Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01110 ATGGAGTCATTCCCCGGCTTGGTGTTGCCGGAAAGTAATGGAATAATTAGAAAGACGGAGCCTCCTAATGCCGACGCAGAGTTTGCTGAGAAAGATCCCACTGGTCGATATGTCCGGTACAATGAAATTCTTGGCAAAGGTGCTTTCAAGACTGTTTACAAGGCATTCGATGAAGTCGATGGAATTGAAGTTGCTTGGAACCAAGTGAGGATTGATGTCGTTTTACAGTCGCCAGAAGATTTTGAAAAATTGTATTCTGAAGTGCACTTGCTTAAATCGTTGAAGCACGAGAACATCATTAAGTTCTATAATTCTTGGGTAGATGATAAGAAGAAAACTATCAATATGATTACCGAGCTCTTCACATCAGGCAATCTACGGCAATATCGGAAAAAGCATAAGAATGTCGATATGAAAGCTATCAAGAATTGGGCACGGCAAATTCTCAGGGGTTTGGTCTATCTTCACAGTCATAATCCTCCAATTATTCATAGAGATATAAAATGTGACAATATTTTTGTAAATGGAAACCACGGAGAAGTTAAAATTGGAGACCTCGGATTGGCAACTGTCATGCAACGGCCAACAGCTCGGAGTATCATTGGAACCCCTGAATTTATGGCTCCTGAGCTTTATGAAGAGGAATATAACGAACTTGTAGACATATATTCTTTTGGAATGTGTATGCTTGAGATGGTTACTTTCGATTATCCATATAGTGAATGCAAAAATCCAGCTCAAATTTATAAGAAGGTTACCTCTGGAATTAAACCTGCTTCCCTCTATAATGTTTCTGATCCCGAAATCAAGGAGTTCATAGAGAAATGTCTTGTTCCGGTGCAGGATAGATTGTCTGCTGCAGAGCTCCTTGAAGATTTATTCCTTCGGACTGAGAATCTGAAGGAGCCAATTCATAATCCCTTACAGTTACCCAACCACAGTCTGGATGCGTTAAATGTGTCAAAGTCCGAGGCACTTTCAATGGACATAGATATCGACGATAGACAACTTTCTTCGAGCAATTTTACGGGAAGCAACAACGGAAGTCCAGATTGTCCACTTTTGGAATTTCATAGGATGCATAACGACAAGGAATTTAGGTTGATAGGGAAGAAAAATAATGAGAATTCAGTTTCATTAAACTTGCGTATCGCTGACTTATGCGGTCGAGTCAGGAATATACATTTTCTGTTTTACCTTGATTCTGATACTGCACTTTCTGTGGCTGCTGAGATGGTTGAGCAATTGGAATTAGCAGATCAAGATGTAGATTTCATTGCTGAGTTTATTGATTGCTTGATCATGAACCTTATACCTTGTTGGAAACATTTATCAAGTTATTTCGGAAACAGAGAAAGAACTTCTAGCAGTGGCTTTTCTCTCCATAACAATGGAAAAACCTCTACTGATTGTCTATGGGATTCGATTTTGAGTGGTATTCCTTCAGGGCTTGTGGACGATCAAGATGCATTCTCCAGATCGATAAATTCCGACAAAAACTGTATGCAAGATGAGGATATAAGCTGGTCCGATAATCCTACCGGATCCATTTTTAAAGCCGAATGCAGTTCTGCAAATCCGGGTAATTTTGCAGATCAACATTTACGTGCTTCGACTGATTCTGAGATCATTGTTGAAGATGACTCCAATAAGAATGATAAAACAGAGGAATTTGATTCAAATCTTGGAGGAAACTCAGAGGGGTCCAGTTGGTATTCTTCTGAACTCGATTGTTTCTCCGAGGACTGCAAATTGGAGAGAAATGAAAGCAACAGGGGGGAATCATCCTCGACGGATGAATTTTCGAAGAATATGGAATTGTCGTTTCACGACCCTTGCGGAACATCCAACGTCATGAGCCTGACAAGTAGTTGTTCTTCACTATCCTTGTCTGAAAAAGATCTGGATGTCGACCTAAAATTGGAGCTGGATGCCATAGAAGCACAATACAAGCAATGGTTTCAAGAACTTGCTAAAATGAAGGAAGAAGCATTGGATGCTACAAGAAAGAGATGGACGGCGAAGAAAAAACTTGCTTTATAA 2043 39.94 MESFPGLVLPESNGIIRKTEPPNADAEFAEKDPTGRYVRYNEILGKGAFKTVYKAFDEVDGIEVAWNQVRIDVVLQSPEDFEKLYSEVHLLKSLKHENIIKFYNSWVDDKKKTINMITELFTSGNLRQYRKKHKNVDMKAIKNWARQILRGLVYLHSHNPPIIHRDIKCDNIFVNGNHGEVKIGDLGLATVMQRPTARSIIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMVTFDYPYSECKNPAQIYKKVTSGIKPASLYNVSDPEIKEFIEKCLVPVQDRLSAAELLEDLFLRTENLKEPIHNPLQLPNHSLDALNVSKSEALSMDIDIDDRQLSSSNFTGSNNGSPDCPLLEFHRMHNDKEFRLIGKKNNENSVSLNLRIADLCGRVRNIHFLFYLDSDTALSVAAEMVEQLELADQDVDFIAEFIDCLIMNLIPCWKHLSSYFGNRERTSSSGFSLHNNGKTSTDCLWDSILSGIPSGLVDDQDAFSRSINSDKNCMQDEDISWSDNPTGSIFKAECSSANPGNFADQHLRASTDSEIIVEDDSNKNDKTEEFDSNLGGNSEGSSWYSSELDCFSEDCKLERNESNRGESSSTDEFSKNMELSFHDPCGTSNVMSLTSSCSSLSLSEKDLDVDLKLELDAIEAQYKQWFQELAKMKEEALDATRKRWTAKKKLAL 680
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 52807160 52810078 + Bma015931.1 Bma02g01110 78360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01110 680 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Bma02g01110 680 Coils Coil 643 670 - -
Bma02g01110 680 SUPERFAMILY Protein kinase-like (PK-like) 31 295 IPR011009 -
Bma02g01110 680 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01110 680 PANTHER KINASE DOMAIN PROTEIN 7 678 - -
Bma02g01110 680 Gene3D Transferase(Phosphotransferase) domain 1 121 301 - -
Bma02g01110 680 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 678 - -
Bma02g01110 680 CDD STKc_WNK 36 295 - -
Bma02g01110 680 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01110 680 Pfam Protein kinase domain 41 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01110 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Bma02g01110 680 MobiDBLite consensus disorder prediction 547 568 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01110 Bma-Chr2:52807160 Bma06g00570 Bma-Chr6:30651802 0 dispersed
Bma02g01110 Bma-Chr2:52807160 Bma09g00404 Bma-Chr9:34113175 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66372 PF00069 Pkinase 2.70E-53 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01110 K08867 - jre:108986606 842.802