Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01326 ATGTTTCAGCCAAATATGTTGGAAGCTCAGCTCCATCCATTAGACATGATGCAGAACACATCAGAAAGCGAGCTTGTTCGGCTTAGGGACGACGACTTCGACAGCGCCACTAAATCCGGCAGTGAAAACCATGAGGCTATCTCCGGCGAAGAACAAGTTCCGGGCAAGAAAAGGAAGCGTTACCACCGCCATACCCAACATCAGATCCAAGAAATGGAAGCTTTCTTCAAAGAATGTCCTCACCCAGATGATAAACAGAGAAAAGAACTGAGTAGAGAATTAGGGTTAGAGCCATTACAAATCAAATTTTGGTTCCAAAACAAACGCACTCAAATGAAGAACCAGCATGAGCGCCATGAAAACTCGCAGCTTCGATCAGAAAACGAAAAGCTTGGAGCAGATAACATGAGGTACAGAGAGGCTCTTGGCAATGCCTCCTGTCCTAACTGTGGAGGCCCTACGGCTATTGGAGAGATGTCTTTTGACGAACACCATTTGAGACTTGAAAATGCCCGTCTCCGAGAAGAGATTGATCGAATTTCAGCCATTGCTGCAAAATATGTTGGAAAGCCGGTTTTGAACTACCCTCTTGTACCTTCCTCAGTTCCTCGTTCACTCGAACTTGGCATGGGAAACTTCGGTGGCCCACCGGGTATTGGCGGCGACGTGTTTGGAAGTGCTGGAGACCTTCTACGGTCGATCAGTGCTCCAACGGAGGCTGATAAACCGATAATTATTGAGCTTGCAGTAGCAGCAATGGAGGAATTTATGAGAATGGCTCAGATGGGAGAGCCCTTGTGGCTGACAACTCTTGATGGATCAAACTCTATGCTCAGTGAAGATGAATATATGAGAACATTTCCCAGAGGGATAGGGCCTACACCTTCTGGATTTAAATGTGAAGCTTCTCGTGCAACTGCAGTGGTCATTATGAACCACATTAACCTTGTTGAGATACTAATGGATGTGAATCAATGGTCAACTGTATTCTCTGGAATCATCTCAAGAGCGATGACCCTGGAAGTGCTGTCAACTGGAGTTGCAGGAAATTATAATGGAGCTTTGCAAGTGATGACATCAGAATTTCAAGTCCCTTCTCCACTGGTTCCAACTAGAGAGAGTTATTACGTCAGATACTGTAAACAGCATGGCAATGGAACTTGGGCGGTGGTGGATGTTTCGTTAGACAATTTACGGCCAAGTCCGGCAATGAGATGCCGGCGAAGACCGTCGGGGTGTTGGATCCAAGAAATGCCCAATGGTTATTCTAAGGTAACTTGGATTGAACACGTGGAAGTGGATGATAGAGGTGTCCATAATCTTTACAAGGAGCTAGTGAGCTCCGGTCATGCTTTCGGAGCAAAACGATGGGTTGCGACCCTAGATCGTCAATGTGAACGCCTGGCAAGTGCTATGGCCACCGGAATTCCCACCGGAGATGTTGGAGTAGTGATAACGAATCAAGAAGGAAGAAAGAGTATGTTGAAGTTAGCAGAGAGAATGGTGATAAGCTTTTGCGCTGGAGTGAGTGCTTCGACAACCCACACGTGGACGACACTGTCGGGAACTGGAGCAGATGACGTGAGGGTGATGACTCGTAAGAGCATTGACGATCCTGGTAGACCTGCTGGGATTGTTCTAAGTGCTGCTACCTCCTTTTGGCTTCCAGCTCACCCCAAGAGAGTTTTCGACTTCCTTCGTGACGAAAATTCTCGCAGCCAGCTGGATTTTATTTGTACGCAGTGGGACATTCTTTCGAACGGCGGAATTGTTCAAGAAATGGCTCACATCGCCAACGGCAGGGACACCGGAAACTGTGTATCTTTGCTGCGGGTAAATAGTGCAAATTCAAGCCAGAGCAACATGCTGATTCTACAAGAGAGTTGCACTGATCCGACCGGTTCTTTTGTAATTTATGCTCCGGTCGACATTGTGGCCATGAATGTGGTGTTGAACGGAGGAGATCCAGACTATGTTGCTCTTCTTCCTTCCGGGTTTGCTATTCTTCCTGATGGAACTTCAACTCAAAGTGCCGCCATTGGAGAAGTTTCCTCTGGTGGTTCTCTTCTAACAGTTGCTTTCCAGATCTTGGTCGATTCCGTTCCGACTGCGAAACTCTCTCTCGGGTCAGTTGCCACTGTCAACAATCTCATCGCCTGCACCGTCGAAAGAATCAAAGCTTCGCTATCATGTGAAGATGCATGA 2205 47.17 MFQPNMLEAQLHPLDMMQNTSESELVRLRDDDFDSATKSGSENHEAISGEEQVPGKKRKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQIKFWFQNKRTQMKNQHERHENSQLRSENEKLGADNMRYREALGNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVLNYPLVPSSVPRSLELGMGNFGGPPGIGGDVFGSAGDLLRSISAPTEADKPIIIELAVAAMEEFMRMAQMGEPLWLTTLDGSNSMLSEDEYMRTFPRGIGPTPSGFKCEASRATAVVIMNHINLVEILMDVNQWSTVFSGIISRAMTLEVLSTGVAGNYNGALQVMTSEFQVPSPLVPTRESYYVRYCKQHGNGTWAVVDVSLDNLRPSPAMRCRRRPSGCWIQEMPNGYSKVTWIEHVEVDDRGVHNLYKELVSSGHAFGAKRWVATLDRQCERLASAMATGIPTGDVGVVITNQEGRKSMLKLAERMVISFCAGVSASTTHTWTTLSGTGADDVRVMTRKSIDDPGRPAGIVLSAATSFWLPAHPKRVFDFLRDENSRSQLDFICTQWDILSNGGIVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDPTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSTQSAAIGEVSSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEDA 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55771471 55774736 - Bma016165.1 Bma02g01326 78576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01326 734 SMART HOX_1 56 119 IPR001356 GO:0003677
Bma02g01326 734 Gene3D - 44 131 - -
Bma02g01326 734 SUPERFAMILY Homeodomain-like 47 115 IPR009057 -
Bma02g01326 734 MobiDBLite consensus disorder prediction 33 65 - -
Bma02g01326 734 Gene3D - 277 463 IPR023393 -
Bma02g01326 734 CDD homeodomain 57 116 IPR001356 GO:0003677
Bma02g01326 734 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 14 731 IPR042160 -
Bma02g01326 734 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Bma02g01326 734 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 14 731 - -
Bma02g01326 734 SMART START_1 247 467 IPR002913 GO:0008289
Bma02g01326 734 Pfam Homeodomain 58 114 IPR001356 GO:0003677
Bma02g01326 734 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
Bma02g01326 734 ProSiteProfiles START domain profile. 238 470 IPR002913 GO:0008289
Bma02g01326 734 CDD START_ArGLABRA2_like 242 466 - -
Bma02g01326 734 SUPERFAMILY Bet v1-like 487 726 - -
Bma02g01326 734 SUPERFAMILY Bet v1-like 238 469 - -
Bma02g01326 734 Pfam START domain 248 467 IPR002913 GO:0008289
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01326 Bma12g00798 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01326 Bma-Chr2:55771471 Bma06g01236 Bma-Chr6:49558018 0 dispersed
Bma07g00005 Bma-Chr7:1084866 Bma02g01326 Bma-Chr2:55771471 5.97E-153 dispersed
Bma07g00903 Bma-Chr7:31745117 Bma02g01326 Bma-Chr2:55771471 0 transposed
Bma12g01265 Bma-Chr12:45678632 Bma02g01326 Bma-Chr2:55771471 0 transposed
Bma12g00798 Bma-Chr12:37356095 Bma02g01326 Bma-Chr2:55771471 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56935 PF01852 START 1.50E-58 CL0209 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01326 K09338 - cit:102613029 1262.67