Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01172 ATGGAGTTGGAGTTAATCTGGGTGGTGTTAGGCTGCGTGGTGGGGAGTTTGTACCCACTGAAACTGGCGTTGAAGAGTGTGAACTGGTGGCTGTACGAACGGAAGTTGGGGAAGAAGCAGAGCCGTCTTCCTCCCGGCGATCTAGGCTGGCCTTTCATCGGCAATATGTGGTCTTTCCTCCAAGCTTTCAAGTCCTCTCGCCCTGATTCCTTCCTCTCCTCCTTCTCCTCCAGATACGGGCAATCGGAAGTCTACAAGGCTTTCATGTTCGGGAGCCCGAGCGTGATCGTGACATCGCCGGAAACATGCCGGAGAGTTTTGAAGGACGACGAGTGTTTTCAACCAGGGTGGCCTCCTTCGACCATGAAACTCATCGGAGAGAAGTCGTTCATCGGAATATCTCCGCAGGAACATAAGCGTCTTCGCCGGTTAACGGCGGCCCCGGTCAACGGCGACGAGGCGTTGTCGATGTACACCAAGTATATCGAGGAAAACGTGACGGCTTCGCTGCAGAAATGGGCGGAAATGGGAGAGATAGAGTTCTTAACTCAACTGAGAAAGCTTACTTTTCAGATAATAATGTACATCTTCCTTAGCTCGGAGAGTGAGCCTGTAATGGAGAGACTGGAGAGGGAATACACAAAACTTAACTATGGAATTAGAGCCATGGCTATTAACATTCCTGGATTTGCTTACCACAAGGCTCTCAAGGCTCGTAGAAATCTTGTGAAGGCATTTCAATGGATCGTTGATGAGCGGAGAAGGGAGGTGAAGAAGAGGGAGGAGCCGGGCGAGAAGAGGGACATGATGGATGCTCTGCTTGAGGTTGAAGACGAAAATGGCAGAAAACTGAGCGATGACGAGATAATTGATGTTCTATTGATGTACTTAAATGCTGGCCATGAATCTTCTGGCCATATCACAATGTGGGCTACCATTTTCTTGCAGCAAAACCCAGAATTTTTCCAGAAAGCCAAGGAAGAGCAGGAGGATATCGTTAAGAGAAGACCTCCATCACAGAAGGGCATCAGTCTGAAAGAAATTCGAGAAATGGAGTATCTTTCCAAGGTGATTGATGAAACTCTCCGCGTGATAACCTTCTCACTGGTTGTTTTTCGAGAGGCGAAAGCTGATGTGAATTTAGGCGGTTATACAATTCCGAAGGGTTGGAAAGTTCTGGTTTGGTTCAGAAGTGTTCATTTGGATCCCAAAATATTCCCAAATCCCACGGAATTCAATCCTTCGAGATGGGATGGTTTTGTTCCAAGAGCTGGATCTTTCCTCCCCTTTGGAGCAGGAACAAGGACCTGCCCAGGAAATGATCTTGCTAAGCTCGAAATCTCCATTTTTCTTCACTATTTTCTCCTCCATTATCAACTAGAACAGATGAATCCAAAATGCCCAACCCAATACCTACCTCATACAAGGCCTAAAGATAATTGCTTGGCAAAACTCCATAAAATTTGCTGA 1470 47.07 MELELIWVVLGCVVGSLYPLKLALKSVNWWLYERKLGKKQSRLPPGDLGWPFIGNMWSFLQAFKSSRPDSFLSSFSSRYGQSEVYKAFMFGSPSVIVTSPETCRRVLKDDECFQPGWPPSTMKLIGEKSFIGISPQEHKRLRRLTAAPVNGDEALSMYTKYIEENVTASLQKWAEMGEIEFLTQLRKLTFQIIMYIFLSSESEPVMERLEREYTKLNYGIRAMAINIPGFAYHKALKARRNLVKAFQWIVDERRREVKKREEPGEKRDMMDALLEVEDENGRKLSDDEIIDVLLMYLNAGHESSGHITMWATIFLQQNPEFFQKAKEEQEDIVKRRPPSQKGISLKEIREMEYLSKVIDETLRVITFSLVVFREAKADVNLGGYTIPKGWKVLVWFRSVHLDPKIFPNPTEFNPSRWDGFVPRAGSFLPFGAGTRTCPGNDLAKLEISIFLHYFLLHYQLEQMNPKCPTQYLPHTRPKDNCLAKLHKIC 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 53878150 53881002 + Bma016014.1 Bma02g01172 78422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01172 489 PANTHER CYTOCHROME P450 26 16 477 - -
Bma02g01172 489 PRINTS B-class P450 signature 437 448 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 PRINTS B-class P450 signature 373 400 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 PRINTS B-class P450 signature 133 144 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 PRINTS B-class P450 signature 401 416 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 PRINTS B-class P450 signature 428 437 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 Gene3D Cytochrome P450 33 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 Pfam Cytochrome P450 44 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 SUPERFAMILY Cytochrome P450 39 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Bma02g01172 489 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma02g01172 489 PANTHER ENT-KAURENOIC ACID OXIDASE 2 16 477 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01172 Bma-Chr2:53878150 Bma06g01250 Bma-Chr6:49647104 0 dispersed
Bma09g00423 Bma-Chr9:35773756 Bma02g01172 Bma-Chr2:53878150 9.17E-48 dispersed
Bma11g00943 Bma-Chr11:41700452 Bma02g01172 Bma-Chr2:53878150 4.08E-31 dispersed
Bma02g01172 Bma-Chr2:53878150 Bma03g00991 Bma-Chr3:10712519 1.59E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01172 K04123 - jre:109009223 771.926