Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01017 ATGAAGGCCAAACCTTTACCCTTTGAAGAGATTAGAGTAAAGGGGGTGCTTGATTTTACGTCTTCTACGTCTGAATCTTTTCTCCGATTTCCTCAGTCGCCTCTGCAAAAGTGGAAGAATACGGAGGAGGAAAATTGCTATGTGGGTACTGAACCCACTTCAGTTCTCGACACTAAAAGAAGTCCAAGCCCTCCTGCGTCTACTTCCACGCTATCTTCTTCTCTCGGCGGCGGCGGGGACGCCGGTTCCGGTTGGGAGACGGCGGGGGCAGCCAAAGTCTTTGAGAACCCACCTGCTTTAGAAAAATGTGGGGTTGCAATGGAGGAATGGGAGATTGATTTTTCTGAATCCTCCGGCCAAGAACAGTCTATTTCTACTTTGATTATGGGAGATATTGAAGACCCGTCTTTTGGGCTGAATAAGTTCATCAGAAGTGGGAGTAATTCTCAGCAAGATTTGGAGTTTTCTGGGAATTTCAGCTTTATGGATCAAGGGTTTGTTTTGGATTCCATTAACGCTGCTCCAGATCTGCTAAATGGTCGTTCTGATTTTCATTTTCACGGCCAAAATTCCATGTTTTCTGACCCAGCTACCAATCCTTTACCATTTTCGCTGAGCTCCGGTGTGTTTCAAACTCAACAAGAGCAGCAATTGGTCGAGGTTTTAGATGAAAAGCCTCAAATTTTTGATACCCGGATGATGATTAACCAAAATCAAACTCAGTTTACCCAAAATCCAGCTATGTTTATGCCTTTAACATACTCTCAGTTACAAGAACACCATCTCTCACCCCCACCGGCAAAAAGGCTGAACTTTCAGATTCCCAAGGCTCCACTTTCAGACCCTGAGGAGGAGCTTCTTCTCCGGCAACAGTATCAACAGAAGGCCCAGTTGCTCTCTCATCAGCTTCGAAAAAGGCCAACAATGGCGAATCAGCAGCTTCAGCAGAGTATAACCGATCAGCTATTCAAGGTAGCAGAGCTAATCGAAAATGGCAATCAGGTTCTGGCACAAGGGATATTGGCGCGGCTCAATCACCAGCTTTCTCTTATTGGTAAGCCTTTTCAAAGGGCTGCTTACTATTTCATGGAGGCCTTTGCATCTTTTCTTAACATGAACACCTCCAATTCTTCTAGTCTATCACCTTTTACTCTCCTTTTCAAGATTGGAGCTTACAAATCATTTTCGGAAATCTCGCCCGTTCTTCAATTTGCTAATTTCACTTGCAATCAAGTTCTCCTAGAAGCTATCGACGGGTATGATCGTGTTCATATCATCGATTTTGATATCGGGTATGGTGGACAGTGGGCTTCTTTTCTTCATGAGCTTGCTATGAGAAATGGTGGACCTCCGTATCTTAAACTCACTGCCATTGTAGCTCCCTCTCCCTCCCCCTCCACACACAGCGATCTTGAGCTTAGTTTCACAAAAGAGAACTTGAAACGATTTGCGAGTGACTTAAACATGTCGTTTGAGCTTGAAATCGTGAATCTCGAATCTTTAATCTCAGGTTCTTGGTCATTACCTTTTCCTGCTTTGGAGAACGAGGCAATTGCAGTAAATTTTCCGATTTCCTCCTTTTCAAACCACCTGATGTCGTTGCCTTTGATTCTCCGCTTTGTGAAGCAAATCTCGCCGACAATCGTGGTTTCTCTCGACAAAATTTGTGACGAATTTGATACCCCATTTCCACACCATATCATAAACTCCCTCCATTACTACTCGAGCATGCTCGAATCACTAGACGCAACAAATGTAAACTCGGAAGCCCTTCAAAAGATTGAGAAGTACTTGCTTCAACCAGGCATCGAGAAACTCATTCTGGGTCGTCTCTGTTCGCCCGGACGTACACTCCCATGGCGAACTCTGTTTTTATCGTCTGGTTTTTCTCCATTGATTTGCAGTAACTTTGCAGAATCTCAAGCAGAGTGTTTGGTCCACCGGACTCCTGTTAGGGGCTTCCACATCGAGAAGAAACAGGCCTCGCTCGCCCTTTGCTGGCAGCAGAAAGAGCTCATCGCCGTCTCGGCTTGGAGGTGCTGA 2043 45.18 MKAKPLPFEEIRVKGVLDFTSSTSESFLRFPQSPLQKWKNTEEENCYVGTEPTSVLDTKRSPSPPASTSTLSSSLGGGGDAGSGWETAGAAKVFENPPALEKCGVAMEEWEIDFSESSGQEQSISTLIMGDIEDPSFGLNKFIRSGSNSQQDLEFSGNFSFMDQGFVLDSINAAPDLLNGRSDFHFHGQNSMFSDPATNPLPFSLSSGVFQTQQEQQLVEVLDEKPQIFDTRMMINQNQTQFTQNPAMFMPLTYSQLQEHHLSPPPAKRLNFQIPKAPLSDPEEELLLRQQYQQKAQLLSHQLRKRPTMANQQLQQSITDQLFKVAELIENGNQVLAQGILARLNHQLSLIGKPFQRAAYYFMEAFASFLNMNTSNSSSLSPFTLLFKIGAYKSFSEISPVLQFANFTCNQVLLEAIDGYDRVHIIDFDIGYGGQWASFLHELAMRNGGPPYLKLTAIVAPSPSPSTHSDLELSFTKENLKRFASDLNMSFELEIVNLESLISGSWSLPFPALENEAIAVNFPISSFSNHLMSLPLILRFVKQISPTIVVSLDKICDEFDTPFPHHIINSLHYYSSMLESLDATNVNSEALQKIEKYLLQPGIEKLILGRLCSPGRTLPWRTLFLSSGFSPLICSNFAESQAECLVHRTPVRGFHIEKKQASLALCWQQKELIAVSAWRC 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 51424801 51426843 + Bma015835.1 Bma02g01017 78267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01017 680 ProSiteProfiles GRAS family profile. 309 679 IPR005202 -
Bma02g01017 680 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 679 IPR005202 -
Bma02g01017 680 MobiDBLite consensus disorder prediction 51 82 - -
Bma02g01017 680 MobiDBLite consensus disorder prediction 51 77 - -
Bma02g01017 680 PANTHER SCARECROW-LIKE PROTEIN 6 41 679 - -
Bma02g01017 680 Pfam GRAS domain family 319 679 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01017 Bma05g01129 CCT
Bma02g01017 Bma04g00970 CCT
Bma02g01017 Bma06g01388 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01017 Bma-Chr2:51424801 Bma06g01388 Bma-Chr6:50649024 0 dispersed
Bma02g01017 Bma-Chr2:51424801 Bma04g00970 Bma-Chr4:15418176 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56906 PF03514 GRAS 3.70E-89 CL0063 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01017 - - jre:109015811 742.651