Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00936 TTATGCAGTAAGATGGTTACGTCCATCACTTTTTATTTTGTCATGTTTATGGCCGTTGCAGCCTTTTCTAGCTTCCACGGCGATTTGGATGGCGCATTTGAGATCGGCTCTGGCTTACAGCAGTACCCCTGTCCAGAGGCTGAAGCCATAGTTTTCGCCGGTGTCCATCTCGCGGTTTCCCATGACCCGAGAATGGCTGCTTCGTTGATTCGCCTCCATTTTCACGACTGCTTCTTTTCGACGTTGTTATTGCAGGGTTGTGACGCTTCTGTTTTGCTTGATGACAGCAAAGACTTCGTCGGAGAGAAAAGCGCAGCTCCGAACGTGAATTCTTTGCGGGGATTCGAAGTGATAGATGCTATAAAACGTGAAGTTGAATATGTTTGTCCGGAGACCGTCTCATGCGCCGACATTTTGGCCATAGCTGCAAGAGACTCTGTCGTTCTGTCAGGAGGACCCAGTTGGGAAGTTGAAATGGGGAGGAAGGACAGCTTGAGAGCTGATAAAGAAGCAGCAAACAAAAACATTCCATCCCCAAATTCGACTGTTTCAAACATTGTCGTTAAGTTCCAGAATTTAGGTCTTACTCTCAGAGACATGGTTGCTCTCTCTGGAGCTCACACAATCGGAAAAGCGCGATGTTCTTCGTTTGAATCTCGACTAAAGGAATCGAGCTCGAGGATCTCCAATGGAGGATTGGAGGCATTCCGGGAGACTCTGAAAATGTTATGCCTGGAATCGGATGGCGACGAAGCGACGGGAAACCTTGACCTGACGACGCCGGCGGCATTTGACAACCAGTACTACGTCAATCTTCTGTACGGCGAAGGATTACTGGAATCAGACCAGGCCATGTTTAGCCAGAACAATGAGACGCGTGAGATCGTGGAATCCTACGCCCAGGATTCAGTTGCCTTCTTCGACGACTTTAAGATTGCCATGTTGAAAATGGGGAGCTTGGGAATGCTGAGTGGCGAAGAAGTAGAGATTCGCAGGAACTGTCGTACTGTTAATTAA 1017 48.18 LCSKMVTSITFYFVMFMAVAAFSSFHGDLDGAFEIGSGLQQYPCPEAEAIVFAGVHLAVSHDPRMAASLIRLHFHDCFFSTLLLQGCDASVLLDDSKDFVGEKSAAPNVNSLRGFEVIDAIKREVEYVCPETVSCADILAIAARDSVVLSGGPSWEVEMGRKDSLRADKEAANKNIPSPNSTVSNIVVKFQNLGLTLRDMVALSGAHTIGKARCSSFESRLKESSSRISNGGLEAFRETLKMLCLESDGDEATGNLDLTTPAAFDNQYYVNLLYGEGLLESDQAMFSQNNETREIVESYAQDSVAFFDDFKIAMLKMGSLGMLSGEEVEIRRNCRTVN 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 49244388 49245648 + Bma015728.1 Bma02g00936 78186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00936 338 PANTHER PEROXIDASE 40 24 337 - -
Bma02g00936 338 PANTHER PEROXIDASE 72-RELATED 24 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Bma02g00936 338 SUPERFAMILY Heme-dependent peroxidases 39 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 ProSiteProfiles Plant heme peroxidase family profile. 34 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 199 209 IPR019793 -
Bma02g00936 338 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Plant peroxidase signature 132 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Plant peroxidase signature 255 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Plant peroxidase signature 271 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Plant peroxidase signature 198 210 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Plant peroxidase signature 113 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Plant peroxidase signature 312 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 CDD secretory_peroxidase 44 337 IPR033905 GO:0004601|GO:0042744
Bma02g00936 338 Pfam Peroxidase 56 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 Gene3D Peroxidase, domain 2 177 318 - -
Bma02g00936 338 PRINTS Haem peroxidase superfamily signature 257 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Haem peroxidase superfamily signature 199 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Haem peroxidase superfamily signature 151 163 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 PRINTS Haem peroxidase superfamily signature 133 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g00936 338 Gene3D - 43 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00936 Bma-Chr2:49244388 Bma09g00092 Bma-Chr9:2440209 3.28E-101 dispersed
Bma02g00936 Bma-Chr2:49244388 Bma08g01042 Bma-Chr8:49536459 3.34E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00936 K00430 - jre:109010773 403.675