Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00821 ATGCCCATGAGGCAGATGAAAGAGAGCTCGGAGAAGCACCTTGTAATCAAAACCCACTTCCAAAACTCCATGAACACACCTCAGAAATCTCCTCAAACCGCCCAAAACGGGAAAGGTCCTCCCCACATTGAAACTCAGAACACCAAGTGCCAAAACCAAGCTTCTCCACCGACGAAAAACAGGGGAAGAAGAAGGGGAAGAGGAGGCCGGAAATCCGACCAGGGAGAGGTTTATCTCCGGCCAAGCTCTCGTCACTGTACGGAGGCGCATACCCCACCGGAGCCTTCGCCACCTGACGGTGGCAACTTGTGTGAAACGGCTATGGGTTTTCCTAATTCGAGCAAAGCTTTGAATTTTGCTTCTAGGCCTGGCCAAGGGCAACTCGGAACGAAGTGCATTGTAAAGGCCAACCATTTTGTTGCAGAGTTACCAGAGAAGGACTTGAATCAATACGATGTGAGTATAACTCCTGAAGTGACATCAAGAACTGTAAACAGAGCTATAATGGCTGAGCTGGTTCGATTATACAAAGCTTCTGAATTGGGAATGAGATTACCTGCTTACGATGGAAGAAAGAGTTTATACACAGCTGGGGAGCTTCCCTTTGTTAGGAAAGAGTTTAATATTAAACTAATCGATGAAGAGAACGGAATCAACTGTCCGAAGAGGGAAAGACAATATAAAGTCGTGATTAAATTTGTTGCCCGTGCCAACTTGCATCATTTGAGACAGTTCTTAGATGGTAAGCGGGCAGATGCTCCTCAAGAAGCTTTGCAAATACTCGACATTGTATTAAGAGAGCTGTCGATCAAAAGGTTCTGTCCCGTCGGGAGGTCTTTCTTTTCGCGTGATATTAGATTGCCTCAGCGACTTGGCGATGGCTTGGAATCATGGTGTGGGTTTTACCAGAGTATAAGGCCTACTCAGATGGGCTTGTCACTTAATATTGATATGGCATCAGCTGCATTTATTGAACCTCTCCCTGTGCTTGAGTTCGTCGGCCAGCTTCTCAGCAAGGATGTTCTGTCAAGGCCATTATCTGATTCTGATCGTGTGAAGATTAAGAAGGCTTTAAGAGGAGTGAAAGTTGAAGTTACACACAGGGGAAATGTACGACGAAAGTATCGTGTTTCGGGATTGACATCTCAACCTACCCGGGAACTCGTCTTTCCAGTTGATGATAAGTCAACCATGAAGTCGGTTGTTGAATACTTCCAGGAAATGTATGGATTCACCATCCAGCATGGACATCTCCCCTGTCTTCAAGTAGGAAATCAAAAGAAGGCTAATTATTTGCCGATGGAGGCCTGCAAAATTGTTGAAGGTCAACGTTATACGAAAAGACTAAACGAGAGGCAGATCACTGCACTCCTGAAAGTTACCTGCCAAAGACCGAGGGATCGAGAAAATGACATTCTTCAGCAGACTGTTCAACATAATAACTATGATCAAGATCCTTACGCCAAGGAATTTGGTATGAAAATCAGTGAAAAGTTAGCTTCTGTCGAGGCCCGAATACTTCCTGCCCCTTGGCTTAAATACCATGAGACTGGCAAGGAAAAGGATTGTTTGCCTCAAGTTGGCCAGTGGAATATGATGAACAAGAAAATGATTAATGGGATGACTGTCAGCCGGTGGGCATGCATTAACTTTTCCAGGAGTGTGCAAGAAAGTGTAGCTCGTGGATTTTGTAATGAATTGGCTCAAATGTGTCAAGTCTCTGGAATGGAATTTAATCCAGAGCCTGTCATTCCAATATACAATGCTCGGCCCGACCAAGTGGAGAAAGCATTGAAGCATGTTGTCCATGCTTCCATGAACAAAACTAAAGGAAAAGAGTTAGAGCTATTATTAGCCATTTTGCCGGACAACAATGGTTCACTCTATGGTGATCTGAAGCGAATTTGTGAGACCGGTCTTGGTTTAATATCTCAGTGTTGTCTTACGAAACACGTGTTTAAGATCAGCAAGCAGTACTTAGCAAACGTGTCATTGAAGATCAATGTCAAGATGGGAGGTAGAAACACAGTTCTTCTTGATGCTATCAGCTGCAGAATACCTTTAGTGAGTGACATACCAACCATAATATTTGGAGCTGATGTAACTCACCCTGAGAATGGAGAAGATTCTAGCCCTTCTATCGCTGCCGTTGTAGCCTCACAAGATTGGCCAGAAGTCACTAAATATGCCGGACTTGTTTGTACTCAAGCCCACAGGCAAGAACTCATTCAAGACTTGTACAAAACATGGCACGATCCTGTCCGGGGTACAGTTAGTGGTGGCATGATCAGGGACCTTCTGGTTTCCTTCAGGAAGGCAACGGGGCAGAAGCCGTTGAGGATAATATTTTACAGCAGGGACGGTGTAAGCGAGGGTCAGTTTTATCAAGTCTTACTTTATGAGTTAGATGCAATCAGGAAGGCTTGTGCATCGCTAGAACCGAATTATCAACCCCCTGTAACATTTATAGTAGTGCAAAAGCGACACCATACTCGACTCTTTCCCAACAACCATAGAGATCGAAGTAGCACCGACAAGAGCGGAAATATTTTGCCAGGCACTGTGGTTGATTCTAAGATATGCCATCCTACAGAATTTGATTTCTACCTTTGCAGCCATGCTGGTATCCAGGGAACTAGTCGGCCAGCTCATTACCACGTTCTTTGGGACGAGAACAATTTCACGGCGGATGGAATTCAATCGTTGACGAACAATCTATGCTACACGTACGCAAGGTGTACTCGTTCTGTTTCTGTAGTTCCTCCTGCATATTATGCACATCTAGCCGCATTTCGGGCGCGGTTTTACTTAGAGCCGGAGATGCTAGAAAACGGGTCGAGTAATCATTCGACCAAAATGACTCGACCCGCAGGAGAGTTGGGAGTTCGACCGTTGCCGGCTTTGAAGGAGAACGTGAAGAGAGTCATGTTTTATTGC 2937 45.01 MPMRQMKESSEKHLVIKTHFQNSMNTPQKSPQTAQNGKGPPHIETQNTKCQNQASPPTKNRGRRRGRGGRKSDQGEVYLRPSSRHCTEAHTPPEPSPPDGGNLCETAMGFPNSSKALNFASRPGQGQLGTKCIVKANHFVAELPEKDLNQYDVSITPEVTSRTVNRAIMAELVRLYKASELGMRLPAYDGRKSLYTAGELPFVRKEFNIKLIDEENGINCPKRERQYKVVIKFVARANLHHLRQFLDGKRADAPQEALQILDIVLRELSIKRFCPVGRSFFSRDIRLPQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVLEFVGQLLSKDVLSRPLSDSDRVKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDKSTMKSVVEYFQEMYGFTIQHGHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNERQITALLKVTCQRPRDRENDILQQTVQHNNYDQDPYAKEFGMKISEKLASVEARILPAPWLKYHETGKEKDCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQESVARGFCNELAQMCQVSGMEFNPEPVIPIYNARPDQVEKALKHVVHASMNKTKGKELELLLAILPDNNGSLYGDLKRICETGLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCTQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYSRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFPNNHRDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYLEPEMLENGSSNHSTKMTRPAGELGVRPLPALKENVKRVMFYC 979
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 44708823 44714343 + Bma030906 Bma02g00821 78071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00821 979 Pfam N-terminal domain of argonaute 131 265 IPR032474 -
Bma02g00821 979 MobiDBLite consensus disorder prediction 16 59 - -
Bma02g00821 979 MobiDBLite consensus disorder prediction 1 15 - -
Bma02g00821 979 Pfam Argonaute linker 1 domain 275 324 IPR014811 -
Bma02g00821 979 SUPERFAMILY PAZ domain 321 482 IPR036085 GO:0005515
Bma02g00821 979 Gene3D paz domain 320 445 - -
Bma02g00821 979 MobiDBLite consensus disorder prediction 1 102 - -
Bma02g00821 979 Gene3D - 506 679 - -
Bma02g00821 979 SMART Piwi_a_2 616 938 IPR003165 GO:0003676
Bma02g00821 979 SMART PAZ_2_a_3 327 463 IPR003100 GO:0005515
Bma02g00821 979 Pfam Mid domain of argonaute 525 601 IPR032473 -
Bma02g00821 979 SUPERFAMILY Ribonuclease H-like 606 938 IPR012337 -
Bma02g00821 979 PANTHER PROTEIN ARGONAUTE 10 60 978 - -
Bma02g00821 979 SMART DUF1785_2 274 326 IPR014811 -
Bma02g00821 979 ProSiteProfiles PAZ domain profile. 327 441 IPR003100 GO:0005515
Bma02g00821 979 ProSiteProfiles Piwi domain profile. 616 938 IPR003165 GO:0003676
Bma02g00821 979 CDD PAZ_argonaute_like 326 440 - -
Bma02g00821 979 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 60 978 - -
Bma02g00821 979 CDD Piwi_ago-like 486 937 IPR045246 -
Bma02g00821 979 Pfam Piwi domain 617 936 IPR003165 GO:0003676
Bma02g00821 979 Pfam PAZ domain 353 456 IPR003100 GO:0005515
Bma02g00821 979 Gene3D - 685 979 IPR036397 GO:0003676
Bma02g00821 979 Pfam Argonaute linker 2 domain 467 514 IPR032472 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g00821 Bma06g01574 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00821 Bma-Chr2:44708823 Bma08g00120 Bma-Chr8:1483433 0 dispersed
Bma02g00821 Bma-Chr2:44708823 Bma06g01574 Bma-Chr6:52016946 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00821 K11593 - pvy:116141441 1774.21