Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma02g01165 | ATGGCCGGTTTGGACTTAAGCTCTGCTTCTCGTTTCGTTCATCAACTTCAACAGCGCCCGGACCTTCATCTTCAACGACCTCCCGCCGGCGATGATTCCTTCAACCGGAACCACTTTGCTGGAGCCGACGATGATGACGACGACAATACCCACCAAGGCCTCGACCTAATCACTTCAAACGCTGGACCCGGCGACATCGTTGCTCGCCGGCCCAGAGGTCGACCTCCAGGCTCCAAAAACAAGCCGAAACCGCCGGTGATCATTACAAGAGAGAGCGCAGATACTTTACGGGCTCATATACTAGAGGTCAGCTCCGGCTCCGATGTGTTTGAGTCTGTGGCGACGTATGCCCGGAAGCGTCAGCGAGGGATCTGTATATTAAGCGGAAGTGGAACTGTGACTAACGTCAGCTTACGTCAACCCTCTTCAGCCGGAGCTATCGTCACGCTTCACGGCCGGTTTGAGATACTATCTTTAACGGGCTCGTTTTTGCCCCCACCAGCGCCTCCGGGCGCTACCAGTTTGACGATATTCCTGGCCGGCGGACAAGGTCAAATTGTCGGAGGAAATGTGATCGGTGCTTTGATCGCCGCCGGTCCGGTCATCGTTATCGCATCTTCGTTCACAAACGTGGCTTACGAGAGATTACCGTTGGACGAAGAGGAGCCCATTCAGCAGCAGTCAGGGGAAGGATCAGGCCCCGGTTCCGGCGGAAATAACCCGTTTCCCGACCCTTCTTCTGGTTTGCAGTTCTTCAATCTGCCAAATCAAAGTCAGCTTCCGGTCGACGGGTGGGCCGGAAATTCCGCCGGAAGGTCTTCTTATTAA | 828 | 54.95 | MAGLDLSSASRFVHQLQQRPDLHLQRPPAGDDSFNRNHFAGADDDDDDNTHQGLDLITSNAGPGDIVARRPRGRPPGSKNKPKPPVIITRESADTLRAHILEVSSGSDVFESVATYARKRQRGICILSGSGTVTNVSLRQPSSAGAIVTLHGRFEILSLTGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVIGALIAAGPVIVIASSFTNVAYERLPLDEEEPIQQQSGEGSGPGSGGNNPFPDPSSGLQFFNLPNQSQLPVDGWAGNSAGRSSY | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 53776721 | 53777548 | - | Bma016006.1 | Bma02g01165 | 78415 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma02g01165 | 275 | ProSiteProfiles | PPC domain profile profile. | 93 | 230 | IPR005175 | - | |
Bma02g01165 | 275 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 1 | 275 | IPR014476 | GO:0003680 | |
Bma02g01165 | 275 | MobiDBLite | consensus disorder prediction | 221 | 275 | - | - | |
Bma02g01165 | 275 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 97 | 210 | IPR005175 | - | |
Bma02g01165 | 275 | MobiDBLite | consensus disorder prediction | 225 | 275 | - | - | |
Bma02g01165 | 275 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN | 1 | 275 | - | - | |
Bma02g01165 | 275 | MobiDBLite | consensus disorder prediction | 17 | 86 | - | - | |
Bma02g01165 | 275 | CDD | DUF296 | 97 | 208 | IPR005175 | - | |
Bma02g01165 | 275 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 93 | 222 | - | - | |
Bma02g01165 | 275 | Gene3D | - | 96 | 227 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02587 | Bma-Chr1:83506095 | Bma02g01165 | Bma-Chr2:53776721 | 4.92E-48 | dispersed | |
Bma02g00110 | Bma-Chr2:1002028 | Bma02g01165 | Bma-Chr2:53776721 | 1.73E-51 | dispersed | |
Bma02g00799 | Bma-Chr2:42840999 | Bma02g01165 | Bma-Chr2:53776721 | 1.38E-65 | dispersed | |
Bma02g01165 | Bma-Chr2:53776721 | Bma05g01075 | Bma-Chr5:49485995 | 1.44E-71 | dispersed | |
Bma03g00140 | Bma-Chr3:1061309 | Bma02g01165 | Bma-Chr2:53776721 | 4.72E-76 | dispersed | |
Bma04g00433 | Bma-Chr4:3552874 | Bma02g01165 | Bma-Chr2:53776721 | 1.06E-18 | dispersed | |
Bma04g00797 | Bma-Chr4:9100592 | Bma02g01165 | Bma-Chr2:53776721 | 1.07E-69 | dispersed | |
Bma07g01622 | Bma-Chr7:51775117 | Bma02g01165 | Bma-Chr2:53776721 | 4.89E-78 | dispersed | |
Bma08g01008 | Bma-Chr8:49104811 | Bma02g01165 | Bma-Chr2:53776721 | 2.01E-72 | dispersed | |
Bma08g01108 | Bma-Chr8:50062189 | Bma02g01165 | Bma-Chr2:53776721 | 9.58E-61 | dispersed | |
Bma07g00944 | Bma-Chr7:35383210 | Bma02g01165 | Bma-Chr2:53776721 | 1.40E-118 | transposed | |
Bma08g00707 | Bma-Chr8:42781882 | Bma02g01165 | Bma-Chr2:53776721 | 2.05E-72 | transposed | |
Bma11g00305 | Bma-Chr11:2870731 | Bma02g01165 | Bma-Chr2:53776721 | 2.66E-45 | transposed | |
Bma02g01165 | Bma-Chr2:53776721 | Bma06g01246 | Bma-Chr6:49618595 | 3.72E-157 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma02g01165 | - | - | nnu:104610369 | 393.66 |