Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00935 ATGGAGAAGAAAGAAGGGGCTAAACCCGAGAATTCCACCATGGCAAATTCTTCCGTCATATTCTCCGACGAGATTCCGGCCACTTTTGCTTTATCCGGCATCTTCGACATACCATGTGAGACCGAAAATCGTTCCTTGGGCTTCGTCGATTTGTTGGGTATCCAAGATTACAGTCCATCCTTATTCGATGTCTTTTCGATGCCGCTGTTGGCACCGGAAGCTCTGCCTTCTCCGGCATCCACCGTCCCAGAGTCATCGGAAGTGTTGAATACTCCGACGACGCCTAACTCTTCTTCAATTTCTTCTTCCTCTAACGAAGCAGCTAACAATGAACAGACCAAAGCTGGTGAAGAGGACGAGCAAGATCAAGATAAGACTAAGAAACATTTGAAAACAAAAAAGAAGAACCAAAAAAGGCAAAGAGAGCCAAGATTTGCGTTTATGACGAAGAGCGAGGTCGATCATTTAGACGACGGCTACAGATGGCGCAAATACGGCCAAAAAGCTGTAAAAAACAGTCCATATCCAAGGAGCTATTATCGATGCACCACAGCCGGGTGTGGAGTGAAGAAGCGGGTAGAGCGATCATGCGACGACCCATCGATCGTCGTCACAACCTACGAAGGCCAACACACTCATCAGACACCAGTAACGGCGAGGGGAAGCATCGGAATCTCGCCGGAAATGGGAGGATTCAGCTCGCCATTTGCTGCTCAAATCAGCCAGCAAAACCCTCAACCCTACATGTACAACCCATTACCTTCTTTGAACATTAGCTCTACTTGTTTTAACCCTTCGTTTCCCACCTTTTCTCAAAACAAACTTGCTGGTTCGCCCTCTCCTTCTTTACTTAGAGACCACGGGCTTCTTCAGGATATCGTACCATTTCAGATGCGGAAGGACCCAAAAGAGGAATAA 918 47.28 MEKKEGAKPENSTMANSSVIFSDEIPATFALSGIFDIPCETENRSLGFVDLLGIQDYSPSLFDVFSMPLLAPEALPSPASTVPESSEVLNTPTTPNSSSISSSSNEAANNEQTKAGEEDEQDQDKTKKHLKTKKKNQKRQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSCDDPSIVVTTYEGQHTHQTPVTARGSIGISPEMGGFSSPFAAQISQQNPQPYMYNPLPSLNISSTCFNPSFPTFSQNKLAGSPSPSLLRDHGLLQDIVPFQMRKDPKEE 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 49202332 49203489 + Bma015725.1 Bma02g00935 78185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00935 305 MobiDBLite consensus disorder prediction 76 145 - -
Bma02g00935 305 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 45 295 - -
Bma02g00935 305 SMART WRKY_cls 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma02g00935 305 MobiDBLite consensus disorder prediction 112 127 - -
Bma02g00935 305 MobiDBLite consensus disorder prediction 79 111 - -
Bma02g00935 305 Pfam WRKY DNA -binding domain 157 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma02g00935 305 ProSiteProfiles WRKY domain profile. 151 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma02g00935 305 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 45 295 IPR044810 GO:0003700
Bma02g00935 305 Gene3D WRKY domain 140 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma02g00935 305 SUPERFAMILY WRKY DNA-binding domain 148 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g00935 Bma06g01458 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00117 Bma-Chr1:1178049 Bma02g00935 Bma-Chr2:49202332 2.32E-40 dispersed
Bma02g00935 Bma-Chr2:49202332 Bma06g00731 Bma-Chr6:38296601 2.02E-46 dispersed
Bma03g01343 Bma-Chr3:28207900 Bma02g00935 Bma-Chr2:49202332 5.89E-50 transposed
Bma05g00833 Bma-Chr5:45706280 Bma02g00935 Bma-Chr2:49202332 1.83E-27 transposed
Bma06g01340 Bma-Chr6:50333972 Bma02g00935 Bma-Chr2:49202332 2.30E-34 transposed
Bma10g00947 Bma-Chr10:20283799 Bma02g00935 Bma-Chr2:49202332 9.60E-69 transposed
Bma10g01123 Bma-Chr10:36032713 Bma02g00935 Bma-Chr2:49202332 2.48E-54 transposed
Bma11g00956 Bma-Chr11:42675043 Bma02g00935 Bma-Chr2:49202332 4.78E-44 transposed
Bma02g00935 Bma-Chr2:49202332 Bma06g01458 Bma-Chr6:51257200 6.49E-90 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56901 PF03106 WRKY 3.00E-26 CL0274 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00935 - - jre:109010772 361.688