Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01204 ATGCTTTCTGGGTTTTTCCAGGAAAGTTCCAGAATGTATTCTGGTCTCCACTCTCTACCGATTGATGCCAAGTTTCAGGGATCTTTGGACGGAACCAACTTGCCCGGCGATGCTTGTTTAGTTCTTACTTCCGATCCGAAGCCTCGCCTCCGGTGGACAGCGGAGCTACACGAGAGATTCGTTGATGCCGTAACTCAGCTTGGTGGCCCTGAAAAAGCAACACCTAAGACTATAATGAGAACAATGGGAGTAAAAGGCTTAACCCTCTATCACTTGAAATCGCACCTCCAGAAATACCGGTTGGGGAAGCAATCCAGCAAGGAATTGGCCGAGAACATGAAGGATGGTATCGACTTTTGGCTCCTCTTTTATTCTCAGGTCTCTTCACATATTACTGTTTTTCTTCGTTTGAACAGTGGCTATCAGGTTACTGAAGCTTTGCGGGTTCAAATGGAAGTCCAGAGAAGACTGCATGAGCAGCTGGAGGTCCAGCGTCGGCTTCAACTTCGCATCGAAGCACAAGGAAAATACCTGCAATCAATTCTCGAGAAAGCGTGTCAAGCCTTAAACGATCAAACTGCTGCACAGGCCGCGCTTGAGGCTGCGAGAGAAGAGCTGTCCGAGCTAGAAATTAAGGTTTCAACCAATTATCGAGGAATGGGCTCTCGGGACACACTCAAAATGCCACCTTCCTTATCGGAACTCTCGGCAGCTCTTGAAAGTCGAAGTAGTGTTCCCAATATTCCTTCTCGTGTGGGAGATTGCTCTGTCGAAAGTTGCTTGACATCGGCAGGAAGCCCTGTTTCTCCCATGCGAAAAGGCTCGGCCACTGTCGTGATGGAGAAGAGACCGAGGTCCTTGTTCGGAAACGTAGACTCGATGTCTGTTGACCCAAACACGCGACAAGAAATCGAATGGATGATGACAAACATCGGATGA 939 48.46 MLSGFFQESSRMYSGLHSLPIDAKFQGSLDGTNLPGDACLVLTSDPKPRLRWTAELHERFVDAVTQLGGPEKATPKTIMRTMGVKGLTLYHLKSHLQKYRLGKQSSKELAENMKDGIDFWLLFYSQVSSHITVFLRLNSGYQVTEALRVQMEVQRRLHEQLEVQRRLQLRIEAQGKYLQSILEKACQALNDQTAAQAALEAAREELSELEIKVSTNYRGMGSRDTLKMPPSLSELSAALESRSSVPNIPSRVGDCSVESCLTSAGSPVSPMRKGSATVVMEKRPRSLFGNVDSMSVDPNTRQEIEWMMTNIG 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 54120400 54122531 - Bma016045.2 Bma02g01204 78454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01204 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 12 309 IPR044848 GO:0003700
Bma02g01204 312 Coils Coil 189 212 - -
Bma02g01204 312 Pfam Myb-like DNA-binding domain 50 100 IPR001005 -
Bma02g01204 312 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 47 102 IPR006447 GO:0003677
Bma02g01204 312 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Bma02g01204 312 Gene3D - 46 105 - -
Bma02g01204 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 104 IPR017930 -
Bma02g01204 312 PANTHER PROTEIN PHR1-LIKE 2 12 309 - -
Bma02g01204 312 Pfam MYB-CC type transfactor, LHEQLE motif 142 187 IPR025756 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01204 Bma06g01283 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01204 Bma-Chr2:54120400 Bma11g00043 Bma-Chr11:576963 9.23E-69 dispersed
Bma14g01215 Bma-Chr14:18590862 Bma02g01204 Bma-Chr2:54120400 2.74E-45 dispersed
Bma02g01204 Bma-Chr2:54120400 Bma06g01283 Bma-Chr6:49912101 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56919 PF00249 Myb_DNA-binding 2.60E-07 CL0123 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01204 - - rcu:8280672 398.282