Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00992 ATGGGGTTCATTTCAACAGAGTTCCTCATATGGGTCTTTAAGATGAACACTAGAAAAGCTACATTTCTGCTAGAATTTATGGTCTTGGCAAATTTGTTCTTGTGGGTATCTGGTTTAGGCTCCATGTCTTCTGTTGCCGTCTCTTATGGCGAAAAGGGTCCTGTTTTCTGTGGCTTAAAACCAGATGGTTCCCATCTTGTAACTTGTTATGGATCAAACACAGCTATAACCTTTGGAATTCCTTCTCATATCTCCTTCTCTGGTCTTGCTGCCGGTGACGGTTTCGTCTGTGGACTCGTTATGGATTCAAATCAGCCATATTGTTGGGGAAGTAGTGGATACATTCAAATGGGTGTTCCTCAACCAATGAGCAAAGAAGCTGAGTATTTGGAAATTAGTGCAGGGGATTACCATTTGTGTGGCCTTAGAAAGCCTTTGGCGGGTCAAAAAAGAAGCACTTCCTCGGTCGATTGTTGGGGCTATAACATGACGAAGACGTTTGTTTTCGATGGAGAAATCAACTCGATCTCAGCTGGCTCGGAGTTTAACTGCGGATTGTTCGCCGAAAATAGAACTGTTTTTTGCTGGGGGGACGAGACTAGCAGCTGGGTGATCAGCTTGATTCCGAAAGATATGAGGTTTCAAAAGATTGCTTCGGGAGGGTATCATGTTTGTGGGATTTTAGAGGGGGAAAGTTCTAGACCCTTTTGTTGGGGAAGGAGTTTAGACATCGAAGAAGAAATCTCGGGAACATATTCGAGCCAAGGGAGTGTCGATTTGGCTCCAAATTATTCGATTCTCTCTGTTGTAGGTGGAAAATTTCATGCCTGCGGAATAAAAAGCGTCGATCGAAGCGTAATTTGCTGGGGTTTTATAGTCAAACCGAGCACTCCGGCCCCTAGTGGAGTCGAAGTTTATGAGATTGCAGCCGGTGATTATTTCACATGTGGAATTTTAGCAGATAAATCGCTCTTGCCTGTTTGTTGGGGTCTTGGATTTCCTTCTTCTCTCCCTTTAGCTGTCTCCCCCGGCCTTTGCAAGTCCACTCCCTGTGCTCCAGGCTTCTATGAGCTGAACCAGACCACTGCTCCTTGTAAGTCTGTAAACTCTCGAGTATGCTTGCCTTGCAGCAATGGCTGCCCACCCGAGATGTACCCGGTTTTCGACTGCACTTTAAAATCGGATAGAAAATGTGTGTATAACTGTTCTAATTGTCACAATGCTGAGTGCTTGTCAAATTGTTCTAACTCATTTTCGAGTGGGATTGCGGGGAAGAAGAACGAGAAGTTTTGGTCAATGCAATTGCCTGTGATCATTGCCGAGATTTCTTTTGGCATTTTTTTGGTGACAGTCGTTTCACTGACTGCAATTCTATACGTTCGATACAAGTTGAGAAACTGTCACTGCTCTGGAAAAGAGACAAAGTCGAAGAAAACCAAAGGCGGCAGCACTGCCTTCCAAAAGGATAATGGTAAAATTCGTCCCGATTTGGACGAACTTAAGATACAGAGAGCTCGAACGTTTACTTACGACGAACTTGAGAGGGCCACCGGAGGGTTTAAAGAAGAGTCTCTCGTCGGGAAAGGGAGCTTCTCGTGTGTTTTCCGAGGGGTATTGAAGGACGGGACGGTTGTGGCTGTCAAAAGGGCGATAATGTCTCCGAACGTACAGAAGAATTCAAAAGAGTTCCACACTGAACTAGACTTACTCTCAAGGCTAAATCATGCCCATCTACTTAATCTACTCGGATATTGCGAAGAAGGCGGAGAGAGGCTTCTAGTTTATGAGTTCATGGCTCACGGATCGCTTCACCAGCACCTCCACGGGAAGAACAAGGCGTTAAAAGAGCAGTTAGATTGGGTTCGACGGGTCACCATTGCAGTCCAAGCAGCTCGAGGAATTGAGTATTTGCATGGATATGCCTGCCCACCAGTCATTCATCGAGATATTAAGTCCTCAAACATCCTCATTGACGAAGAACACAATGCTCGAGTTGCCGATTTCGGCTTGTCCTTGTTGGGACCCGCCGATAGTGGCTCCCCATTGGCCGAGCTACCGGCAGGGACCCTCGGATATCTCGATCCCGAATACTACAGACTCCACTACCTCACTACGAAATCCGATGTCTACAGCTTTGGAGTTTTGCTATTGGAGATTGTTAGTGGGAGAAAAGCAATTGACATGCAATACGAAGAAGGAAACATAGTCGAGTGGGCAGTGCCGTTGATCAAATCCGGAGACATATCGACAATTCTTGACCCAGTTTTGAAGCTACCTGCCGATATGGAAGCCATGAAAAGGATCACGAATGTGGCCTGTAAGTGCGTGAGAATGAGAGGGAAGGAGAGGCCGTCGATGGATAAAGTCACGACAGCTTTGGAACGATCTCTCGCTCAGTTGATGGGGAGCCCGTCAAATCAGTCAAATCGATCGGAGACCGACGTGGCAGAGGGAGAGGATCAAAGATTCGAATTTCGAGCTCCATCGTGGATTACATTTCCGAGTGTTACTTCTTCTCAGAGGAGAAAATCCTCTGTTTCAGAGGCAGATGTTGATGGCAAGACTTTAGAGCAAAGAAACAATGGAAATGTGAGTGGTTTTGTTGATGGATTGAGAAGTTTGGAGGAAGAGATTGGGCCTGCTTCTCCACAGGAAAAGCTGTTCTTAGAACACAATTTCTGA 2682 45.9 MGFISTEFLIWVFKMNTRKATFLLEFMVLANLFLWVSGLGSMSSVAVSYGEKGPVFCGLKPDGSHLVTCYGSNTAITFGIPSHISFSGLAAGDGFVCGLVMDSNQPYCWGSSGYIQMGVPQPMSKEAEYLEISAGDYHLCGLRKPLAGQKRSTSSVDCWGYNMTKTFVFDGEINSISAGSEFNCGLFAENRTVFCWGDETSSWVISLIPKDMRFQKIASGGYHVCGILEGESSRPFCWGRSLDIEEEISGTYSSQGSVDLAPNYSILSVVGGKFHACGIKSVDRSVICWGFIVKPSTPAPSGVEVYEIAAGDYFTCGILADKSLLPVCWGLGFPSSLPLAVSPGLCKSTPCAPGFYELNQTTAPCKSVNSRVCLPCSNGCPPEMYPVFDCTLKSDRKCVYNCSNCHNAECLSNCSNSFSSGIAGKKNEKFWSMQLPVIIAEISFGIFLVTVVSLTAILYVRYKLRNCHCSGKETKSKKTKGGSTAFQKDNGKIRPDLDELKIQRARTFTYDELERATGGFKEESLVGKGSFSCVFRGVLKDGTVVAVKRAIMSPNVQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKNKALKEQLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEIVSGRKAIDMQYEEGNIVEWAVPLIKSGDISTILDPVLKLPADMEAMKRITNVACKCVRMRGKERPSMDKVTTALERSLAQLMGSPSNQSNRSETDVAEGEDQRFEFRAPSWITFPSVTSSQRRKSSVSEADVDGKTLEQRNNGNVSGFVDGLRSLEEEIGPASPQEKLFLEHNF 893
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 50439777 50442528 - Bma030918 Bma02g00992 78242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00992 893 SUPERFAMILY Protein kinase-like (PK-like) 500 793 IPR011009 -
Bma02g00992 893 Gene3D Phosphorylase Kinase; domain 1 493 597 - -
Bma02g00992 893 Gene3D - 202 344 IPR009091 -
Bma02g00992 893 ProSiteProfiles Protein kinase domain profile. 520 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00992 893 MobiDBLite consensus disorder prediction 800 819 - -
Bma02g00992 893 Gene3D - 36 201 IPR009091 -
Bma02g00992 893 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 350 398 IPR001368 GO:0005515
Bma02g00992 893 Pfam Protein tyrosine and serine/threonine kinase 523 792 IPR001245 GO:0004672|GO:0006468
Bma02g00992 893 MobiDBLite consensus disorder prediction 837 864 - -
Bma02g00992 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Bma02g00992 893 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Bma02g00992 893 SMART serkin_6 520 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00992 893 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 21 893 - -
Bma02g00992 893 PANTHER RECEPTOR-LIKE KINASE 21 893 - -
Bma02g00992 893 Gene3D Transferase(Phosphotransferase) domain 1 598 819 - -
Bma02g00992 893 SUPERFAMILY RCC1/BLIP-II 40 291 IPR009091 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00992 Bma-Chr2:50439777 Bma04g00609 Bma-Chr4:5832638 2.33E-117 dispersed
Bma02g00992 Bma-Chr2:50439777 Bma08g01023 Bma-Chr8:49338283 5.94E-106 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66366 PF07714 PK_Tyr_Ser-Thr 5.00E-44 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00992 - - pvy:116117325 1476.46