Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma02g00933 | ATGGCGCCGGCTCTGGTTTTGAATCCCGTTTCGCAATCTGGTGGCTTCCGCGATTCTTCCAGCAAGAAAAAGAAGAAGAGGAATCAGAGGAGTAAAGATAATCGCCAATCGCAGAATCACAGGCAATGGAAATCTGAATCTCAACAGCAACTCTACTCGTCCAAACTGGTTCAAGCTCTTTCTCGAATTAGGCTCACCTCCCCCACTATTTCGTCTTCCAATGAAGCGCCTCGCCGTGGCAGAGCCGTCCGGGAGGCCGCCGACAAAGCCCTAGCCATGGCGGCGAAAGGGCGAACTAGGTGGAGCCGAGCGATTTTGACGAATCGACCCAAGCTAAAGTTTCGGAAACACAAGCGAAAGAGGGCCCCTACCCCCGTAAATAGCCACTCAAAGAAACCAAGAGTTGGTGTCTGGAGATTGAAAGGAAAGTGCTTACCGGTAATCCAGAGGAAAGTTAAGGTTCTCGGCCGGCTAGTTCCCGGTTGCCAGAAGGAACCTTTGCCGGTGATTCTAGAAGAAGTTACTGATTATATCGCGGCTCTTGAGATGCAGGTTCGCACTATGACTGCTCTGGCAGGCTTGCTCTCCGGCGACACTTCCGGCGCCGGCTCAACCTCTGCACCACATCGTCGATCTGGTGCTTAG | 645 | 52.71 | MAPALVLNPVSQSGGFRDSSSKKKKKRNQRSKDNRQSQNHRQWKSESQQQLYSSKLVQALSRIRLTSPTISSSNEAPRRGRAVREAADKALAMAAKGRTRWSRAILTNRPKLKFRKHKRKRAPTPVNSHSKKPRVGVWRLKGKCLPVIQRKVKVLGRLVPGCQKEPLPVILEEVTDYIAALEMQVRTMTALAGLLSGDTSGAGSTSAPHRRSGA | 214 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 49184765 | 49185409 | + | Bma015723.1 | Bma02g00933 | 78183 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma02g00933 | 214 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 7 | 208 | - | - | |
| Bma02g00933 | 214 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 7 | 208 | IPR044660 | GO:0006355 | |
| Bma02g00933 | 214 | CDD | bHLH_AtIBH1_like | 139 | 192 | IPR044549 | GO:0006355 | |
| Bma02g00933 | 214 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
| Bma02g00933 | 214 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 149 | 197 | IPR036638 | GO:0046983 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma02g00933 | Bma-Chr2:49184765 | Bma05g00259 | Bma-Chr5:7230473 | 7.12E-45 | dispersed | |
| Bma04g01120 | Bma-Chr4:26808642 | Bma02g00933 | Bma-Chr2:49184765 | 1.96E-71 | transposed | |
| Bma05g00998 | Bma-Chr5:48461233 | Bma02g00933 | Bma-Chr2:49184765 | 1.23E-73 | transposed | |
| Bma02g00933 | Bma-Chr2:49184765 | Bma06g01459 | Bma-Chr6:51276438 | 3.72E-79 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma02g00933 | - | - | zju:107418975 | 236.884 |