Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma02g00942 | ATGGCTAACGAATGCTGTGTGAGCAGCTCATGTGGAACTACAGCCCTGACAGCCTTTCTTCTCGGAAGACATTTGTTGGTTGCAAATGCCGGAGACTGTCGGGCTGTTCTCTGCAGAAAAGGGATTGCAGTGGAGATGTCAAAGGACCATAGACCGACTAATGCAGTCGAATGCAAGAGAGTTGAACAGCTAGGCGGCTACATTGATGATGGATATCTTAATGGCTATCTGTCAGTAACCCGAGCGTTGGGCGACTGGGACTTCAAATTCCCCCTCGGCTCCTCCTCACCTCTCATTGCCGAACCGGAGTTTGAACATGTTAAGCTGACAGAAGAGGACGAATTCCTGATCATTGGTTGCGATGGTGTATGGGACGTAATGTCAAGTCAGTATGCAGTTAGTCTAGTCCGACGGGGATTAAGAAGGCATAACGACCCTCAGCAAAGCGCTAAAGAAGTAGTTGCTGAAGCTCTACGGCTCAGCACATCTGATAATCTTACAGTGATTGTGATTAGTTTTTGTCCTCCCAGCCGAATAATCGAGTCAAGCCCCGGTCGACCACAGAGGCTCAGGTTCTGTAATACATCCCAAAGAGCCCACAAGTAA | 606 | 48.68 | MANECCVSSSCGTTALTAFLLGRHLLVANAGDCRAVLCRKGIAVEMSKDHRPTNAVECKRVEQLGGYIDDGYLNGYLSVTRALGDWDFKFPLGSSSPLIAEPEFEHVKLTEEDEFLIIGCDGVWDVMSSQYAVSLVRRGLRRHNDPQQSAKEVVAEALRLSTSDNLTVIVISFCPPSRIIESSPGRPQRLRFCNTSQRAHK | 201 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 49321058 | 49321663 | - | Bma015736.1 | Bma02g00942 | 78192 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma02g00942 | 201 | SUPERFAMILY | PP2C-like | 9 | 173 | IPR036457 | - | |
| Bma02g00942 | 201 | SMART | PP2C_4 | 2 | 171 | IPR001932 | - | |
| Bma02g00942 | 201 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 173 | IPR001932 | - | |
| Bma02g00942 | 201 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 187 | IPR015655 | GO:0004722|GO:0006470 | |
| Bma02g00942 | 201 | PANTHER | PROTEIN PHOSPHATASE 2C 49-RELATED | 1 | 187 | - | - | |
| Bma02g00942 | 201 | CDD | PP2Cc | 1 | 173 | IPR001932 | - | |
| Bma02g00942 | 201 | Gene3D | - | 2 | 175 | IPR036457 | - | |
| Bma02g00942 | 201 | Pfam | Protein phosphatase 2C | 8 | 165 | IPR001932 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bma02g00942 | Bma04g01161 | CCT | |
| Bma02g00942 | Bma04g01161 | ECH |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma02g00942 | Bma-Chr2:49321058 | Bma13g00101 | Bma-Chr13:1054087 | 1.89E-83 | dispersed | |
| Bma02g00942 | Bma-Chr2:49321058 | Bma04g00294 | Bma-Chr4:2356598 | 4.33E-72 | transposed | |
| Bma02g00942 | Bma-Chr2:49321058 | Bma01g02414 | Bma-Chr1:81713453 | 6.84E-72 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma02g00942 | K14803 | - | mnt:21408816 | 299.286 |