Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00760 ATGATTAAGTGCATCTGTCCAGGAAATCAACTAGAAGTTGATGAAATGGATCATTCATCCAAGTCTCTGCCAACGAGAGACTATTCTGCCAGCATTTTTTCGTCTCGAACTGTAAAGATGGAAACAAGGGCAGAGACTAGCAACATCGAAGAAGCTGAGTCGACTCTTCGTGAGAGTGATTATCTCAACTATGAGGAAGCGAGAGCTTTACTTGGAAGGCTTGAGCATCAAAAAGGAAACATAGAAGCTGCTCTCCAAGTGTTTGAAGGAATAGATATCACTGCAGTGACTCCTAGGATCAGAGTTGCTATTTCTAGAAGATGTGAACAAAATAATAGATCGTATTCACAAAGTGATGCTGCTCCGCTTATGTCCATGCATGCTGTTAGTTTATTACTCGAAGCTGTTTTTCTTAAATCTAAATCATTGCAAAGTCTAGGTCGATTCGCAGAGGCAGCTAAATCTTGCTTAGTTGTTTTGGATACCGTTCAATCTGCATTGCCAGAAGGCTTGCCTGAAAACTTTGCTATAGATTGTAAATTACAAGAGATTTTAACAAAGGCTATCGAGTTGCTTCCCAAGTTATGGCAATCAGCGGGCTCTCTCCAAGAATGTATCTTGTCATACAGACGGGCTCTCCTCTATCGATGGAATCTCGATATTAAAACCAGTTCAAAGATAGAAAAAGAATTTGCAATCTTTCTTCTTTACAGTGGTTTCGATACGAACCCTCCCAATCTTTGTTCACAGATGGAAAGCTCTTTTGTGCCCAAAAACAACATAGAAGAGGCAGTTCTTTTGTTATTAATTCTCATGAGAAAATATTTCCTTGGAAGAATTGAGTGGGATCCCTCCATCCTTGAGCATCTTACATTTGCTCTCTCTATTTCAGGAGAATTACTATCTTTGGCACATCAAGTTGAGCAGTTGTTTCCAGGAATTGTAGCAAGAAAAGAAAAATATCACATAGTAGCTCTCTGTTTCTATGGCGAAGGTGAATGTGTCGTTGCTTTGAATCTCTTAAAAAATTTTCTGAACTACAGAGAAATTCCTGACTGTATGCTGCAGTTATTGTTGGCTTCAAAAATATGTGCTGAGAATTCACTCTGTATTGATGAAGGGATCAGATTTACTCGACAAGCAATTTCGATGATGCATGGAAAATGCTCTCAAATGGTATCTGTGGCGACTTGCTTACTTGGAGTCTTATTATCAGCTGAATCGAGATCAGTTGTTTCGGATTCTGAGAGGAATTCGAAGCGGGCAGAAGCACTTGAGGCCTTACAAACCGCCGAAAAGACAATGAGTGAAAAAGACCCATACATTGTGTTTCATCTTGGTCTTGAACTTGCTGATCAGAGGAAATTGGATTTGGCTCTATATTTTGCCAAGCAATTGCTTAAACTTGAGGCTGGGACGAATATTAGAGGGTATAGTCTTTTGGCACGAATATTGTCTGCTCAAAAACGATTTGCAGATGCTGAGACTGTATTGAATGCCTCTCTTGATCAGACTGAGAAGTGGGAACAAGTGGAATTGTTAAGAACGAAAGCTAAACTCCAGATTGCGCAGGGCCAGGCGAAGAAGTTTATCGAGACATGTACTCATCTTTTAGCCGCTCTTCAAGTTCAGACCAAAAATATTGATTTTATGAACAAGCTCACCAAGAAAAAGAGCAGCCATGATAGAAGACTGGAAATGGAAATATGGCATGATTTAGCCAATATATACACAAGCTTATCTCAATGGCGGAATGCAGAAGTCTGTCTTTCAAAGTCTGAAGCCATCAATCCTTATTCTGCTTCAAGATGGCACTCCATGGGTTTGTTATACGAGGCTAAAGGCCTTGATCAAGAGGCTCTGATAGCATACAAAAAAGCCTTGGATGTGGAAGCCACCCATGTCCCGAGCTTGATCTCTGCTGCCTGCGTGCTCAGACGGCATGGAAGTCAATGCTTGGCTGTTGTGAGAAGCCTACTGGGCTATGCCCTCCGACTCGACCCATCAAATCCCACTGCTTGGTATAATCTTGGGCTTGCATACAAGTCTAGTGAGGGAGCATCGGCCATGGAGGTTGCCGAGTGCTTCCAGGCTGCAGCTCTTCTCGAAGAATCTGCACCAGTTGAACCCTTTAGATGA 2139 41.7 MIKCICPGNQLEVDEMDHSSKSLPTRDYSASIFSSRTVKMETRAETSNIEEAESTLRESDYLNYEEARALLGRLEHQKGNIEAALQVFEGIDITAVTPRIRVAISRRCEQNNRSYSQSDAAPLMSMHAVSLLLEAVFLKSKSLQSLGRFAEAAKSCLVVLDTVQSALPEGLPENFAIDCKLQEILTKAIELLPKLWQSAGSLQECILSYRRALLYRWNLDIKTSSKIEKEFAIFLLYSGFDTNPPNLCSQMESSFVPKNNIEEAVLLLLILMRKYFLGRIEWDPSILEHLTFALSISGELLSLAHQVEQLFPGIVARKEKYHIVALCFYGEGECVVALNLLKNFLNYREIPDCMLQLLLASKICAENSLCIDEGIRFTRQAISMMHGKCSQMVSVATCLLGVLLSAESRSVVSDSERNSKRAEALEALQTAEKTMSEKDPYIVFHLGLELADQRKLDLALYFAKQLLKLEAGTNIRGYSLLARILSAQKRFADAETVLNASLDQTEKWEQVELLRTKAKLQIAQGQAKKFIETCTHLLAALQVQTKNIDFMNKLTKKKSSHDRRLEMEIWHDLANIYTSLSQWRNAEVCLSKSEAINPYSASRWHSMGLLYEAKGLDQEALIAYKKALDVEATHVPSLISAACVLRRHGSQCLAVVRSLLGYALRLDPSNPTAWYNLGLAYKSSEGASAMEVAECFQAAALLEESAPVEPFR 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39226439 39229296 - Bma015467.1 Bma02g00760 78010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00760 712 SUPERFAMILY TPR-like 421 527 IPR011990 GO:0005515
Bma02g00760 712 Pfam Tetratricopeptide repeat 450 517 - -
Bma02g00760 712 PANTHER OS10G0471400 PROTEIN 1 712 - -
Bma02g00760 712 PANTHER PROTEIN NPG1 1 712 IPR043376 -
Bma02g00760 712 Coils Coil 64 84 - -
Bma02g00760 712 Pfam Tetratricopeptide repeat 602 632 IPR019734 GO:0005515
Bma02g00760 712 SUPERFAMILY TPR-like 567 683 IPR011990 GO:0005515
Bma02g00760 712 Gene3D Tetratricopeptide repeat domain 554 708 IPR011990 GO:0005515
Bma02g00760 712 Gene3D Tetratricopeptide repeat domain 112 553 IPR011990 GO:0005515
Bma02g00760 712 SMART tpr_5 567 600 IPR019734 GO:0005515
Bma02g00760 712 SMART tpr_5 601 634 IPR019734 GO:0005515
Bma02g00760 712 SMART tpr_5 440 473 IPR019734 GO:0005515
Bma02g00760 712 SMART tpr_5 475 508 IPR019734 GO:0005515
Bma02g00760 712 ProSiteProfiles TPR repeat profile. 601 634 IPR019734 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g00760 Bma06g01610 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00760 Bma-Chr2:39226439 Bma07g01074 Bma-Chr7:43211408 0 dispersed
Bma01g02245 Bma-Chr1:79593859 Bma02g00760 Bma-Chr2:39226439 0 transposed
Bma02g00760 Bma-Chr2:39226439 Bma06g01610 Bma-Chr6:52269087 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00760 K21843 - qsu:112015183 1016.91