Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00766 ATGGCTCCTACTCCGAAATCTAACTATTCCCAGTTGAAGACGCCTCAATCCAAGCGACTCAATTTTAACTCTACCAAAGTCCAACCCTCGCCTAATCCGATCTTGGCTTTCAAAGATTCTCAGCCGGAACATCCAGTTGAAGTCATCGGTCGAATTCGTGATTATCCGGACAGAAAAGAAAAGCCCCAATCGGTTTTGCATGTTAACACGGAGCAGAATAGTGTTAGGGTTCGTGCCGACGTGGGGTATCGCGATTTCAGTCTTGATGGGATTTCTCAATCAGAAGAAGAAGATCTTGATAGCTTCTACAAAAAGTTCGTCCAATCAAGAATCAATGGCGTTAAAGTGGGGGATAAATGCACCATAATGACGTATGGGCCAACGGGTTCAGGAAAAAGCCACACCATGTTTGGCTGTTCAAAGCAACCCGGAATCGTTTATAGGTCTCTAAGGGACATTTTGGGAGATGAATGTGAAGAAAATGATTCAACTAGTGAGCGTGTTGGCCTTGGGACGTTTGTACAAGTAACAGTTTTGGAGATTTATAATGAGGAAATCTATGATCTTCTTACAAACTCAAGCTCTAATGGCGGAGGATTAAGCGTTGGATTGCCTAAGGGCAGTGCATCGAAGGTGAGGCTTGAAGTAATGGGGAAAAAGGCAAAGAACGCGACCTATATGTCGGGAAATGAAGCTGGAAAAATTTCCAAAGAGATTCAGAAAGTGGAGAAGAAGAGGATTGTTAAAAGCACACTCTGTAATGACAGAAGTTCTCGGAGCCATTGCATGATAATCCTTGATGTCCCCACGGTGGGAGGACGGTTAATGCTTGTTGACATGGCCGGTTCCGAGAATATTGAGCAAGCCGGTCAAGGTGGATTTGAGGCAAAAATGCAGACAGCAAAGATTAACCAAGGAAACACAGCATTGAAAAGAGTCGTTGAATCCATCGCAAACGGAGACTCTCATGTTCCCTTCCGAGATAGCAAATTGACCATGCTTCTGCAGGATTCCTTTGAGGATGACAAGTCCAAAATTTTAATGATCTTGTGTGCCAGTCCTGATCCCAAGGAGATACACAAGACAATTTCAACCCTTGAATATGGTGCAAAAGCAAAATGCATTGTCCGAGGTCTGGGGACAACGATGAAGGATAAAAATGGTGCAGAAGATTCCTCATCTACTGTCATTTTGGGATCAAGGATTCAGGCTATGGATGAGTTTATCTATAAGTTACAACAAGATAAAACGCTTATAGAGAAAGAGAGAAACGCAGCTCAGAAAGAGCTCTTAAGGAAAGAAAAGGAAATTGCAGAACTGAAGGTTAAACTTGAGAGAATGGAAGGGAAGAGTGGATCTGGGAAAAGTGAAGAAGAGATCATTTCAAAGGTGAATGAGCAGACCCAGATTCTGAAACTTGAGTTGGAAAAGAAGATGAAGAGATGCCAGAGAATTGCAAATGATTTTGTTGATTTGGAGAGGAGAAGAATGGAGGAATGGATACTTCAACAGCAGAATGGCGTTGAAATGCTTAGACGGCGACTAGAAGAAGTTGAGTATGAACTTTGTCGTACTAGGGATGCAAATGGCGATGGAATTCGATCAAGTGTTGATGGAAATAGGCTGGCTAGAAGGTTGATGGGAATCTATGCCAGTGGAGATGGAGGGATGGTTAAATCGATGGAATTGGACATGGATGATCAAGAACCATCTTGTAGAGAGATTAAACTTGTGGGTGGAGGATTTTATCAGCCCAGCGATAACGGCATCAATGGCTTCTTGAACAAACTTAACGAGGCCGAGAATGACTCTCTCACGCCAAACTTTGAAGACAGAGTTCGTCTTAGTACTGTATTTGAAGAAGAAGAAGAGGAAGAGAAAGAAGTTATAGAGGAAAAGAAGGTATGTACTGTTAAAGACTCCTCGAAAATAACTCAAAATCTAGACGAAGATGATCGTTCAGAGGAAAATTCCGAGGCTTCCGTGGGATTTATAAGCAATCCTCGAAGTTCCAAAGAGGTTAAATCTTTCAGAAAACTGAAAATTCAAAATATATTCACACTTTGTGGAAACCAAAGAGAACTGTCTCAACAAGTAAGAATTCCTGGAAGATATAGGTTTGAAAATGTTGATCCTCAGTTTTCTCCTCTCAAGATTATTGGCGAAGTGGAAAATGATGTGCCTATGCCAGAGCATAATGACCAAATAATAAAAACTGATACAACAGTGAAGCCAGTTGTGCCAGTGAAGGAAGAAGAAATTCAGACTTGTAGTCAATTGAAGAGTCTGTCATCAGACTATAAGGAGAACTACAACCCATTATCAATTCACACCACTGACCAACACATCCAAGTTCATGTGAAATGGGAAGACTCGAAAGAAAATCCTGGGAACACCATTGCACCACCCCTCAAGGTTTTGAAAACTGCAAGCCTTGCCGATCTGCGGAAGCTTATTGAAATCTACGTCGATGCCGACTGTGAAGGATTCTCTTTTGTGGCAGTTGGGGATCTCAGTGGAGGAGTTATCCCAAGAGAGAAGGAAGGAACATCACAGGCTATCATCAAACTTCCAAGTTTTGATAATCATTCAAATGGCTTCCTCGCTTGCTTGCGACCCGTGAAGCATCAGCAGAGCCCTGCTTTTGATCTCCCATTGGCGGCTTCCCTACCGTTGAGCCCCATTGAAAATATATCCTCCCGCTTGATGAAACAACAAGATAACTCTCTATCACCAAAACTAGGAGCCAACTTGAATTCTCTTGCCTATATTTCGGTACGAAGACACTGA 2790 42.4 MAPTPKSNYSQLKTPQSKRLNFNSTKVQPSPNPILAFKDSQPEHPVEVIGRIRDYPDRKEKPQSVLHVNTEQNSVRVRADVGYRDFSLDGISQSEEEDLDSFYKKFVQSRINGVKVGDKCTIMTYGPTGSGKSHTMFGCSKQPGIVYRSLRDILGDECEENDSTSERVGLGTFVQVTVLEIYNEEIYDLLTNSSSNGGGLSVGLPKGSASKVRLEVMGKKAKNATYMSGNEAGKISKEIQKVEKKRIVKSTLCNDRSSRSHCMIILDVPTVGGRLMLVDMAGSENIEQAGQGGFEAKMQTAKINQGNTALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGLGTTMKDKNGAEDSSSTVILGSRIQAMDEFIYKLQQDKTLIEKERNAAQKELLRKEKEIAELKVKLERMEGKSGSGKSEEEIISKVNEQTQILKLELEKKMKRCQRIANDFVDLERRRMEEWILQQQNGVEMLRRRLEEVEYELCRTRDANGDGIRSSVDGNRLARRLMGIYASGDGGMVKSMELDMDDQEPSCREIKLVGGGFYQPSDNGINGFLNKLNEAENDSLTPNFEDRVRLSTVFEEEEEEEKEVIEEKKVCTVKDSSKITQNLDEDDRSEENSEASVGFISNPRSSKEVKSFRKLKIQNIFTLCGNQRELSQQVRIPGRYRFENVDPQFSPLKIIGEVENDVPMPEHNDQIIKTDTTVKPVVPVKEEEIQTCSQLKSLSSDYKENYNPLSIHTTDQHIQVHVKWEDSKENPGNTIAPPLKVLKTASLADLRKLIEIYVDADCEGFSFVAVGDLSGGVIPREKEGTSQAIIKLPSFDNHSNGFLACLRPVKHQQSPAFDLPLAASLPLSPIENISSRLMKQQDNSLSPKLGANLNSLAYISVRRH 929
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 39716341 39719957 + Bma015476.1 Bma02g00766 78016

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00766 929 Coils Coil 409 450 - -
Bma02g00766 929 MobiDBLite consensus disorder prediction 1 40 - -
Bma02g00766 929 MobiDBLite consensus disorder prediction 1 35 - -
Bma02g00766 929 ProSiteProfiles Kinesin motor domain profile. 45 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00766 929 Gene3D Kinesin motor domain 26 378 IPR036961 -
Bma02g00766 929 MobiDBLite consensus disorder prediction 645 664 - -
Bma02g00766 929 PANTHER KINESIN-LIKE PROTEIN KIN-10A 18 757 - -
Bma02g00766 929 Pfam Kinesin motor domain 69 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00766 929 Coils Coil 501 521 - -
Bma02g00766 929 PANTHER KINESIN-RELATED 18 757 IPR027640 GO:0003777|GO:0007018
Bma02g00766 929 PRINTS Kinesin heavy chain signature 117 138 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00766 929 PRINTS Kinesin heavy chain signature 251 268 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00766 929 PRINTS Kinesin heavy chain signature 324 345 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00766 929 PRINTS Kinesin heavy chain signature 274 292 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00766 929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 375 IPR027417 -
Bma02g00766 929 SMART kinesin_4 43 383 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00766 929 Coils Coil 475 495 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00766 - - K10398 qsu:112036070 1018.84
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00766 Bma-Chr2:39716341 Bma07g00328 Bma-Chr7:4274710 8.70E-33 dispersed
Bma02g00766 Bma-Chr2:39716341 Bma09g00143 Bma-Chr9:4891024 4.61E-31 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g734 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma02g00766 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006035 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 5 2 1 1 1 1 1 1 1 1 2 1 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma02g00766 Bma_Chr02 FPKM 1.541832 1.48371 0.0 0.839491 0.489974 0.665708 0.0 0.595256 1.436523 1.260233