Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01003 ATGAAGAAACAAAAAGAGATGTTCTTCAAAAGAAATGGAGGTTTATTGCTTCAACAACTCTCTGCAACCGAGACCGGCATCAAAAAATCGAGAATGTTTTCCGCAGAAGAGCTGATGAAGGCCACAGATCAATACAACGAGAATCGAATTCTAGGGAAAGGAGGCCAAGGCACCGTCTTCAAAGGGATGATGACGGACGGACAGATCGTCGCCGTTAAAAAGTCGAAGATCGAAAACAACAGCCTCCTCGAGCAGTTCATCAACGAAGTTGTCATCTTGTCTCAAATCAACCATAGGAATGTCGTCAAGCTCCTAGGGTTTTGTTTGGAAAGCGAAGTTCCTCTTCTTGTCTACGAGTACATTCAAAATGGAACTCTATTCCAGCATTTGCACGAGCCCAACGAGGACTTCCCATTTACATGGAACATGCGACTGAGAATCGCGGTCGAGATCGCATCCGCTCTTTCCTACCTCCACTCGGCCGCCTCAATCCCGATATATCACCGAGATATCAAGTCGACGAACATTCTCCTAGACGAAAAATACGTCGCGAAAGTTTCCGATTTCGGAGCGTCGAAATCTTTCGCGGTTGATCAAACACACATGACGACTAAAGTACAAGGAACTTTCGGGTATCTAGCCCCCGAATACTTCCAATCAAATCAGTTCACAGAAAAGAGCGACGTATACAGCTTTGGCGTTGTTTTGACCGAGCTTCTAACGGGGCAGAAGCCGATATCGTCGACGAGATCGGAAGAAGAAAAGAACTTAACTGCAATGTTCCTAAGACTCATGAAGGAGAATCGTCTTAAGGAGATTCTCGATCCGAGAATATCGAAAGACGGGACGGAAGAAGCGATGTTGTCGGTCGGGAAGCTTGCGAAAAGGTGTCTGAATTTGAACGGAAAGAAGAGACCGACCATGAAAGAAGTTGCAGTCGAGTTGGAAATGATTAGATCTCAAATTACAGTGGTTGAAAGAGAAGAAAATGGTGATCTGATTGAGGATGAAGACGAATATGGTGTGGTTGAAATAGCCATGGATGCAGCAAGCAAGGAAACTGGGGCAACCTCCATGTCGGAGCATTCTGATTCACACCCATTGCTGTTCAGTGACTGA 1119 45.49 MKKQKEMFFKRNGGLLLQQLSATETGIKKSRMFSAEELMKATDQYNENRILGKGGQGTVFKGMMTDGQIVAVKKSKIENNSLLEQFINEVVILSQINHRNVVKLLGFCLESEVPLLVYEYIQNGTLFQHLHEPNEDFPFTWNMRLRIAVEIASALSYLHSAASIPIYHRDIKSTNILLDEKYVAKVSDFGASKSFAVDQTHMTTKVQGTFGYLAPEYFQSNQFTEKSDVYSFGVVLTELLTGQKPISSTRSEEEKNLTAMFLRLMKENRLKEILDPRISKDGTEEAMLSVGKLAKRCLNLNGKKRPTMKEVAVELEMIRSQITVVEREENGDLIEDEDEYGVVEIAMDAASKETGATSMSEHSDSHPLLFSD 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 51096531 51097649 - Bma015816.1 Bma02g01003 78253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01003 372 PANTHER PUTATIVE-RELATED 2 330 - -
Bma02g01003 372 Gene3D Phosphorylase Kinase; domain 1 17 120 - -
Bma02g01003 372 Pfam Protein kinase domain 45 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01003 372 Gene3D Transferase(Phosphotransferase) domain 1 121 341 - -
Bma02g01003 372 SMART serkin_6 45 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01003 372 MobiDBLite consensus disorder prediction 353 372 - -
Bma02g01003 372 SUPERFAMILY Protein kinase-like (PK-like) 29 313 IPR011009 -
Bma02g01003 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Bma02g01003 372 MobiDBLite consensus disorder prediction 351 372 - -
Bma02g01003 372 ProSiteProfiles Protein kinase domain profile. 45 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01003 372 CDD STKc_IRAK 51 316 - -
Bma02g01003 372 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 2 330 IPR045274 GO:0007166
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01003 Bma-Chr2:51096531 Bma14g00234 Bma-Chr14:2834272 0 dispersed
Bma02g01002 Bma-Chr2:50829937 Bma02g01003 Bma-Chr2:51096531 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66368 PF00069 Pkinase 2.80E-56 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01003 - - rcu:8286731 479.944