Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01168 ATGCCTCCCAGGAAGAAGCTCAATTCGTCTTCCTCCTCCAAGAAATCTAATCCTAACCAACTCTCACAGCGTTCTAAATTCGGCATCCAACATTTTTTCGAGCGCCATTCTCAGAATACTGCACATCCTCGTAAGTGCAATTCTAGAGTTTCTGCTGTTCCGGTCCCTGAAAATGGTGCGGTTCCTGCTCCTTGCTATTCTGTTCCTAGCTCCGGGGACTCAGGGAACAGTAAGATTGATGGACCGGTTGGTCCGGAGGTGATCGATTTGACTCTGCCAGAGTCCGATTTAAAGGCTTCTGGTGTGAACGATGTGGTTTTAGCTTCAAAAAAGGCTTACGAGAATTCGAATTCTCTAGAGAGTATTGCGAATAATCCCTCTTTAGATAAGTCGTCCGAGGAATTGATGATTGTTGGTGTAAACGATTCCGGGGAGAATATTTCCGAGGCATCTCCAGAAGTTTGCAAATCTGTTCCTCTTAAGCGCTTCAAGTTCTCTCCGGGAATGTTGATTAAGGAGAGCCAGGATGATGGAAGTGATGAGATCATCTGGAAGATATCTCCAGTGAACGAAAGGCTCCATGCAGTTTCAAAGCAAATGCCAGAGACTGTAAGAGTGTTGGCCGAGTCGTCAAGGGTTAATTGTATGAAGATTAGACAATGCTCGCAAAATAAGGCTCCCCCTTGTAAGACTGAAAAGATTGAAAAGGGCACGTCATCTCCAGTGCTGAAGTCTTCTGAGTCATCTTTGGTATCGATGGGCGTGATCAGACCAAAAAGGTTTAAATCTGATAAAGGTATAGATTGCAATAAAATCTTATCTAATAATGGGAGTAATTCAGAAGTAGACAGCAGCCAAAGTCCATTTCGTACTCCTCCATCCTTATCTTACTGCCAAGATAAGGTTGCACAAGATGTTACATGTCGTGTGGCTGCAAATCAATTAAATTTAAGGCTACATAAGAGGGCACTGCTTGAGCTTTTAGACCAAGTGGAAGATGTCATTTCAGTTGATAATTCATTACTTAATGACTTGGAGGATTATCCATCGAAAGAGAAAGGTAGAAAGTTTGAGAAACAGCTTGTGACAACTGATCCGGCACTCAATATAATGGCCGTAGATGTACCAAAAAAGATCACTGGAGGTTTCAACGTTGATTTCCTTGTAAGCGAAAAGTGTGGATCTGCTGATTCATCAGCTGTTCAAACCCCATATAAGGTTCTTCGGTTACTGAATGAGAAAAATGGACAAGAGCGGGCAGCATATTTGTGGCAAGAGTGGTCCTACAGTGCTATTTCTCCTGGAGATACAGTGAACGTCATCGGTGAATTTGATGATGAAGGGAGATGTAATATTGACCATAACAATAATTTTATCATCCTTCACCCAGATATTCTAGTTTCTGGAACCCGGGTTGCTGCTAGTTTCAGCTGCCCAAGGCGGACTGTGATTGATGAGAGACTAAAATGTAATGAGCATTCAACTTCAGCATTACTGGGTACTTTACTGCACCAGATTTTTCAGGCTGGTCTTACGAAAGATGTACCTATTAAAGCTTTCTTGGAGGAATATGCGAGAGTAGTGGTTCAGAAAAGTATGGAAAATGTATATGCATGCGGAGCAAATGAAAAGGACATCAACAAAGCAATTCTTGAGGCCATTCCAAAAATATTGCGTTGGATCAATCTCTTCAAACACTCGAAGGTTCATGAGGCCCCAACTGTTGAATTCAGATCCGATGAGGGGCGTAAAAGAATAAGTATATCTGAGGTGATTGACATAGAGGAGATGGCATGGGCCCCAAGATATGGTTTGAAAGGAATGATTGATGCTTCTCTTCGCGTAAATGTTGCTTCGGATGAAAATCAAGTTACCGAGAGTATCATGCCTCTAGAGTTTAAAACTGGGAAAATGTCCACTGGACAGGCACTCCTCTATGGAACACATTGCTCAAGTGATCTTATACACATTGCTCATGTCAGGTACCAAAAACCTATTGGTTCTGGTCTGCTGTATTATCTTCAGTCAGATCAGACACAGGGGATTTCGGTTCAAAGGCCTGATATTGTTGGATTAATCATGCGTCGGAATGAGTTTGCAAATGATATTCATAACGCATCAAAGAAACAATCGCTTCCCCCTATGTTACAGAGTCTGAGCATGTGCAGAGGATGTCGACATCTTGATGTTTGTACCATTTATCATAAGGCACATGGCGGAAACACAGAAGGCAGTGGACTTGGAAATTTGTTTGATTCTCGAACTCAGCACTTAACAGGTGCTCATGGTCTTTTTCTTCGGCATTGGGAAAGGTTGATAGACTTAGAGGCTAAAGAGAGCGAGCTCGTGAAAAAACAGAGATGGAATTCTCGTAACTCGAACAATGATCAGCTCCCTAGTTCTCTTTCTTCTATGATTCTTGATGCTTCAGAGGAACATCCACTTGGGAATATACAGAAGGACAACCAATATGTTTATCGTTTTGTGAGTCCAGAGTTGTCTTCATCCAGATTAGAAGAATTTGGTGAAGACTATTTTAATTCTTCCTCTTCCTCAAATGATTTTGAAGGTTCACTCAAAAAGGGAGACCGTGTGATACTCAGTACAGAATCCAGCAATCTCAACGTTGCAAGTGGAATTATAACAGATATAAATCGTTTTCATGTTATTGTTTCTTTTTCCAAGCGGTTACGTCTTCCTGAAAGCAGTAATTCTTCTGAGGCAAACGATCTTCTACAGCAAGTCTGGAGGATTCACAAAGATATTTTTATGTCCATATTTGCAATCATGAGGTTTAATTTAGTGCAACTTTTTCTACAAGATGCTCATAGTGCTCATCTTAGGAAGTTGATTGTGAACCTTGAGCCTCCTAGATTTGATATTGGATGTACGCTCAGCCAAGATCCAGCAGTATCTTATGTGTGGTCAGAGAAGAATCTGAATGATGACCAACGACGAGCTATTCTGAAGATACTTACAGCCAAGGACTATGCTCTAATTCTAGGAATGCCAGGAACGGGCAAGACATCTACACTGGTACATGCTGTAAAGGCTCTGTTGATACGAGGTGCATCCATTTTGCTGACATCATACACTAACTCTGCCATTGACAATTTGCTTATTAAGCTAAGAGCTCAGAACATTGATTTTGTGCGTATTGGGAGATACAATGCTGTGCATGAGGAGATTCGGGGACACTGCTTTTCAGATCAACTTTTTGTAACAAAATGTTTTTGGTACTCAGATGTGCACAGTGTCGAAGATATCAGAATAAGAATGGACCAAGTCAAAGTTGTTGCAGTGACGTGTTTAGGAATTACAAGTCCTTTACTTGCCAACAAAAGATTTGATATATGCATCATGGATGAGGCTGGACAAACTACTCTCCCAGTATCTTTGGGGCCTTTGATGTTTGCTTCAGCATTTGTCCTTGTTGGCGACCATTATCAACTCCCTCCTCTTATTCAGAGTATGGAAGCTCGCGAAAATGGAATGGGGATAAGTTTGTTTTGCAGGCTCTCCGAGGCACATACTCAAGCAATTTCAGCATTGCAAAGCCAGTATCGCATGTGTCAAGGCATCATGGAACTATCAAATGCCCTGATATATGGAGACAGATTGCGCTGTGGTTCTCAAGATATAGCAAATGCCAAGCTTGAGCATTCAAACTTGAATTCTCATCCAATTTGGTTAAAGAAGAGGCAAATCATGAAATCCTTGAGAAATTTTTTAATTCAATCCTCCAAACTGGTTTTGTGGTTGCAGGTTTTAAATCCAAGCAAACCAGTAATATTTATTAATACTGGTTTTGTTTTTTACTATTTTAACAATGTAGATTTATTACCTGCGTACGAGGCAAAAGATCACAAGGCTCTGAATAACCATATTGAAGCTCAGATACTGGCAGAGGTCACACAAGGACTCGTTAGCACAGGAATCAATGGGAATGCTATTGGGATCATTACTCCTTATAATGCCCAGGCCAATCTCATCAGACACGTTGTTAACTTAACCTCTGTTGAGATACATACCATTGATAAATATCAGGGAAGAGACAAGGACTGCGTCTTGGTGTCCTTCGTCAGGTCAACTGAAAATCCCAAATACTGCAATTCTTCTTTGCTTGGAGACTGGCACAGAATTAATGTGGCCATCACACGTGCAAAGAAAAAGTTGATTATGGTGGGGTCATCCAAAACGTTATCAAGGATTCCACTCCTCAAGCTACTTATTGAGAAGGTTGATGAACAATCTGGCATCTTGACAGTATCCAACAAGGATATCCTTCATGGAAGAGGGCTGAGGGGATGCTCTAATATTGTAAGATAG 4329 41.26 MPPRKKLNSSSSSKKSNPNQLSQRSKFGIQHFFERHSQNTAHPRKCNSRVSAVPVPENGAVPAPCYSVPSSGDSGNSKIDGPVGPEVIDLTLPESDLKASGVNDVVLASKKAYENSNSLESIANNPSLDKSSEELMIVGVNDSGENISEASPEVCKSVPLKRFKFSPGMLIKESQDDGSDEIIWKISPVNERLHAVSKQMPETVRVLAESSRVNCMKIRQCSQNKAPPCKTEKIEKGTSSPVLKSSESSLVSMGVIRPKRFKSDKGIDCNKILSNNGSNSEVDSSQSPFRTPPSLSYCQDKVAQDVTCRVAANQLNLRLHKRALLELLDQVEDVISVDNSLLNDLEDYPSKEKGRKFEKQLVTTDPALNIMAVDVPKKITGGFNVDFLVSEKCGSADSSAVQTPYKVLRLLNEKNGQERAAYLWQEWSYSAISPGDTVNVIGEFDDEGRCNIDHNNNFIILHPDILVSGTRVAASFSCPRRTVIDERLKCNEHSTSALLGTLLHQIFQAGLTKDVPIKAFLEEYARVVVQKSMENVYACGANEKDINKAILEAIPKILRWINLFKHSKVHEAPTVEFRSDEGRKRISISEVIDIEEMAWAPRYGLKGMIDASLRVNVASDENQVTESIMPLEFKTGKMSTGQALLYGTHCSSDLIHIAHVRYQKPIGSGLLYYLQSDQTQGISVQRPDIVGLIMRRNEFANDIHNASKKQSLPPMLQSLSMCRGCRHLDVCTIYHKAHGGNTEGSGLGNLFDSRTQHLTGAHGLFLRHWERLIDLEAKESELVKKQRWNSRNSNNDQLPSSLSSMILDASEEHPLGNIQKDNQYVYRFVSPELSSSRLEEFGEDYFNSSSSSNDFEGSLKKGDRVILSTESSNLNVASGIITDINRFHVIVSFSKRLRLPESSNSSEANDLLQQVWRIHKDIFMSIFAIMRFNLVQLFLQDAHSAHLRKLIVNLEPPRFDIGCTLSQDPAVSYVWSEKNLNDDQRRAILKILTAKDYALILGMPGTGKTSTLVHAVKALLIRGASILLTSYTNSAIDNLLIKLRAQNIDFVRIGRYNAVHEEIRGHCFSDQLFVTKCFWYSDVHSVEDIRIRMDQVKVVAVTCLGITSPLLANKRFDICIMDEAGQTTLPVSLGPLMFASAFVLVGDHYQLPPLIQSMEARENGMGISLFCRLSEAHTQAISALQSQYRMCQGIMELSNALIYGDRLRCGSQDIANAKLEHSNLNSHPIWLKKRQIMKSLRNFLIQSSKLVLWLQVLNPSKPVIFINTGFVFYYFNNVDLLPAYEAKDHKALNNHIEAQILAEVTQGLVSTGINGNAIGIITPYNAQANLIRHVVNLTSVEIHTIDKYQGRDKDCVLVSFVRSTENPKYCNSSLLGDWHRINVAITRAKKKLIMVGSSKTLSRIPLLKLLIEKVDEQSGILTVSNKDILHGRGLRGCSNIVR 1442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 53835163 53847327 + Bma016010.1 Bma02g01168 78418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01168 1442 CDD SF1_C_Upf1 1190 1412 IPR041679 -
Bma02g01168 1442 PANTHER DNA2/NAM7 HELICASE FAMILY 2 1440 IPR045055 -
Bma02g01168 1442 MobiDBLite consensus disorder prediction 1 36 - -
Bma02g01168 1442 PANTHER DNA REPLICATION ATP-DEPENDENT HELICASE/NUCLEASE DNA2-LIKE 2 1440 - -
Bma02g01168 1442 Pfam DNA replication factor Dna2 413 614 IPR014808 -
Bma02g01168 1442 Gene3D - 1188 1431 IPR027417 -
Bma02g01168 1442 MobiDBLite consensus disorder prediction 1 48 - -
Bma02g01168 1442 CDD DEXXQc_DNA2 979 1189 - -
Bma02g01168 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 978 1406 IPR027417 -
Bma02g01168 1442 Pfam AAA domain 1167 1398 IPR041679 -
Bma02g01168 1442 Gene3D - 930 1187 IPR027417 -
Bma02g01168 1442 Pfam AAA domain 979 1071 IPR041677 GO:0004386
Bma02g01168 1442 Pfam AAA domain 1093 1157 IPR041677 GO:0004386
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01168 Bma-Chr2:53835163 Bma10g00200 Bma-Chr10:1781137 5.05E-45 dispersed
Bma02g01168 Bma-Chr2:53835163 Bma07g00979 Bma-Chr7:37745529 1.93E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01168 K10742 - qsu:111998300 1677.92