Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01338 TCACCTGATTTGCAACCTCCGGTCGAGGCTCCAGTGCCTTTAGCACCGACCCATTGGATCGATGATGATATGGCTCCACCTCCTAAACGTCACCCGCCTCTTCCTCAAGCCACTCCACCTTCAAGGAAGCAAGAAGCTAAGAATATGGCTAAAATTGCTGCAACTACAGGAGGAGCTGTGATTGTCATGTCGCTTATCTTATGTTTCTGCATCAAAAATAATGCAAATCAGCTTGATGATAGTGGTAAAAAAGATGATAGGCCACTTTTAATTTTATCTACGAGATCTTCCCAGAATTCTTTTGGCTTAGCAAATTCAAGTATTAGAGAATTCAGTGGAAAGAATCCAGCTTTTGCTTCGAGTTTATCGATAAAGCCTGAAACTAACACCTCCATGGCCGAGGCTCAATCATCTGATGCAATTCCAGCAGTGCCATTTCCTCCATTAAAATTGCCTCCCGGAAGATCAGCTTCTCAGCCTCCTGTCCCACCTGCTCCTTCTCCACCACCACCGCCTCCGAAAGTTGTTTGTCCTCCGCCTCTTCCACCAAAGACAATGCCTGGAAGAACAAAACTGCCATCATCGGTGCCTCGTAGTCGTAGAACTAGCGCTTCAAGTGAAGGCAAAAATGATGATGATGATGATTCTGTGTCACAAAAGGCCAAGTTGAAGCCATTTTTCTGGGATAAGGTCCTTACCAATCCTGATCAATCAATGGTCTGGCACGATATTAGCTCCGGCTCGTTTCAGTTCAGCGAAGAGATGATCGAGTCTTTATTTAGTTATGCCAATGTAAATAACAACAAGACTGACCGCAGGAAAGACTCTTCCTCCCTCGATCCGTCAATCCAATACATTCAGATCATAGATCCTAAAAAGGCACAAAATCTATCCATTCTTCTACGAGCTTTAAATGTTACTACAGAAGATGTTGTCGACGCCATGAAAGAAGCACCACCTGCTATTGCATCAGGAAATGAACTTCCGGCGGAACTTCTCCAAACATTGTTGAAGATGGCACCGACGACCGAAGAGGAATTGAAGCTAAGACTATTCACCGGAGATCTTTCTCAACTTGGCCCTGCAGAAAGATTCCTCAAAGTACTGGTAGACATCCCATTTGCTTTCAAAAGAATAGATTCACTTCTCTTCAGGTGCTCCCTGCAGGAGGAGATCTCTGGCATTAAAGAGTCCTTTGCAACTCTAGAGGTTGCTTGCAAGAAACTCAGAAACAGCAGACTATTCTTAAAGCTCTTGGAAGCTGTTCTTAAAACTGGTAATAGGATGAACGATGGCACCTACCGTGGAAGTGCACAGGCGTTTAAACTCGACACGCTCTTGAAACTGGCTGACGTTAAAGGAGCAGATGGGAAAACTACACTTTTGCACTTTGTTGTTCAGGAGATTATAAGATCTGAGGGTGTTCGAGCTGTAAGAACAGCGAAAGAAAGCCAGAGCATTTCAAGCATAAATTCAAGGGAGTACCCTGAATATCTGGTGGACGAATCTGCAGACCATTATCGACAACTTGGCCTGCAGGTCGTTTCTGGATTAAGCGCCGAACTTGAAGATGTCAAAAAGGCTTCAGTAATAGACCCCGACAGCCTCAAGACCACGGTCTCGAGACTCTGCAATTCGCGCATTAAAATAAGAGAGTTCTTAGAAAATGAGATGCAAAACCTTGATGAAAAAAGTGAATTCCATCACTCACTGACTAGTTTTGTAGCGCAGAAGGAACCAGACATCACGGAGATCTTAGAGGAAGAAAAGAGAATCAGGGCTCTGGTAAAGAGCACGGGGGATTACTTCCATGGAAATTCTGGAAAGGACGAAGGTTTGAGATTATTCGCGATAGTACGTGATTTTCTGTTCATGCTCGACAAGTCTTGTAAAGAAGTTAGAGATGGTGCAACAACATTAACGACGATAAAGAGAGACAAGAAAGCGAATCGATCGGAGACAGCTTCAGTCGGAAACCGACAACTTTCCGATATTATTCACAGACGACTATTTCCAGTCATCGCCGGACGGAGAATGGACGAGTCCAGTTCAGACGATGAGAGCTCATCTCCGTAG 2076 44.46 SPDLQPPVEAPVPLAPTHWIDDDMAPPPKRHPPLPQATPPSRKQEAKNMAKIAATTGGAVIVMSLILCFCIKNNANQLDDSGKKDDRPLLILSTRSSQNSFGLANSSIREFSGKNPAFASSLSIKPETNTSMAEAQSSDAIPAVPFPPLKLPPGRSASQPPVPPAPSPPPPPPKVVCPPPLPPKTMPGRTKLPSSVPRSRRTSASSEGKNDDDDDSVSQKAKLKPFFWDKVLTNPDQSMVWHDISSGSFQFSEEMIESLFSYANVNNNKTDRRKDSSSLDPSIQYIQIIDPKKAQNLSILLRALNVTTEDVVDAMKEAPPAIASGNELPAELLQTLLKMAPTTEEELKLRLFTGDLSQLGPAERFLKVLVDIPFAFKRIDSLLFRCSLQEEISGIKESFATLEVACKKLRNSRLFLKLLEAVLKTGNRMNDGTYRGSAQAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRSEGVRAVRTAKESQSISSINSREYPEYLVDESADHYRQLGLQVVSGLSAELEDVKKASVIDPDSLKTTVSRLCNSRIKIREFLENEMQNLDEKSEFHHSLTSFVAQKEPDITEILEEEKRIRALVKSTGDYFHGNSGKDEGLRLFAIVRDFLFMLDKSCKEVRDGATTLTTIKRDKKANRSETASVGNRQLSDIIHRRLFPVIAGRRMDESSSDDESSSP 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55864214 55866649 + Bma016179.1 Bma02g01338 78588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01338 691 ProSiteProfiles Formin homology-2 (FH2) domain profile. 213 653 IPR015425 -
Bma02g01338 691 MobiDBLite consensus disorder prediction 129 218 - -
Bma02g01338 691 MobiDBLite consensus disorder prediction 204 218 - -
Bma02g01338 691 PANTHER FORMIN-LIKE PROTEIN 3 32 688 - -
Bma02g01338 691 PANTHER FORMIN-RELATED 32 688 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bma02g01338 691 MobiDBLite consensus disorder prediction 1 48 - -
Bma02g01338 691 SUPERFAMILY Formin homology 2 domain (FH2 domain) 168 635 - -
Bma02g01338 691 Pfam Formin Homology 2 Domain 217 626 IPR015425 -
Bma02g01338 691 Gene3D Formin, FH2 domain 219 661 IPR042201 -
Bma02g01338 691 SMART it6_source 213 641 IPR015425 -
Bma02g01338 691 MobiDBLite consensus disorder prediction 145 187 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01338 Bma12g00784 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01338 Bma-Chr2:55864214 Bma14g00359 Bma-Chr14:4370430 0 dispersed
Bma14g01752 Bma-Chr14:37740998 Bma02g01338 Bma-Chr2:55864214 4.15E-83 dispersed
Bma12g00784 Bma-Chr12:35983666 Bma02g01338 Bma-Chr2:55864214 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01338 - - qlo:115955285 708.753