Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01353 ATGAGAGGCTCTTCCTTTTACCAGACAGCCTCCAATCTCTTCCGTAATCACCCTTCCATCTCCAAGCTTCTTGTCGTTGTCACTCTCAGTGGCGGAGGAATAGCAGCGGCGACTGCTGTCAATAACAGCAGAGTATTTCCGGCTGCATATGCAGAATCCGGCGAAGAAAGCTTCAGGAAGAAGAAGGTGGTGGTGATTGGAACAGGATGGGCGGGAACCAGTTTCTTAAAAAACTTGAAAAGCTCTTCCTATGACGTCCATGTTATCTCCCCTCATAACTACTTTGCATTCACGCCCTTATTACCCAGCGTCACTTGCGGCACCGTCGAAGCTCGAAGCATCGTCGAACCGATTCGAAGCATCACTCGGAAGCAAGGTTTGGATATTCAATTCAGAGAAGCTACGTGTTATAAGATCGACAACGGCGGGAAGAAAGTGTATTGTCGATCTAGTCAAGATACGAATTTGGGTGGAAAAGAAGAGTTTTCGATAGACTATGATTACTTGATAATAGCAATGGGAGCTAGATCAAACACTTTCAACACACCTGGAGTGGAGGAACACACCCATTTCTTGAAGGATGTAGAAGATGCTCAGAGGATTCGTCAGAACGTGATAGACTGTTTCGAGAAGGCGAATCTTCCTAATTTGAGCGAAGAAGAGAAGAAGAGAACTCTGCATTTTGTAGTCGTCGGAGGTGGTCCGACCGGAGTTGAATTTGCAGCAGAGCTTTATGATTTTGTAAAGGAAGACTTATCCAAGCTTTATCCATCAGTGAAAGACTACGTCAAAATCACCCTCCTCGAGGCCGGAGATCATATATTAAACATGTTTGACAAGAGAATTACAGCTTTTGCTGAAGAAAAATTCCAGAGAGATGGGATTAATGTGAAGACAGGGTCCATGGTGGTGAAGGTTTCTGATAAAGAAATCATCACCAAAGAGAGAGCTACCGGCGAATCTAAATCTCTGCCTTATGGAATGGTCGTCTGGTCTACCGGCATTGGCCCTCGCCCTGAAGTAGTCGATTTCATGAAGCAGATCGGCCAGACGAGCAGGCGAGCTTTAGCGACGGACGAATGGCTGAGAGTCGAAGGCTGCGACAGCGTGTATGCTTTAGGCGACTGTGCCACCATAAACCAGCGCAGAGTCATGGAAGATATAGCGATTATATTCAACAAAGCAGATAAGAACAACTCTGGGACTTTGAATCTGAAAGACTTTCAGGAAGTGGTTGATGATATCTGTGAGAGATACCCACAGGTGGAGCTTTACTTGAAGAAGAAACAAATGAAAAATTTTGCTGCTTTGCTCCAGAAATCTCAAGCAGAGGCGCAGAAACAACACCCAGAATTGAATATTGAAGTGTTCAAATCAGCTCTTTCTGAAGTGGATTCTCAGATGAAGAACCTTCCGGCCACTGCTCAGGTAGCTGCTCAACAAGGTGAGTATCTTGCAAGCTGCTTCAATCGCATGGAGGAATGTGAGAAATACCCAGAAGGTCCTCTCAGATTCAGAGGAACAGGGCGTCACCGGTTTCATCCTTTCAGGTACAGGCATTTCGGGCAATTTGCTCCGCTCGGAGGAGAGCAAACTGCGGCGCAACTTCCCGGAGACTGGGTTTCGATCGGTCACAGTACCCAGTGGCTCTGGTACTCTGTTTATGCAAGCAAGCTAGTCAGCTGGCGCACAAGAGTGTTGGTGGTGTCGGATTGGGGAAGAAGATTCATTTTCGGAAGGGATTCGAGCCGTATCTGA 1758 46.59 MRGSSFYQTASNLFRNHPSISKLLVVVTLSGGGIAAATAVNNSRVFPAAYAESGEESFRKKKVVVIGTGWAGTSFLKNLKSSSYDVHVISPHNYFAFTPLLPSVTCGTVEARSIVEPIRSITRKQGLDIQFREATCYKIDNGGKKVYCRSSQDTNLGGKEEFSIDYDYLIIAMGARSNTFNTPGVEEHTHFLKDVEDAQRIRQNVIDCFEKANLPNLSEEEKKRTLHFVVVGGGPTGVEFAAELYDFVKEDLSKLYPSVKDYVKITLLEAGDHILNMFDKRITAFAEEKFQRDGINVKTGSMVVKVSDKEIITKERATGESKSLPYGMVVWSTGIGPRPEVVDFMKQIGQTSRRALATDEWLRVEGCDSVYALGDCATINQRRVMEDIAIIFNKADKNNSGTLNLKDFQEVVDDICERYPQVELYLKKKQMKNFAALLQKSQAEAQKQHPELNIEVFKSALSEVDSQMKNLPATAQVAAQQGEYLASCFNRMEECEKYPEGPLRFRGTGRHRFHPFRYRHFGQFAPLGGEQTAAQLPGDWVSIGHSTQWLWYSVYASKLVSWRTRVLVVSDWGRRFIFGRDSSRI 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55967614 55970215 - Bma016197.1 Bma02g01353 78603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01353 585 Pfam Pyridine nucleotide-disulphide oxidoreductase 61 385 IPR023753 GO:0016491
Bma02g01353 585 ProSiteProfiles EF-hand calcium-binding domain profile. 383 418 IPR002048 GO:0005509
Bma02g01353 585 SUPERFAMILY FAD/NAD(P)-binding domain 227 380 IPR036188 -
Bma02g01353 585 PANTHER NADH DEHYDROGENASE 2 585 IPR045024 GO:0003954|GO:0006116
Bma02g01353 585 Gene3D - 459 575 - -
Bma02g01353 585 Gene3D - 53 445 - -
Bma02g01353 585 SUPERFAMILY EF-hand 384 465 IPR011992 -
Bma02g01353 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 166 184 - -
Bma02g01353 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 227 245 - -
Bma02g01353 585 PRINTS FAD-dependent pyridine nucleotide reductase signature 63 82 - -
Bma02g01353 585 ProSitePatterns EF-hand calcium-binding domain. 396 408 IPR018247 -
Bma02g01353 585 PANTHER - 2 585 - -
Bma02g01353 585 SUPERFAMILY FAD/NAD(P)-binding domain 60 279 IPR036188 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01353 Bma12g00781 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01353 Bma-Chr2:55967614 Bma07g00356 Bma-Chr7:4477954 6.60E-14 dispersed
Bma02g01353 Bma-Chr2:55967614 Bma01g00537 Bma-Chr1:4610185 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01353 K03885 - csv:101209855 990.719