Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01288 ATGGAATTCTCCTACGAAGAACTTGCCAGTGCTACGAATTATTTCAATTTGGCTAATAAGATCGGGGAAGGCGGTTTCGGATCCGTGTATTATGCAGAGCTGAGAGGCGAGAAAGCCGCAATCAAGAAGATGGATATGCAGGCGACGAAAGAATTTCTTGCAGAGCTACGAGTTCTAACTCGTGTTCATCATTTGAACTTGGTGCGGCTCATAGGATATTGCGCCGAGGGTTCTCTTTTTCTGGTTTATGAATTCATCGAAAACGGGAACTTAAGCCAGCATTTGCGCGGCTTAGGGAGAGATGTATTGCCTTGGTCTAAAAGGGTTCAAATAGCCCTTGATTCAGCTAGAGGACTTGAATATATTCACGAACACACGGATCGGGTTTATATCCATCGCGATATCAAATCAGCGAATATTTTGATCGACAAGAACTTCCGAGCAAAGGTTGCAGATTTCGGATTGACTAAATTGACGGAAGTTGGCAACACAATCCAGACACAGGTCATGGGCACATTTGGATACATGCCTCCCGAATATGCTCGATACGGCGAAGTTTCTCCAAAAATAGATGTGTACGCATTTGGTGTCGTGCTTTATGAACTTATTTCTGCAAAGGAAGCCGTTATCAAAACAAATCGAGCGAAGGCGGTCAATGAATCCAAGGGCCTAGTGGCATTGTTTGAGGATGTTCTAAACGAGCATGATCCTCGAGAAAATCTTCGAAAACTTGTCGACACGAGGCTGGGAGATAACTATCCGCTCGAATCAGTACTCAAGATGGGTCAGCTTGCTAAAGCCTGTACGAGCGAAAATCCGAAATTACGACCGAGCACGAGATCAATTGTGGTTGCCCTAATGACCCTTTCATCCTCAACTGAGGACTGGGATGTCGGCTCATTCCTTGAAAATCAAGCCCTTGTCAATCTATTGTCTGGAAGGTAG 945 44.87 MEFSYEELASATNYFNLANKIGEGGFGSVYYAELRGEKAAIKKMDMQATKEFLAELRVLTRVHHLNLVRLIGYCAEGSLFLVYEFIENGNLSQHLRGLGRDVLPWSKRVQIALDSARGLEYIHEHTDRVYIHRDIKSANILIDKNFRAKVADFGLTKLTEVGNTIQTQVMGTFGYMPPEYARYGEVSPKIDVYAFGVVLYELISAKEAVIKTNRAKAVNESKGLVALFEDVLNEHDPRENLRKLVDTRLGDNYPLESVLKMGQLAKACTSENPKLRPSTRSIVVALMTLSSSTEDWDVGSFLENQALVNLLSGR 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55092325 55094105 - Bma016125.1 Bma02g01288 78538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01288 314 CDD STKc_IRAK 21 283 - -
Bma02g01288 314 Pfam Protein tyrosine and serine/threonine kinase 16 285 IPR001245 GO:0004672|GO:0006468
Bma02g01288 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bma02g01288 314 SUPERFAMILY Protein kinase-like (PK-like) 3 286 IPR011009 -
Bma02g01288 314 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 314 IPR044812 GO:0019199|GO:0045087
Bma02g01288 314 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
Bma02g01288 314 Gene3D Transferase(Phosphotransferase) domain 1 86 304 - -
Bma02g01288 314 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 1 314 - -
Bma02g01288 314 SMART serkin_6 15 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01288 314 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
Bma02g01288 314 ProSiteProfiles Protein kinase domain profile. 15 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01288 314 PIRSF ILK 2 302 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01288 Bma-Chr2:55092325 Bma12g00080 Bma-Chr12:1468414 6.82E-157 dispersed
Bma02g01288 Bma-Chr2:55092325 Bma15g00184 Bma-Chr15:1925429 8.16E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66375 PF07714 PK_Tyr_Ser-Thr 2.00E-45 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01288 - K13429 csv:101203576 528.865