Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma02g01149 | ATGGATCAAGTATCAGCACAGGGCCGTCCAATCCTACCACCTTTTCTCTCTAGGGATCTTCATCTCCACCCTCGTCACCAATTCCAGTATCACCAGCAGCAAAACTCTGAAGACGAGCAGAGCGGCAATGGAATCATAAACCACGGCCCGAAAAGAGAGCGAGATGAAAACAACACCTCCTCTACAACGAAGGCCGCCACACCGGAGAGCAAAGAGCTCAGCAACAACGTAGGAGGAGATGGAGAAATCACAAGAAGGCCTAGAGGCAGACCGGCTGGTTCAAAAAACAAGCCTAAACCACCGATCATAATCACTAGAGACAGCGCAAACGCCCTCCGATCTCTCGTCATGGAAATCACCACCGGCTGTGATATTATGGAGAGTATTTCAACCTTCGCAAGAAGAAGACAGAGAGGGATTTGTATTCTGAGTGGAAGTGGAACAGTAACTAATGTCACTCTGAAACAACCAGCTTCTCCCGGAGCAGTGGTCACTCTACATGGAAAATTTGAGATTCTCTCACTTTCCGGCTCGTTTCTGCCACCTCCGGCGCCGGCTGCAGCTTTCGGGTTGACCATTTACTTGGCTGGTGGACAAGGACAGGTGGTCGGAGGAAGTGTGGCTGGGCCGCTTTTAGCTTCAGGGCCGGTGGTTATCATGGCTGCTTCTTTTGGAAATGCAGCATATGAGAGGCTGCCCATCGATGATGACGAGACTCCGGTGCCGGTTCCGGGAAGTGGACCAGTCGGATCGCCGGGAATTCTTGGACAGCAGCAACAACCACTCTTTCCAGATCCCACCTCGTCTATGTTTCATGGAATGCCTCCTAATCTCTTGAATTCATGTCAATTACCTTCTGAGGGCTATTGGAGCACTGGTCGTCCTCCTTTTAATTAA | 897 | 50.61 | MDQVSAQGRPILPPFLSRDLHLHPRHQFQYHQQQNSEDEQSGNGIINHGPKRERDENNTSSTTKAATPESKELSNNVGGDGEITRRPRGRPAGSKNKPKPPIIITRDSANALRSLVMEITTGCDIMESISTFARRRQRGICILSGSGTVTNVTLKQPASPGAVVTLHGKFEILSLSGSFLPPPAPAAAFGLTIYLAGGQGQVVGGSVAGPLLASGPVVIMAASFGNAAYERLPIDDDETPVPVPGSGPVGSPGILGQQQQPLFPDPTSSMFHGMPPNLLNSCQLPSEGYWSTGRPPFN | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 53432008 | 53432904 | - | Bma015983.1 | Bma02g01149 | 78399 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma02g01149 | 298 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 114 | 225 | IPR005175 | - | |
Bma02g01149 | 298 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 109 | 244 | - | - | |
Bma02g01149 | 298 | CDD | DUF296 | 113 | 224 | IPR005175 | - | |
Bma02g01149 | 298 | MobiDBLite | consensus disorder prediction | 1 | 102 | - | - | |
Bma02g01149 | 298 | MobiDBLite | consensus disorder prediction | 27 | 43 | - | - | |
Bma02g01149 | 298 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 5 | 297 | IPR014476 | GO:0003680 | |
Bma02g01149 | 298 | PIRSF | ESCAROLA | 18 | 297 | IPR014476 | GO:0003680 | |
Bma02g01149 | 298 | ProSiteProfiles | PPC domain profile profile. | 109 | 247 | IPR005175 | - | |
Bma02g01149 | 298 | MobiDBLite | consensus disorder prediction | 60 | 74 | - | - | |
Bma02g01149 | 298 | MobiDBLite | consensus disorder prediction | 236 | 258 | - | - | |
Bma02g01149 | 298 | Gene3D | - | 112 | 241 | - | - | |
Bma02g01149 | 298 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 18 | 5 | 297 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g01149 | Bma-Chr2:53432008 | Bma04g00797 | Bma-Chr4:9100592 | 1.28E-107 | dispersed | |
Bma06g01590 | Bma-Chr6:52144263 | Bma02g01149 | Bma-Chr2:53432008 | 1.68E-57 | dispersed | |
Bma02g01149 | Bma-Chr2:53432008 | Bma05g00788 | Bma-Chr5:44846922 | 1.59E-103 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma02g01149 | - | - | jre:108980480 | 440.654 |