Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01254 ATGATGGAACACAAGAGATGTCCTTACTCTGTTGATGAAAGTAGTCTCACTTCTCTTACGACGAAACGACAAAAGGCCGATTTTTCTATCTCCTCTAAGGAGAGAAAAGAGAAGGTTGGCGAACGAATTAATGCATTGCAGCAGCTTGTTTCTCCATATGGAAAGACGGATACAGCTTCTGTTCTTCTCGAAGCTATGGAATACATTCAGTTTCTCCACGAGCAAGTTAAGGTTTTGAGTGCTCCATACCTTCAAAGTTCGCCAATGGCAAAGAATAATATTCAGGAACTGGAGCTCTGTAGCTTGAGAAGTAGAGGTTTGTGCATTGTTCCAATTTCTTGTACCGTCGGAGTTGCTCGAAGCAATGGTGCAGACATCTGGGCTCCGGCCAAGTCAACTTCCCCGAAATTTGACAAATCGATCTCGCAATTCCAA 435 43.45 MMEHKRCPYSVDESSLTSLTTKRQKADFSISSKERKEKVGERINALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSSPMAKNNIQELELCSLRSRGLCIVPISCTVGVARSNGADIWAPAKSTSPKFDKSISQFQ 145
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 54592366 54593850 - Bma030939 Bma02g01254 78504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01254 145 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 129 - -
Bma02g01254 145 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 87 IPR036638 GO:0046983
Bma02g01254 145 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 23 72 IPR011598 GO:0046983
Bma02g01254 145 CDD bHLH_AtbHLH_like 29 80 IPR045239 -
Bma02g01254 145 SMART finulus 29 78 IPR011598 GO:0046983
Bma02g01254 145 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 1 129 - -
Bma02g01254 145 Gene3D - 20 98 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01254 Bma-Chr2:54592366 Bma04g00857 Bma-Chr4:10845691 3.95E-54 dispersed
Bma02g01254 Bma-Chr2:54592366 Bma13g01005 Bma-Chr13:42313730 3.78E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01254 - - zju:107407179 227.639