Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01031 ATGTCAGTGTACGATTCTGCATTTGTAAGTACGGAGCTCTCAAAGCCCACATCGATTTTTGGCCTCCGATTATGGGTGGTAATCGGAATTTTAATAGGCACCCTCATAGTTCTCGCTCTCTTCCTACTCTCTCTCTGTCTCACATCCCGAAAACGGAGCCGGAATCGAGGGCAAAATCACATGCTTAAATCCGCCACCTCTCACTCCACTCCGGCGGTTTCCAAAGAGATCCAAGAAATCGTGCACCACACCGCGCCAGATCTCCACCATCCACAGCCAGAAATCCAAGTCGAGATCGGAAAAGTGGAGCACCGGGTGGTTTTCTCGGACAGGCCCTCTAGTGGCGAGAGCCGCGCCGGTGTTAGTGAAACTACTTCATTTGGATCCGGTACTGTCGGACCCGAGGTTTCGCACCTTGGTTGGGGTAGATGGTATACACTGAGAGAGCTTGAGGCTGCAACTAATGGATTGTGCGAAGAAAATGTGGTTGGAGAAGGAGGATATGGGATAGTCTACCGAGGTGTTTTAGGGGATGGTACGAGAATTGCAGTCAAGAATCTTCTCAACAACAGGGGTCAAGCAGAGAAGGAATTTAAAGGGGAAGTTGAAGCAATTGGTCGTGTGAGACATAAGAATCTTGTAAGGTTACTTGGATACTGCGTTGAGGGTGCATACAGAATGCTTGTCTATGAGTATGTAGACAATGGTAATCTAGATCAATGGCTTCATGGTGATGTTGGTGAGATCAGCCCTCTAACTTGGGATATTCGTATGAACATTATCTTAGGAACAGCTAAAGGATTGGCCTACCTTCATGAAGGCCTTGAACCCAAAGTCGTTCATCGTGACGTAAAATCTAGCAACATTTTACTATGTCGCCAATGGCATCCTAAGGTTTCCGATTTTGGGCTTGCCAAACTCCTATACTCAGAGAGGAGTTATGTGACGACTCGTGTGATGGGAACATTTGGTTATGTTGCCCCTGAATATGCTTGCACTGGAATGCTGAATGAGAAGAGCGATATATATAGCTTTGGAATACTAATCATGGAACTAATTTCCGGACGGACTCCAGTTGATTACAATAGAGCTAAAGGAGAGATCAATTTGGTGGAGTGGTTAAAAACCATGGTTGGGAACCGAAAATCAGAAGAAGTAGTTGATCCCAAGTTGCCTGAAATGCCTTCTTCAAAAGCACTTAAACGGGTTTTGCTTGTTGCTCTTCGATGTGTTGATCCCGACGCCACAAAGAGGCCTAAAATGGGACATATTATACACATGCTTGAGGCAGATGACCTCCTATTTCGTGATGAACGGCGCTCTGGGAAAGAGTCGTCCCGCGCAATTATAAATCATCAACAAGAGAATCATGGCATTGGAGAAAATGAACATGGAGGCGAAGGGCCATCTAATCCATCCGAACATAAAAATGGTGGAAACCGTAGTCAGCCAGCTAGGTGGAGATAA 1467 45.94 MSVYDSAFVSTELSKPTSIFGLRLWVVIGILIGTLIVLALFLLSLCLTSRKRSRNRGQNHMLKSATSHSTPAVSKEIQEIVHHTAPDLHHPQPEIQVEIGKVEHRVVFSDRPSSGESRAGVSETTSFGSGTVGPEVSHLGWGRWYTLRELEAATNGLCEENVVGEGGYGIVYRGVLGDGTRIAVKNLLNNRGQAEKEFKGEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLDQWLHGDVGEISPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLCRQWHPKVSDFGLAKLLYSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMELISGRTPVDYNRAKGEINLVEWLKTMVGNRKSEEVVDPKLPEMPSSKALKRVLLVALRCVDPDATKRPKMGHIIHMLEADDLLFRDERRSGKESSRAIINHQQENHGIGENEHGGEGPSNPSEHKNGGNRSQPARWR 488
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 51757241 51760358 - Bma015850.1 Bma02g01031 78281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01031 488 PANTHER OS01G0323000 PROTEIN 2 451 - -
Bma02g01031 488 CDD STKc_IRAK 163 429 - -
Bma02g01031 488 SMART serkin_6 157 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01031 488 Gene3D Transferase(Phosphotransferase) domain 1 233 444 - -
Bma02g01031 488 ProSiteProfiles Protein kinase domain profile. 157 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01031 488 Pfam Protein kinase domain 160 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01031 488 ProSitePatterns Protein kinases ATP-binding region signature. 163 185 IPR017441 GO:0005524
Bma02g01031 488 Gene3D Phosphorylase Kinase; domain 1 139 232 - -
Bma02g01031 488 MobiDBLite consensus disorder prediction 115 130 - -
Bma02g01031 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Bma02g01031 488 SUPERFAMILY Protein kinase-like (PK-like) 136 429 IPR011009 -
Bma02g01031 488 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 451 - -
Bma02g01031 488 MobiDBLite consensus disorder prediction 110 130 - -
Bma02g01031 488 MobiDBLite consensus disorder prediction 443 488 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01031 Bma-Chr2:51757241 Bma05g00040 Bma-Chr5:2169428 0 dispersed
Bma02g01031 Bma-Chr2:51757241 Bma07g00491 Bma-Chr7:5987505 1.71E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66370 PF00069 Pkinase 2.00E-45 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01031 - - csv:101219288 780.015