Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01346 ATGGAGTTCGATCTCGAAAACCCATTAAAATATTTTCACGACCTTCAATCTGATACCCTTGCCTCTCTCTTTCTCCTCGAATCTGATCACATGCCATCAGAATCTTACGTTCAGTCTCTTCAATCTTCTGATTCTGATTTCTCTATCAGACGAGAAGCCATTTCTTTAATTTCCCAGAGCTGCTGCAACTATGATCCTCTGTTGGCATATCTCGCAATCACTTATCTCGATCGGTTCTTGTCCAACCAAGGAATACCAGAATCAAAACCATGGGTTTTAAGACTTCTTGCAGTCTCTTGTGTTTCATTAGCTGCGAAGATGAAGAAATCTAAATTCTCCCTCGCTGATTTCCAGGGCTATGGAGGTTTAATATTCGACAAACGAACAATAAAGAGAATGGAAGTTCTGATATTGGGAGCTTTAAAATGGCGAATGCGCTCTATCACTCCCTTTTCTTTCATTCCATTTTTCTTCTCTCTTTTCGAACAAAAGCATCCGTCATTGACCCAGGCGCTCAAAGCTCGAGCTACTGAAATCATCTTCAGCGCTCAAACTGGTAAAACCCCGTTAAAACTAAAGAGCTTCCATCACGAAAGAACATCATTACTTTTTCTTTTTGCAGAGATTAAGCTCTTGGAGTTCAAACCATCCGCCATTGCTGCATGTGCTTTGCTTTCAGCTTCTCACGAACTATTCCCATTACAATATCCATCCTTCAGAACATCAATTTCTAGTTGTTCATACGTACATAAAGACGACTTGTTTCGATGTTTTAATGCAATGCAAGTTGTAGTGATAAACGGGTACGAGTCAGTTTTGGAAATCGGTCGGAGCTCCGATACACCGGTGAATGTCTTAGACGGCCATTTTACAAGCTCGGAGAGTGAAAGTCTGAGTGAAACAGGCACAGAGAGAATCAATCCAAGAGCAGAGAGAGATGCCTAG 945 41.38 MEFDLENPLKYFHDLQSDTLASLFLLESDHMPSESYVQSLQSSDSDFSIRREAISLISQSCCNYDPLLAYLAITYLDRFLSNQGIPESKPWVLRLLAVSCVSLAAKMKKSKFSLADFQGYGGLIFDKRTIKRMEVLILGALKWRMRSITPFSFIPFFFSLFEQKHPSLTQALKARATEIIFSAQTGKTPLKLKSFHHERTSLLFLFAEIKLLEFKPSAIAACALLSASHELFPLQYPSFRTSISSCSYVHKDDLFRCFNAMQVVVINGYESVLEIGRSSDTPVNVLDGHFTSSESESLSETGTERINPRAERDA 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55928442 55929837 - Bma016190.1 Bma02g01346 78596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01346 314 Gene3D - 21 260 - -
Bma02g01346 314 PANTHER CYCLIN-D6-1-RELATED 5 194 - -
Bma02g01346 314 MobiDBLite consensus disorder prediction 292 314 - -
Bma02g01346 314 PANTHER CYCLINS 207 299 IPR039361 -
Bma02g01346 314 SUPERFAMILY Cyclin-like 9 145 IPR036915 -
Bma02g01346 314 SMART cyclin_7 55 139 IPR013763 -
Bma02g01346 314 Gene3D - 33 146 - -
Bma02g01346 314 PANTHER CYCLIN-D6-1-RELATED 207 299 - -
Bma02g01346 314 PANTHER CYCLINS 5 194 IPR039361 -
Bma02g01346 314 Pfam Cyclin, N-terminal domain 23 145 IPR006671 -
Bma02g01346 314 SUPERFAMILY Cyclin-like 130 263 IPR036915 -
Bma02g01346 314 CDD CYCLIN 50 138 IPR013763 -
Bma02g01346 314 Pfam Cyclin, C-terminal domain 149 267 IPR004367 -
Bma02g01346 314 SMART Cyclin_C_2 148 298 IPR004367 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01346 Bma03g00713 CCT
Bma02g01346 Bma12g00767 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01346 Bma-Chr2:55928442 Bma11g00364 Bma-Chr11:3907335 1.72E-66 dispersed
Bma12g00767 Bma-Chr12:34808349 Bma02g01346 Bma-Chr2:55928442 1.75E-158 wgd
Bma02g01346 Bma-Chr2:55928442 Bma03g00713 Bma-Chr3:6361865 2.00E-85 wgd
Bma02g01346 Bma-Chr2:55928442 Bma08g00601 Bma-Chr8:37983916 2.40E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01346 K18812 - qsu:111984715 354.755