Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma02g00830 | AGTGTTAGTAGCAAGGATATGATTTTCAGAGCAGATAAGATCGACTTGAAAACTTTGGATATGCAGCTAGAGAAGCATTTGAGCCGTGTTTGGAGAAACGCAGACAGTTATAGGCCGAAAGAGGAATGGGAAATTGATTTGTCAAAACTTGATATTAGATACGTTGTTGCTCATGGAACTTATGGGACTGTTTACAGGGGTACATATGATACTCAAGATGTTGCTGTGAAACTGCTGGACTGGGGGGAGGACGGGATTGCTACAGCTGCTGAAACGGCGGCTTTACGATCGTCGTTTCAGCAAGAGGTTGCCGTTTGGCATAAGCTCGATCATCCGAATGTCACAAAATTTGTTGGGGCTTCAATGGGAACATCAAATCTTAAGGTTCCTTCAAAGAACACTTCAACTGATGTCCAAAGTTCATTTCCTTCTAGAGCATGTTGTGTTGTCGTGGAGTATTTGAAACAGTTTTTGATCAGAAATAGACGGAAGAAGCTCACCTTTAAGGTCGTGATTCAACTTGCATTGGATCTGTCTAGAGGTCTTAGTTATCTTCATTCAAAGAAGATTGTACATCGTGATGTCAAAACGGAAAACATGTTGCTAGACGGCCAAAGAACCTTAAAAATTGCAGATTTTGGAGTTGCACGCGTGGAAGCTCAAAATCCGAGAGACATGACCGGGGAAACCGGTACCCTTGGATACATGGCTCCTGAGGTTCTCGATGGTAAGCCATACAATCGAAGGTGTGATGTGTATAGCTTCGGCATCTGTCTATGGGAAATTTACTGCTGTGACATGCCCTATCCTGATCTTAGCTTTGCTGATGTGTCATCTGCAGTTGTTCGACAGAATCTACGACCAGAAATCCCGAGATGTTGTCCAAGTAGTTTGGCAAATATCATGAGAAAATGCTGGGATGCAAATGCAGACAAGCGCCCTGAAATGGCCGAGGTTGTGGGAATGTTGGAAGCAATTGATACAAGTAAAGGCGGAGGAATGATTCCGGAAGATCAGGCAATTGGCTGTTTATGTTTCGCCCCTGCACGAGGACCTTAG | 1059 | 43.91 | SVSSKDMIFRADKIDLKTLDMQLEKHLSRVWRNADSYRPKEEWEIDLSKLDIRYVVAHGTYGTVYRGTYDTQDVAVKLLDWGEDGIATAAETAALRSSFQQEVAVWHKLDHPNVTKFVGASMGTSNLKVPSKNTSTDVQSSFPSRACCVVVEYLKQFLIRNRRKKLTFKVVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDGQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANADKRPEMAEVVGMLEAIDTSKGGGMIPEDQAIGCLCFAPARGP | 352 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 45203595 | 45205431 | + | Bma015580.2 | Bma02g00830 | 78080 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma02g00830 | 352 | SUPERFAMILY | Protein kinase-like (PK-like) | 31 | 323 | IPR011009 | - | |
Bma02g00830 | 352 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 1 | 345 | - | - | |
Bma02g00830 | 352 | SMART | serkin_6 | 50 | 326 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma02g00830 | 352 | Gene3D | Transferase(Phosphotransferase) domain 1 | 153 | 334 | - | - | |
Bma02g00830 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 184 | 202 | IPR001245 | GO:0004672|GO:0006468 | |
Bma02g00830 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 294 | 316 | IPR001245 | GO:0004672|GO:0006468 | |
Bma02g00830 | 352 | PRINTS | Tyrosine kinase catalytic domain signature | 250 | 272 | IPR001245 | GO:0004672|GO:0006468 | |
Bma02g00830 | 352 | PANTHER | KINASE ATMRK1, PUTATIVE-RELATED | 1 | 345 | - | - | |
Bma02g00830 | 352 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 190 | 202 | IPR008271 | GO:0004672|GO:0006468 | |
Bma02g00830 | 352 | Gene3D | Phosphorylase Kinase; domain 1 | 39 | 130 | - | - | |
Bma02g00830 | 352 | PIRSF | ILK | 21 | 332 | - | - | |
Bma02g00830 | 352 | ProSiteProfiles | Protein kinase domain profile. | 50 | 326 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma02g00830 | 352 | CDD | STKc_MAP3K-like | 56 | 323 | - | - | |
Bma02g00830 | 352 | Pfam | Protein tyrosine and serine/threonine kinase | 54 | 322 | IPR001245 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma02g00830 | Bma06g01565 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00830 | Bma-Chr2:45203595 | Bma07g00631 | Bma-Chr7:10046470 | 4.17E-72 | dispersed | |
Bma02g00830 | Bma-Chr2:45203595 | Bma06g01565 | Bma-Chr6:51936843 | 0 | wgd | |
Bma02g00830 | Bma-Chr2:45203595 | Bma09g00626 | Bma-Chr9:43610895 | 8.48E-156 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66358 | PF07714 | PK_Tyr_Ser-Thr | 1.40E-54 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma02g00830 | - | - | jre:108989477 | 649.432 |