Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00744 ATGGATTCTCCCCCATGTTCTTCCCAACTCACCCTCCTTTTTGGCCTCAACCTCACTGACCCTGCTGCTGCCGCCGCTTTCATCTGTGACAACTTTTCCGACACCCGGTATGCCGTCGACACCACCTACCTTCTCTTCTCCGCCTACCTCGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGCGCTGGCTCTGTCCGGGCTAAAAACACTACGAACATCATGCTCACTAACGTTCTCGACGCTGCCGCCGGTGGTATATTCTACTACCTTTTCGGTTACGCTTTCGCCTTTGGATCCCCTTCCAATGGCTTCATTGGCCACCACTTTTTTGCCCTCAAATCATTCCCCTCCCCCTCCTCAGACTACAGTAACTTTCTCTACCAATGGGCTTTTGCAATCGCCGCTGCCGGGATCACCAGCGGCTCCATCGCCGAGCGCACACAGTTCGTTGCTTACTTGATTTACTCTTCTTTCTTGACGGGGTTCGTCTATCCAGTAGTATCTCACTGGTTCTGGTCCGGCGACGGCTGGGCCAGCGCTGTCAAATCCGACGGAGACTTTCTGTTTGGGACTGGAGTCCTTGATTTCGCTGGCTCCGGCGTCGTCCACATGGTTGGCGGAATTGCCGGACTATGGGGAGCTCTGATTGAAGGTCCTCGAATCGGACGGTTCGACCACTCCGGCCGATCGGTAGCTCTCCGAGGCCACAGTGCCTCTTTGGTCGTTCTCGGCACATTTTTGCTTTGGTTTGGGTGGTACGGGTTCAACCCAGGTTCGTTCACAAAAATCCTTAGCCCTTATACTCCCGGTGGCTTCTACGGGCAGTGGAGTGCAGTAGGCAGGACCTCTGTGACAACGACTCTCGCCGGATGTACTGCTGCGCTGACAACACTTTTCGGGAAAAGAATACTCTCTGGCCACTGGAACGTTACCGACGTTTGTAACGGGCTACTCGGCGGGTTCGCGGCCATAACTTCCGGGTGCTCAGTGGTGGAACCATGGGCAGCCATTATTTGCGGATTCGTGGCATCTTTAGTTCTGATCAGCTGCAACAAATTGGCGGAGAAGGTCAAATACGACGACCCACTGGAGGCGGCTCAGCTTCACGGAGGATGTGGAGCGTGGGGACTAATTTTCACGGCCTTGTTCGCGACAGAGAAGTACGTGACCGAAGTGTACCCGGGAAAACCGGGTCGACCGTACGGGCTGTTGATGGGTGGGGGAGGGAAGCTATTGGCAGCCCATTTGATCCAAATAGTGGTGATAATTGGGTGGGTGAGCGCGACGATGGGTCCCCTTTTCTTTGCAATGCATAAGCTAAAGCTGCTTCGGATATCCGGGGAGGATGAAATGGCGGGCATGGATCTGACCCGACATGGAGGATTTGCTTACATTTACCACGACGAAGATGACTTGCAAAAGCATGGGATCCGGATGAGGAAAATAGAACCAAGTTCTACTACAGCATCTACTGCAAATAGTATTTGA 1491 53.86 MDSPPCSSQLTLLFGLNLTDPAAAAAFICDNFSDTRYAVDTTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTTNIMLTNVLDAAAGGIFYYLFGYAFAFGSPSNGFIGHHFFALKSFPSPSSDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGDGWASAVKSDGDFLFGTGVLDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGRSVALRGHSASLVVLGTFLLWFGWYGFNPGSFTKILSPYTPGGFYGQWSAVGRTSVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAIICGFVASLVLISCNKLAEKVKYDDPLEAAQLHGGCGAWGLIFTALFATEKYVTEVYPGKPGRPYGLLMGGGGKLLAAHLIQIVVIIGWVSATMGPLFFAMHKLKLLRISGEDEMAGMDLTRHGGFAYIYHDEDDLQKHGIRMRKIEPSSTTASTANSI 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 38467196 38468686 - Bma015446.1 Bma02g00744 77994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00744 496 Gene3D Ammonium transporter AmtB like domains 17 484 IPR029020 -
Bma02g00744 496 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 6 488 - -
Bma02g00744 496 TIGRFAM amt: ammonium transporter 40 465 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bma02g00744 496 Pfam Ammonium Transporter Family 43 465 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bma02g00744 496 ProSitePatterns Ammonium transporters signature. 196 221 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bma02g00744 496 PANTHER AMMONIUM TRANSPORTER 6 488 - -
Bma02g00744 496 SUPERFAMILY Ammonium transporter 37 446 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00744 Bma-Chr2:38467196 Bma14g01220 Bma-Chr14:18758158 0 dispersed
Bma02g00744 Bma-Chr2:38467196 Bma10g00389 Bma-Chr10:3828980 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00744 K03320 - jre:109010430 814.298