Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01002 ATGAAGAAAGATGCACGGAAAATTATGTTTTTGCTTACTGGTTTTTCATTTTTAGCTCTGATGCTGAGTGCAGAAAGTTTGACAATAAAGCCTGAATGTCAAGATAGATGTGGAAGAGTTCAGATTCCGTACCCGTTTGGAATCGGCCCTGGTTGCTACTTGAGAAAAGGATTTGCCGTTTCTTGCAACAAATCAGGAAATGATCCTGCACCGAAGCCTTTCTTGACCAGCGTGAATATGGAAATTCTTGAAATATCCGCCGATCAAAGTAGTTTCCGAGTCAACTATCCTGTGGTTTTCTCCAATTGCGGGAAGAAGAACAACAGTGAAACAGTCATGGACCTCACTTCCACCCCCTTTTCAATATCGGACCAAGAGAATCAGTTCACCGCCATGGGATGCGACAATCTGGCTCTTCTCAAAGACCAAAACACAATCTATGGCGGTTGCCTCTCCATTTGTCTGGAGGTCGTGGGACTCGATGCTTCTACGAAGAACGAAACGAATCTCAGAAGCTGCAACGGCATAAACTGCTGCCAAACTTCGATTCCACCGTTCCTGAATAGAATCGGTGTGTCGATGCAGAGCACAAATGCGACAAGAGAAAAGCTCGATTCGAAATGCAGGTATTCTTTCATGGCGGAAAAGGCATGGTTCAACCCAAACAACGTCGATCTGTTCGTCAACAACACTGATTTCGTTCCTGCGATCCTTCTTTGGGGAGTGGGAGACGATAATTGCACAGGTGGAGAGAACGACACTCTGATTTGCGGAAGAAACGCTGGATGTTCGTCGGTGGTAGGAGTTTATGGAGGCGTCTGTAAATGTAAAGGTGGATACGAGGGGAATCCTTACTTACCTCGCGGGTGCCAAGATATAAATTACTGCAGCCCAGAGAAGAACCCTTGCTTCCAATCGATCTGCCAATCAAATCTATCTGGCCCAACTTGCATTTCTTGTCCCGACCGCAACACCTTCTCCGACAACAACTGCTATCCTCCCGGCCAACAACACGCAGTAATCATCATAGGTTGCAGTGTTGGATTTGGGGGGATATTTCTTGTGATATTTTCATGGTGGTTGTTCAGACTACTGCAAAGAAGAAGGGTGAAGAAACAAAAAGAGACGTTCTTCAAAAGAAATGGAGGTTTATTGCTTCAACAACTCTCTGCAACCGAGACCGGCATCAAAAAATCGAGAATGTTTTCCGCAGAAGAGCTGATGAAGGCCACAGATCAATACAACGAGAATCGAATTCTAGGGAAAGGAGGCCAAGGCACCGTCTTCAAAGGGATGATGACGGACGGACAGATTGTCGCCGTTAAAAAGTCGAAGATCGAAAACAACAGCCTCCTTGAGCAGTTCATCAACGAGGTTGTCATCTTGTCTCAAATCAACCATAGGAATGTCGTCAAGCTCCTAGGGTTTTGTTTGGAAAGCGAAGTTCCTCTTCTTGTCTACGAGTTCATTCAAAATGGAACTCTATTCCAGCATTTGCACGAGCCCAACGAGGACTTCCCATTTACATGGAACATGCGACTGAGAATCGCGGTCGAGATCGCATCCGCTCTTTCCTACCTCCACTCGGCCGCCTCAATCCCGATATATCACCGAGATATCAAGTCGACCAACATTCTCCTAGACGAAAAATACGTTGCGAAAGTTTCCGATTTCGGAGCGTCGAAATCTTTCGCGGTTGATCAAACCCACATGACGACTAAAGTACAAGGAACTTTCGGGTATCTAGACCCCGAATACTTCCAATCAAATCAGTTCACAGAAAAGAGCGACGTATACAGCTTCGGCGTTGTTTTGACCGAGCTTCTAACGGGGCAGAAGCCGATATCGTCGACGAGATCGGTAGAAGAAAAGAACTTAACTGCAATGTTCCTAAGACTCATGAAGGAGGATCGTCTTAAGGAGATTCTCGATCCGAGAATATCGAAAGACGGGAAGGAAGAAGAGATATTGTCGGTCGGGAAGCTTGCGAAAAGGTGTCTGAATTTGAACGGGAAGAAGAGACCGACCATGAAAGAAGTTGCAGTCGAGTTGGAAATGATTAGATCTCAAATTACAGTGGTTGAAAGAGAAGAAAATGGTGATCGGATTGAGGATGAAGACGAATATGGTGTGGTTGAAATAGCCATGAATGCAGGAAGCAAGGAAACTGGGGCAACCTCCATTTCAGCACATTCTGATTCACACCCATTACTGTTCAGTGACTAA 2226 45.51 MKKDARKIMFLLTGFSFLALMLSAESLTIKPECQDRCGRVQIPYPFGIGPGCYLRKGFAVSCNKSGNDPAPKPFLTSVNMEILEISADQSSFRVNYPVVFSNCGKKNNSETVMDLTSTPFSISDQENQFTAMGCDNLALLKDQNTIYGGCLSICLEVVGLDASTKNETNLRSCNGINCCQTSIPPFLNRIGVSMQSTNATREKLDSKCRYSFMAEKAWFNPNNVDLFVNNTDFVPAILLWGVGDDNCTGGENDTLICGRNAGCSSVVGVYGGVCKCKGGYEGNPYLPRGCQDINYCSPEKNPCFQSICQSNLSGPTCISCPDRNTFSDNNCYPPGQQHAVIIIGCSVGFGGIFLVIFSWWLFRLLQRRRVKKQKETFFKRNGGLLLQQLSATETGIKKSRMFSAEELMKATDQYNENRILGKGGQGTVFKGMMTDGQIVAVKKSKIENNSLLEQFINEVVILSQINHRNVVKLLGFCLESEVPLLVYEFIQNGTLFQHLHEPNEDFPFTWNMRLRIAVEIASALSYLHSAASIPIYHRDIKSTNILLDEKYVAKVSDFGASKSFAVDQTHMTTKVQGTFGYLDPEYFQSNQFTEKSDVYSFGVVLTELLTGQKPISSTRSVEEKNLTAMFLRLMKEDRLKEILDPRISKDGKEEEILSVGKLAKRCLNLNGKKRPTMKEVAVELEMIRSQITVVEREENGDRIEDEDEYGVVEIAMNAGSKETGATSISAHSDSHPLLFSD 741
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 50829937 50833557 - Bma015815.2 Bma02g01002 78252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01002 741 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 23 702 IPR045274 GO:0007166
Bma02g01002 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Bma02g01002 741 SUPERFAMILY Protein kinase-like (PK-like) 398 682 IPR011009 -
Bma02g01002 741 Pfam Protein kinase domain 414 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01002 741 PANTHER PUTATIVE-RELATED 23 702 - -
Bma02g01002 741 Pfam Wall-associated receptor kinase galacturonan-binding 33 95 IPR025287 GO:0030247
Bma02g01002 741 SUPERFAMILY Growth factor receptor domain 256 333 IPR009030 -
Bma02g01002 741 MobiDBLite consensus disorder prediction 720 741 - -
Bma02g01002 741 CDD STKc_IRAK 420 685 - -
Bma02g01002 741 SMART serkin_6 414 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01002 741 Gene3D Phosphorylase Kinase; domain 1 386 489 - -
Bma02g01002 741 ProSiteProfiles Protein kinase domain profile. 414 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01002 741 Gene3D Transferase(Phosphotransferase) domain 1 490 710 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01002 Bma-Chr2:50829937 Bma14g00234 Bma-Chr14:2834272 0 dispersed
Bma02g01002 Bma-Chr2:50829937 Bma02g01003 Bma-Chr2:51096531 0 tandem
Bma01g01974 Bma-Chr1:73570263 Bma02g01002 Bma-Chr2:50829937 4.20E-87 transposed
Bma01g02428 Bma-Chr1:81951047 Bma02g01002 Bma-Chr2:50829937 5.64E-146 transposed
Bma07g01100 Bma-Chr7:44030119 Bma02g01002 Bma-Chr2:50829937 0 transposed
Bma02g01002 Bma-Chr2:50829937 Bma04g01006 Bma-Chr4:16670670 7.60E-11 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66367 PF00069 Pkinase 8.10E-53 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01002 - - hbr:110647681 747.658