTTTACAAAATTTGAAGTCTCGTTATGATATAAATGAAATATATACTTACACTGGGAATATATTGATAGCTGTTAATCCTTTTCGGAGGCTACCTCATTTATACAACAACCACATGATGGAACAGTATAAAGGGGCAGCTCTTGGAGAGCTAAGCCCACATCCTTTTGCCATTGCGGATTCTGCATACAGATTGATGATCAATGAAGGCACAAGTCAGTCAATTTTGGTCAGTGGGGAGAGTGGAGCTGGTAAGACAGAGAGTACGAAGATGCTTATGCATTATCTTGCGTTTATGGGAGGGAGAGCTGGAGGAAAAAGTGCAACGGAAGGCCGATCGGTTGAGCAACAAGTATTAGAGTCAAATCCTGTTTTGGAAGCATTTGGTAATGCAAAGACAGTAAGAAACAATAATTCGAGCCGTTTTGGTAAATTTGTGGAGATTCAATTTGATAAAAGAGGAAGAATATCTGGAGCTGCCATCAGAACTTATTTACTAGAAAGATCGCGCGTTTGCCAAGTTTCAGATCCAGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCGCCAAAAGAGGATATTGAAAGATACAAACTTGGGAATCCAAAAACATTTCATTACCTTAATCAATCTAATTGCTACAATCTGGAAGGTGTGGATGATTCTAAGGAATACCTGGTCACCAGGAATGCCATGGACGTAGTTGGAATAAATTCTGATGAGCAGGATGCAATATTCCGAGTAGTAGCTGCAATTCTCCATTTGGGCAATATTGAATTTGCAAAAGGAGAGGAAGTAGATTCTTCAGAACCCAAGGATGATATATCTCGGTTCCATCTCACGATGGCAGCTGAACTTTTCATGTGCGATGAAAAATCTCTTGAAGACTCCTTATGCAAACGAGTGATTGTTACCCGGGACGAGACTATTACAAAATGTCTTGATCCTGAATCTGCTACTGTTAGTCGGGACGCATTAGCCAAAATTGTTTATTCAAGGTTGTTTGATTGGATTGTGAACAAGATCAATAACTCAATTGGTCAAGATCCTGATTCAAAAAACTTAATCGGGGTTTTAGATATCTATGGATTTGAAAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAATTTGACTAATGAGAAATTACAGCAACATTTCAACCAGCACGTTTTCAAGATGGAGCAGGAAGAATATACAAAAGAAGAAATTGACTGGAGTTATATTGAGTTCATTGATAATCAAGATGTTCTTGATCTCCTTGAGAAGAAACCTGGCGGTGTCATCGCACTTTTGGATGAAGCATGTATGTTTCCAAGATCAACGTATGAGACATTTGCACAGAAGCTTTATCAAACTTTTAAAGACCATAAACGCTTTAGCAAGCCAAAGTTGTCATTGAGTGACTTCACAATTTGTCACTATGCTGGTGATGTCACCTACCAGACTGAACACTTCCTTGATAAGAACAAAGATTATGTTGTCGCAGAGCATCAAGCACTTTTAAGTGCTTCAACTTGCTCATTTGTTTCAGGCCTATTTCCTCCTTTACCTGAAGAATCTTCCAAATCATCTAAGTTTTCGTCAATAGGTTCTAGATTCAAGCAACAATTGCAAGCTCTACTTGAAACTTTGAGTGCCACTGAGCCACATTACATTCGCTGTGTAAAGCCAAACAACCTTCTGAAGCCATCCATGTTTGAGAATCATAATGTTTTACAGCAGCTTCGTTGCGGGGGAGTCATGGAAGCAATAAGGATCAGTTGTGCTGGATATCCCACTAGAAAGACTTTCGATGAATTTGTTGGTCGGTTTAGCATCTTGGCCCCTGATATTTTGATTGGGAGCTGCGAAGAGGTCAGTGCTTGCAAGAGGCTCCTGGAGAAGGTGGACCTCAAAGGCTATCAGATTGGAAAATCGAAAGTGTTTCTTAGAGCTGGTCAGATGGCAGAATTGGATGCTTATCGAAGTGAGGTCTTAGGGAGGTCTGCTGCCATTATCCAAAGGAAAGTTCGCTCATATTTAGGTCGCAAAAATTTCATTTTGTTGCGATGCTCTGCCATACAAATCCAAACACTGTGTAGAGGACACGTTGCACAACGAATGTTTGACAGCATGAGAAGGGAAGCTGCTTCTACCAAAATCCAGAGACATTGTCTCATGTACCTTGCGAGGAATTATTACCAAAAACAATGCAAATCTGCTGTCTCTATTCAAGCTGGTTTCCGTGGGATGCTTGCTCGTAATGAGCTCAAGTTCAGGAGGCAGACTAGAGCTGCAATTGTGGTTCAGAGTAGATGGCGACAGTACTTGGCACATGTTCAGTATCTGAAGATCAGAAGAGCTGCAATTACCATGCAGTGTGCTTGGAGAGGGAGAGTTGCTCGGAAAGAGCTACGCAAACTTAAAATGGCTGCCAAGGAAACCGGTGCTCTCCAAGCTGCAAAAAATAAGCTGGAAAAGCAAGTGGAAGAACTAACATGGCGCTTGCAACTTGAGAAGCGAATGAGGGGTGACATCGAAGAAGCCAAAACGCAGGAAAATGCAAAATTACAGTGTGTTTTGCAAGAAATACAATCTCAATTTCAAGAAACCAAAGCTCTGCTTGACAAGGAACGGGAAATTGCTAAGGAAGCTGCTGAACAAGTCTCAGTTGTACAGGAGGTTCCAGTTATTGATCATGAACTGATCAGTCAACTTAGTTCAGAAAATGAACAACTTAAGGCTCTGGTAAATTCACTTGAAAAGAAAATCAATGAAACAGAGAAAAAATATGTAGAGTCAAACAAGCTTTGTGAGGAGCGCTTGAAGCTGGCCTTGGAGGCAGAGTCAAAGATAATTGAATTGAAGACAGCCATGCAAAGGCTTGAAGAAAAACTTTTGGACTTGGAAAGCGAGGATCAAATTCGGCGGCAAGCATTGCTGAATTCTCCTGCAAAAACAATGCCAGAGCATTCAGCAGAAACTGCTTCCCATGTTTTTGAAAATGGTTACCTTAATGCAACACCAAGTAAAAAGTTCGGTACGGAGTCGGATGCAAAAATTAGGAGATCTCAAATTGAAAGACAACATGAGAATGTAGATGCTCTAATGAAATGCATAACCAAATATCTTGGATTCAGCGAGGGAAAACCTGTTGCAGCATTTACAGTCTATAAATGTCTTCTCCAGTGGAGGTCATTGGAAGCAGAAAAAACAAGTGTATTTGATCGTCTCATTCAAATTATTGGTTCTGCGATCGAGAATCAGGATAATAATGATCATATGGCATATTGGCTATCCAATACTTCTACACTGCTGTTTTTGCTTCAGAAGAGTTTGAAAGCCACTGGTACGACTGCATCAAGGAAGCCTCCCCCTCCAACATCATTGTTTGGGAGGATGACGCAGGGTTTTCGTTCATCTTCTGCCAACCTTTCAGTTGGTGCCCTTGATGTGGTGCGGCCAGTGGAGGCCAAATATCCAGCATTGCTATTTAAGCAGCAACTCACAGCCTATGTGGAAAAGATGTATGGAATAATCCGAGATAATGTAAAGAAGGAATTGTCTCCTATTCTTTCATCTTGTATCCAGGCACCCAAAGTTTCAAGAGGAAGTGTTACGAAATCATCTGGGCAATCAAATAGCAATAGTCCACCATCTGGTCCTTGGCAATGTATTATTGAGAATCTAGATGGACTTCTTTGTACATTAAAAGATAATTGTGTGCCTACTGTTCTTGTTCAGAAGATATTTACTCAAATCTTCTCATATATAAATGTTCAACTATTTAACGGTCTTCTGCTTCGCCGAGAGAGCTGTACTTTCAGTAGTGGGGAATATGTAAAGTCTGGTTTAGATGAGCTAGAGCTTTGGTGTTCCCAAGCAAAACATGAGTTTGCTGGCTCGTCCTGGGATGAACTCAAACACGTGAGGCAAGCTGTTGGATTCTTGGTTATACACCAGAAGTCTAGAATATCATATGATGATATTACCAATGATCTCTGCCCTATCCTGAGTGTTCAACAGCTTTATAGAATATGCACAGTTTATCGGGATGACAATTATAATACTCGAAGTGTATCGCCTGATGTCATTTCTAGCATGAAGATTCTTATGACCGAGGATTCTACGGAAGACAGCAACTCCTTTCTTTTGGACGACAATTCCAGCATTCCGTTTTCAGTCGATGACATTTCTAGTTCTCTGCAAGAGAAGAGTTTTTCAGATGTCAAACCTCCCGTTGAATTGCTCGAAAATCCCGGCTTCCAATTTTTACAGGACTAA 4503 40.73 MAGQVNLVVGSLVWVEDPEVAWLDGEIVEANGEDVKINCTSGKIIEAKASNIYPKDPEFPSCGVDDMTKLAYLHEPGLLQNLKSRYDINEIYTYTGNILIAVNPFRRLPHLYNNHMMEQYKGAALGELSPHPFAIADSAYRLMINEGTSQSILVSGESGAGKTESTKMLMHYLAFMGGRAGGKSATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPKEDIERYKLGNPKTFHYLNQSNCYNLEGVDDSKEYLVTRNAMDVVGINSDEQDAIFRVVAAILHLGNIEFAKGEEVDSSEPKDDISRFHLTMAAELFMCDEKSLEDSLCKRVIVTRDETITKCLDPESATVSRDALAKIVYSRLFDWIVNKINNSIGQDPDSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLLEKKPGGVIALLDEACMFPRSTYETFAQKLYQTFKDHKRFSKPKLSLSDFTICHYAGDVTYQTEHFLDKNKDYVVAEHQALLSASTCSFVSGLFPPLPEESSKSSKFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPSMFENHNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFVGRFSILAPDILIGSCEEVSACKRLLEKVDLKGYQIGKSKVFLRAGQMAELDAYRSEVLGRSAAIIQRKVRSYLGRKNFILLRCSAIQIQTLCRGHVAQRMFDSMRREAASTKIQRHCLMYLARNYYQKQCKSAVSIQAGFRGMLARNELKFRRQTRAAIVVQSRWRQYLAHVQYLKIRRAAITMQCAWRGRVARKELRKLKMAAKETGALQAAKNKLEKQVEELTWRLQLEKRMRGDIEEAKTQENAKLQCVLQEIQSQFQETKALLDKEREIAKEAAEQVSVVQEVPVIDHELISQLSSENEQLKALVNSLEKKINETEKKYVESNKLCEERLKLALEAESKIIELKTAMQRLEEKLLDLESEDQIRRQALLNSPAKTMPEHSAETASHVFENGYLNATPSKKFGTESDAKIRRSQIERQHENVDALMKCITKYLGFSEGKPVAAFTVYKCLLQWRSLEAEKTSVFDRLIQIIGSAIENQDNNDHMAYWLSNTSTLLFLLQKSLKATGTTASRKPPPPTSLFGRMTQGFRSSSANLSVGALDVVRPVEAKYPALLFKQQLTAYVEKMYGIIRDNVKKELSPILSSCIQAPKVSRGSVTKSSGQSNSNSPPSGPWQCIIENLDGLLCTLKDNCVPTVLVQKIFTQIFSYINVQLFNGLLLRRESCTFSSGEYVKSGLDELELWCSQAKHEFAGSSWDELKHVRQAVGFLVIHQKSRISYDDITNDLCPILSVQQLYRICTVYRDDNYNTRSVSPDVISSMKILMTEDSTEDSNSFLLDDNSSIPFSVDDISSSLQEKSFSDVKPPVELLENPGFQFLQD 1500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38379705 38392070 - Bma015443.2 Bma02g00742 77992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00742 1500 Gene3D Kinesin motor domain 65 666 IPR036961 -
Bma02g00742 1500 ProSiteProfiles IQ motif profile. 762 791 IPR000048 GO:0005515
Bma02g00742 1500 SMART iq_5 809 831 IPR000048 GO:0005515
Bma02g00742 1500 SMART iq_5 834 856 IPR000048 GO:0005515
Bma02g00742 1500 SMART iq_5 857 879 IPR000048 GO:0005515
Bma02g00742 1500 SMART iq_5 786 808 IPR000048 GO:0005515
Bma02g00742 1500 SMART iq_5 738 760 IPR000048 GO:0005515
Bma02g00742 1500 SMART iq_5 761 783 IPR000048 GO:0005515
Bma02g00742 1500 Coils Coil 934 954 - -
Bma02g00742 1500 Coils Coil 1018 1045 - -
Bma02g00742 1500 PANTHER MYOSIN 6 1498 - -
Bma02g00742 1500 Coils Coil 881 915 - -
Bma02g00742 1500 Gene3D Myosin VI head, motor domain, U50 subdomain 316 605 - -
Bma02g00742 1500 Pfam Myosin N-terminal SH3-like domain 10 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bma02g00742 1500 Pfam IQ calmodulin-binding motif 836 855 IPR000048 GO:0005515
Bma02g00742 1500 Pfam IQ calmodulin-binding motif 859 879 IPR000048 GO:0005515
Bma02g00742 1500 Pfam IQ calmodulin-binding motif 763 780 IPR000048 GO:0005515
Bma02g00742 1500 Pfam IQ calmodulin-binding motif 741 759 IPR000048 GO:0005515
Bma02g00742 1500 Pfam IQ calmodulin-binding motif 789 808 IPR000048 GO:0005515
Bma02g00742 1500 Pfam IQ calmodulin-binding motif 812 831 IPR000048 GO:0005515
Bma02g00742 1500 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00742 1500 PRINTS Myosin heavy chain signature 433 461 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00742 1500 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00742 1500 PRINTS Myosin heavy chain signature 200 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00742 1500 PRINTS Myosin heavy chain signature 486 514 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00742 1500 CDD MyosinXI_CBD 1100 1469 IPR037975 GO:0007015
Bma02g00742 1500 Pfam Myosin head (motor domain) 64 724 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00742 1500 ProSiteProfiles IQ motif profile. 810 839 IPR000048 GO:0005515
Bma02g00742 1500 ProSiteProfiles IQ motif profile. 835 864 IPR000048 GO:0005515
Bma02g00742 1500 ProSiteProfiles Dilute domain profile. 1149 1447 IPR002710 -
Bma02g00742 1500 CDD MYSc_Myo11 76 724 IPR036018 -
Bma02g00742 1500 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bma02g00742 1500 Pfam DIL domain 1323 1426 IPR002710 -
Bma02g00742 1500 Coils Coil 976 1010 - -
Bma02g00742 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 790 IPR027417 -
Bma02g00742 1500 Gene3D - 443 627 - -
Bma02g00742 1500 ProSiteProfiles Myosin motor domain profile. 62 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00742 1500 Gene3D - 256 314 - -
Bma02g00742 1500 Gene3D - 671 734 - -
Bma02g00742 1500 ProSiteProfiles IQ motif profile. 787 816 IPR000048 GO:0005515
Bma02g00742 1500 ProSiteProfiles IQ motif profile. 858 887 IPR000048 GO:0005515
Bma02g00742 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 790 887 IPR027417 -
Bma02g00742 1500 SMART DIL_2 1322 1429 IPR002710 -
Bma02g00742 1500 SMART MYSc_2a 56 737 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00742 1500 Gene3D - 789 837 - -
Bma02g00742 1500 Gene3D - 739 788 - -
Bma02g00742 1500 Gene3D - 838 886 - -
Bma02g00742 1500 PANTHER MYOSIN-7 6 1498 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00742 Bma-Chr2:38379705 Bma09g00494 Bma-Chr9:40977153 0 dispersed
Bma02g00742 Bma-Chr2:38379705 Bma09g00523 Bma-Chr9:41799897 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00742 K10357 - jre:108980231 2409.79