Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma02g00936 | TTATGCAGTAAGATGGTTACGTCCATCACTTTTTATTTTGTCATGTTTATGGCCGTTGCAGCCTTTTCTAGCTTCCACGGCGATTTGGATGGCGCATTTGAGATCGGCTCTGGCTTACAGCAGTACCCCTGTCCAGAGGCTGAAGCCATAGTTTTCGCCGGTGTCCATCTCGCGGTTTCCCATGACCCGAGAATGGCTGCTTCGTTGATTCGCCTCCATTTTCACGACTGCTTCTTTTCGACGTTGTTATTGCAGGGTTGTGACGCTTCTGTTTTGCTTGATGACAGCAAAGACTTCGTCGGAGAGAAAAGCGCAGCTCCGAACGTGAATTCTTTGCGGGGATTCGAAGTGATAGATGCTATAAAACGTGAAGTTGAATATGTTTGTCCGGAGACCGTCTCATGCGCCGACATTTTGGCCATAGCTGCAAGAGACTCTGTCGTTCTGTCAGGAGGACCCAGTTGGGAAGTTGAAATGGGGAGGAAGGACAGCTTGAGAGCTGATAAAGAAGCAGCAAACAAAAACATTCCATCCCCAAATTCGACTGTTTCAAACATTGTCGTTAAGTTCCAGAATTTAGGTCTTACTCTCAGAGACATGGTTGCTCTCTCTGGAGCTCACACAATCGGAAAAGCGCGATGTTCTTCGTTTGAATCTCGACTAAAGGAATCGAGCTCGAGGATCTCCAATGGAGGATTGGAGGCATTCCGGGAGACTCTGAAAATGTTATGCCTGGAATCGGATGGCGACGAAGCGACGGGAAACCTTGACCTGACGACGCCGGCGGCATTTGACAACCAGTACTACGTCAATCTTCTGTACGGCGAAGGATTACTGGAATCAGACCAGGCCATGTTTAGCCAGAACAATGAGACGCGTGAGATCGTGGAATCCTACGCCCAGGATTCAGTTGCCTTCTTCGACGACTTTAAGATTGCCATGTTGAAAATGGGGAGCTTGGGAATGCTGAGTGGCGAAGAAGTAGAGATTCGCAGGAACTGTCGTACTGTTAATTAA | 1017 | 48.18 | LCSKMVTSITFYFVMFMAVAAFSSFHGDLDGAFEIGSGLQQYPCPEAEAIVFAGVHLAVSHDPRMAASLIRLHFHDCFFSTLLLQGCDASVLLDDSKDFVGEKSAAPNVNSLRGFEVIDAIKREVEYVCPETVSCADILAIAARDSVVLSGGPSWEVEMGRKDSLRADKEAANKNIPSPNSTVSNIVVKFQNLGLTLRDMVALSGAHTIGKARCSSFESRLKESSSRISNGGLEAFRETLKMLCLESDGDEATGNLDLTTPAAFDNQYYVNLLYGEGLLESDQAMFSQNNETREIVESYAQDSVAFFDDFKIAMLKMGSLGMLSGEEVEIRRNCRTVN | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 49244388 | 49245648 | + | Bma015728.1 | Bma02g00936 | 78186 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma02g00936 | 338 | PANTHER | PEROXIDASE 40 | 24 | 337 | - | - | |
Bma02g00936 | 338 | PANTHER | PEROXIDASE 72-RELATED | 24 | 337 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | ProSitePatterns | Peroxidases active site signature. | 66 | 77 | IPR019794 | GO:0004601 | |
Bma02g00936 | 338 | SUPERFAMILY | Heme-dependent peroxidases | 39 | 338 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | ProSiteProfiles | Plant heme peroxidase family profile. | 34 | 338 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 199 | 209 | IPR019793 | - | |
Bma02g00936 | 338 | PRINTS | Plant peroxidase signature | 68 | 88 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Plant peroxidase signature | 132 | 142 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Plant peroxidase signature | 255 | 270 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Plant peroxidase signature | 151 | 166 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Plant peroxidase signature | 44 | 63 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Plant peroxidase signature | 271 | 288 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Plant peroxidase signature | 198 | 210 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Plant peroxidase signature | 113 | 126 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Plant peroxidase signature | 312 | 325 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | CDD | secretory_peroxidase | 44 | 337 | IPR033905 | GO:0004601|GO:0042744 | |
Bma02g00936 | 338 | Pfam | Peroxidase | 56 | 302 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | Gene3D | Peroxidase, domain 2 | 177 | 318 | - | - | |
Bma02g00936 | 338 | PRINTS | Haem peroxidase superfamily signature | 257 | 272 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Haem peroxidase superfamily signature | 199 | 214 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Haem peroxidase superfamily signature | 151 | 163 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Haem peroxidase superfamily signature | 66 | 80 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | PRINTS | Haem peroxidase superfamily signature | 133 | 150 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
Bma02g00936 | 338 | Gene3D | - | 43 | 338 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00936 | Bma-Chr2:49244388 | Bma09g00092 | Bma-Chr9:2440209 | 3.28E-101 | dispersed | |
Bma02g00936 | Bma-Chr2:49244388 | Bma08g01042 | Bma-Chr8:49536459 | 3.34E-95 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma02g00936 | K00430 | - | jre:109010773 | 403.675 |