Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01306 ATGGCTACCTCTGCCGTCCAACAGTCCTCCTTCGCCGGCCAGACTGCCCTCAAGCAGTCCAATGAGCTCCTCCGCAAGGTTGGTGCCTCCGCCTCTAATGGCGGCCGTATCACCATGCGCCGGACTGTGAGGAGTGCTCCTCAAAGCATTTGGTACGGTCCTGATCGTCCGAAGTACTTGGGACCATTCTCCGAGCAAACTCCGTCGTACCTGACCGGCGAGTTCCCCGGAGACTATGGCTGGGACACCGCTGGTTTGTCGGCAGATCCCGAGACGTTCGCTAAGAATCGGGAGCTGGAAGTGATCCACAGCCGGTGGGCCATGCTTGGTGCTCTGGGTTGTGTCTTCCCGGAGATTCTATCGAAGAACGGCGTGCAGTTCGGCGAGGCAGTCTGGTTCAAAGCCGGATCTCAAATCTTCTCCGAGGGTGGCCTGAACTATCTCGGAAACCCGAATCTGATTCACGCTCAGAGCATTCTAGCCATCTGGGCTTCACAGGTTGTCCTAATGGGGTTAATCGAAGGCTACAGAGTCGGCGGAGGGCCTCTCGGCGAAGGGCTCGACCCAATCTACCCAGGTGGATCATTTGATCCCCTCGGTTTGGCCGATGATCCAGAGGCGTTTGCAGAGTTGAAGGTGAAAGAGCTTAAAAACGGAAGACTTGCAATGTTCTCCATGTTTGGATTCTTCGTGCAGGCAATCGTCACCGGAAAAGGTCCGATCGAGAACCTGTCCGACCACCTGGCCGACCCAGTAGCCAATAATGCATGGGCTTACGCCACCAACTTCGTGCCTGGGAAATGA 804 56.34 MATSAVQQSSFAGQTALKQSNELLRKVGASASNGGRITMRRTVRSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILSKNGVQFGEAVWFKAGSQIFSEGGLNYLGNPNLIHAQSILAIWASQVVLMGLIEGYRVGGGPLGEGLDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPVANNAWAYATNFVPGK 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55191335 55192221 + Bma016142.1 Bma02g01306 78556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01306 267 Pfam Chlorophyll A-B binding protein 68 233 IPR022796 -
Bma02g01306 267 Gene3D Chlorophyll a/b binding protein domain 58 260 - -
Bma02g01306 267 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 267 - -
Bma02g01306 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 267 IPR001344 GO:0009765|GO:0016020
Bma02g01306 267 SUPERFAMILY Chlorophyll a-b binding protein 50 264 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01306 Bma12g00859 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01306 Bma-Chr2:55191335 Bma14g00935 Bma-Chr14:10678062 9.67E-154 dispersed
Bma14g00298 Bma-Chr14:3713353 Bma02g01306 Bma-Chr2:55191335 3.53E-127 dispersed
Bma14g00718 Bma-Chr14:7896141 Bma02g01306 Bma-Chr2:55191335 1.34E-39 dispersed
Bma07g01333 Bma-Chr7:48866479 Bma02g01306 Bma-Chr2:55191335 8.43E-90 transposed
Bma12g00859 Bma-Chr12:39396188 Bma02g01306 Bma-Chr2:55191335 0 wgd
Bma12g00859 Bma-Chr12:39396188 Bma02g01306 Bma-Chr2:55191335 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01306 K08913 - zju:107416999 516.153