Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00830 AGTGTTAGTAGCAAGGATATGATTTTCAGAGCAGATAAGATCGACTTGAAAACTTTGGATATGCAGCTAGAGAAGCATTTGAGCCGTGTTTGGAGAAACGCAGACAGTTATAGGCCGAAAGAGGAATGGGAAATTGATTTGTCAAAACTTGATATTAGATACGTTGTTGCTCATGGAACTTATGGGACTGTTTACAGGGGTACATATGATACTCAAGATGTTGCTGTGAAACTGCTGGACTGGGGGGAGGACGGGATTGCTACAGCTGCTGAAACGGCGGCTTTACGATCGTCGTTTCAGCAAGAGGTTGCCGTTTGGCATAAGCTCGATCATCCGAATGTCACAAAATTTGTTGGGGCTTCAATGGGAACATCAAATCTTAAGGTTCCTTCAAAGAACACTTCAACTGATGTCCAAAGTTCATTTCCTTCTAGAGCATGTTGTGTTGTCGTGGAGTATTTGAAACAGTTTTTGATCAGAAATAGACGGAAGAAGCTCACCTTTAAGGTCGTGATTCAACTTGCATTGGATCTGTCTAGAGGTCTTAGTTATCTTCATTCAAAGAAGATTGTACATCGTGATGTCAAAACGGAAAACATGTTGCTAGACGGCCAAAGAACCTTAAAAATTGCAGATTTTGGAGTTGCACGCGTGGAAGCTCAAAATCCGAGAGACATGACCGGGGAAACCGGTACCCTTGGATACATGGCTCCTGAGGTTCTCGATGGTAAGCCATACAATCGAAGGTGTGATGTGTATAGCTTCGGCATCTGTCTATGGGAAATTTACTGCTGTGACATGCCCTATCCTGATCTTAGCTTTGCTGATGTGTCATCTGCAGTTGTTCGACAGAATCTACGACCAGAAATCCCGAGATGTTGTCCAAGTAGTTTGGCAAATATCATGAGAAAATGCTGGGATGCAAATGCAGACAAGCGCCCTGAAATGGCCGAGGTTGTGGGAATGTTGGAAGCAATTGATACAAGTAAAGGCGGAGGAATGATTCCGGAAGATCAGGCAATTGGCTGTTTATGTTTCGCCCCTGCACGAGGACCTTAG 1059 43.91 SVSSKDMIFRADKIDLKTLDMQLEKHLSRVWRNADSYRPKEEWEIDLSKLDIRYVVAHGTYGTVYRGTYDTQDVAVKLLDWGEDGIATAAETAALRSSFQQEVAVWHKLDHPNVTKFVGASMGTSNLKVPSKNTSTDVQSSFPSRACCVVVEYLKQFLIRNRRKKLTFKVVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDGQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANADKRPEMAEVVGMLEAIDTSKGGGMIPEDQAIGCLCFAPARGP 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 45203595 45205431 + Bma015580.2 Bma02g00830 78080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00830 352 SUPERFAMILY Protein kinase-like (PK-like) 31 323 IPR011009 -
Bma02g00830 352 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 345 - -
Bma02g00830 352 SMART serkin_6 50 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00830 352 Gene3D Transferase(Phosphotransferase) domain 1 153 334 - -
Bma02g00830 352 PRINTS Tyrosine kinase catalytic domain signature 184 202 IPR001245 GO:0004672|GO:0006468
Bma02g00830 352 PRINTS Tyrosine kinase catalytic domain signature 294 316 IPR001245 GO:0004672|GO:0006468
Bma02g00830 352 PRINTS Tyrosine kinase catalytic domain signature 250 272 IPR001245 GO:0004672|GO:0006468
Bma02g00830 352 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 1 345 - -
Bma02g00830 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Bma02g00830 352 Gene3D Phosphorylase Kinase; domain 1 39 130 - -
Bma02g00830 352 PIRSF ILK 21 332 - -
Bma02g00830 352 ProSiteProfiles Protein kinase domain profile. 50 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00830 352 CDD STKc_MAP3K-like 56 323 - -
Bma02g00830 352 Pfam Protein tyrosine and serine/threonine kinase 54 322 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g00830 Bma06g01565 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00830 Bma-Chr2:45203595 Bma07g00631 Bma-Chr7:10046470 4.17E-72 dispersed
Bma02g00830 Bma-Chr2:45203595 Bma06g01565 Bma-Chr6:51936843 0 wgd
Bma02g00830 Bma-Chr2:45203595 Bma09g00626 Bma-Chr9:43610895 8.48E-156 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66358 PF07714 PK_Tyr_Ser-Thr 1.40E-54 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00830 - - jre:108989477 649.432