Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01363 ATGGGGTGGAGGAAGTCTGCAACTGCGTGTAAGAATTTGAAGATCTGTGCTCAGGTTTTGGGGTTCGTGTTGATCTGTGTGCCGCAATTTTCTCATGGGTTAACTAATCCCAATGACCTAGCTGCAATTAGCCAGTTACATGCCGCCCTTGGCTACCCTGTTCTTCCTGGGTGGGGCGTTGGACAAGATCCCTGCGGTGATGCCTGGCAGGGTGTTGTGTGCACCATTTCAGTACATATTCTTAACGCTGCTAATCTGGGAGGAGAATTGGGTGACAACTTGGCACAGTTTTCTTCTATAACAGCAATAGATCTAAGTAACAATCAAATTGGAGGAAGTATACCATCCAACTTACCTGCAACATTACAGAACTTTTTTCTTTCAGCTAATCAATTTACTGGAAGCATCCCAAGTTCTTTCTCCTCTTTGACTCAATTGACTGCTTTGTCGTTAAATGAAAATTACCTGAGTGGGGAGATTCCCGATTCTTTCGAAAACCTTCCTGGACTGGTTAATCTGGACTTATCCAACAACAATTTGAGTGGGGCTCTACCTCCCTCTATGGAAAATTTGTTGGCACTAACTACCCTGCGATTGCAAACCAATCAGCTGTCTGGTACACTTGATGTTTTGCAAAATCTGCCACTCAGAGATTTGAATATAGAGAACAATCTTTTTTCTGGCCCCATACCTGTGAAGCTACTGAACATCCCAAGTTTCAGAAATGATGGAAATCCATTCAATTCATCTGTTTCTCCAGTACTTCCTCCTTCACCCCCGTCAAAACAATCACCAGTGCCTTTCTTTTCTGGAGAACCATCTTCGGAGGAATCACCAGAAAAGCCGGCTGACAGACCATCGTCGCCAAATGAATCAAAATCAGGAACTTTTTTAACTACCAAAAAGGTCGTTTGGCTATCAATTGCTGCGCGGCATGAAATTGTTCCAAAAGATGCTGTTGGGAAGCCAAAGGAAGGTTATCAATCAGAGACTCAGAGAATAGGAGTGATACCAGAACTGAAGACTCCAAAGCAGGATGATCATGAGAGAGATACTAGTGCTCTGGATGACTATTTAATTCCTCCCCCTCCCCCATCATTTCCACTGCTTGCTGTGAAGAAACTAGATAAGAGAAGTTGTAGTCAACAAAAGGATGATGACTTTCTTGAAATGGTGAATAATATCGATACGATACGCCATCATAATATTGTGAAGCTCATAGGTTACTGTGCAGAACATGATCAAAGACTGCTTATCTTTGAGTACTGTAATAATGGTACCCTGCAAGATGCATTGCACTCCGACAATGAAACTAAAAAAAATCTTTCTTGGAACATCCGCGTACAGATGGCTCTTGGAGCTGCTAGAGCCTTGGAGTATCTGCACGGGGTCTGTCAGCCTCCGGTTATGCATAGAAATTTTAAGTCTGCCAATATTCTCCTCGATCATGACTATGCCATCCGTGTCTCTGATTGTGGTTTATCTCCACTTATATCATCAGGCTCTGTCAGTCAGTTGTCTGGCCATCTGCAATCTGTGTATGGATGGGGAGCTCCAGAATACGAGTTGGGAACTTACACTTTGAAGAGCGACGTTTACAGCTTTGGCGTGGTAATGTTAGAACTTTTGACAGGCCGGATGTCGTATGACAGAACGAGGATCCGAGGAGAACAATTTCTGGTCCGATGGGCGATTCCGCAGCTTCACGACATCGATGCATTGTCAAGAATGGTCGACCCTTCTCTCGGTCTTCATTACCCACCAAAATCCTTATCGCACTTCGCAGACATCATATCTCGTTGCGTTCAGCCTGAGCCAGAATTCAGGCCAGCAATGTCTGAAGTCGTACAGGATCTGGTAGACATGATAAGAAGAGAGCCTCATGGGATTTTAGCATCTTCGCTTAGCTCCCATGAGTCGCTACGATTCCAATCCTTTCGACGAAGAGGTCAATCCATTCTCGGTGAGTGCCATTTTCGTCACTTGCTTTCTGTGCTCGTGCGTGGAAATTCCGCCAATTCTGATCGTGGTACTGTTCCACCTGCAAACTCTAGGCCCTCACCCCTTGCTCCAGAACCATATGACCGTGGAGTGACAATTGATATTCCCCTCGATAATTCAAAGGATTATAAAGTAAAGGAGAGGGAGCTCCAAGCTAAAGAGGCCGAATTGAAAAGGAGGGAACAGCTGTTTCTAAATTATTTCTTCTCTTCTTGCTCAGCTGGAATTGTAATAGAAGAGAAAAATTGGCCTCCATTTTTCCCTATTATCCATCATGATATTGCCAATGAGATACCAATCCATCTACAAAGAGTACAATATGTTGCTTTTACAACATTTTTGGGTTTGGTTGCTTGTCTCACATGGAACATTGTTGCTGTTACAACAGCATGGATAAAAGGCGAAGGTCCAACAATATGGTTTCTTGCAATTATCTATTTTATATCTGGTGTTCCCGGAGCCTATGTTGGTTGGTATCGCCCTCTATATCGTGCCACGAGGACAGATAGTGCCTTGAAATTTGGATGGTTTTTCCTGGCGTATATGATTCATATTGTATTTTGTGTCTTTGCTGCTGTTGCCCCTCCTGTTGTTTTCAAGGGGAAATCACTCACAGGTATCTTACCTGCAATCGACTTGCTGGGCAGTCATGCTTTAGTTGGGATATTCTACATGGTTGGTTTTGGATTGTTCTGCCTCGAATCAGTGCTCAGCATCTGGGTTATTCAGCAAGTTTACATGTATTTCCGAGGCAGTGGCAAAGCGGCAGAGATGAAGCGCGAAGCTGCTCGGGGCACCATGATGAATGCTCTAGGATAA 2820 44.04 MGWRKSATACKNLKICAQVLGFVLICVPQFSHGLTNPNDLAAISQLHAALGYPVLPGWGVGQDPCGDAWQGVVCTISVHILNAANLGGELGDNLAQFSSITAIDLSNNQIGGSIPSNLPATLQNFFLSANQFTGSIPSSFSSLTQLTALSLNENYLSGEIPDSFENLPGLVNLDLSNNNLSGALPPSMENLLALTTLRLQTNQLSGTLDVLQNLPLRDLNIENNLFSGPIPVKLLNIPSFRNDGNPFNSSVSPVLPPSPPSKQSPVPFFSGEPSSEESPEKPADRPSSPNESKSGTFLTTKKVVWLSIAARHEIVPKDAVGKPKEGYQSETQRIGVIPELKTPKQDDHERDTSALDDYLIPPPPPSFPLLAVKKLDKRSCSQQKDDDFLEMVNNIDTIRHHNIVKLIGYCAEHDQRLLIFEYCNNGTLQDALHSDNETKKNLSWNIRVQMALGAARALEYLHGVCQPPVMHRNFKSANILLDHDYAIRVSDCGLSPLISSGSVSQLSGHLQSVYGWGAPEYELGTYTLKSDVYSFGVVMLELLTGRMSYDRTRIRGEQFLVRWAIPQLHDIDALSRMVDPSLGLHYPPKSLSHFADIISRCVQPEPEFRPAMSEVVQDLVDMIRREPHGILASSLSSHESLRFQSFRRRGQSILGECHFRHLLSVLVRGNSANSDRGTVPPANSRPSPLAPEPYDRGVTIDIPLDNSKDYKVKERELQAKEAELKRREQLFLNYFFSSCSAGIVIEEKNWPPFFPIIHHDIANEIPIHLQRVQYVAFTTFLGLVACLTWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVGWYRPLYRATRTDSALKFGWFFLAYMIHIVFCVFAAVAPPVVFKGKSLTGILPAIDLLGSHALVGIFYMVGFGLFCLESVLSIWVIQQVYMYFRGSGKAAEMKREAARGTMMNALG 939
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 56003294 56011987 - Bma016206.1 Bma02g01363 78613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01363 939 PANTHER LEUCINE RICH REPEAT KINASE 2 21 310 - -
Bma02g01363 939 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 369 626 - -
Bma02g01363 939 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 21 310 - -
Bma02g01363 939 MobiDBLite consensus disorder prediction 248 295 - -
Bma02g01363 939 Gene3D Phosphorylase Kinase; domain 1 367 423 - -
Bma02g01363 939 Gene3D Ribonuclease Inhibitor 29 254 IPR032675 -
Bma02g01363 939 Coils Coil 707 730 - -
Bma02g01363 939 SUPERFAMILY L domain-like 55 239 - -
Bma02g01363 939 PANTHER LEUCINE RICH REPEAT KINASE 2 369 626 - -
Bma02g01363 939 MobiDBLite consensus disorder prediction 671 696 - -
Bma02g01363 939 ProSiteProfiles Protein kinase domain profile. 314 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01363 939 Gene3D Transferase(Phosphotransferase) domain 1 424 627 - -
Bma02g01363 939 MobiDBLite consensus disorder prediction 252 266 - -
Bma02g01363 939 Pfam SCAMP family 747 918 IPR007273 GO:0015031|GO:0016021
Bma02g01363 939 SUPERFAMILY Protein kinase-like (PK-like) 370 619 IPR011009 -
Bma02g01363 939 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Bma02g01363 939 Pfam Protein tyrosine and serine/threonine kinase 371 619 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01363 Bma12g00749 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01363 Bma-Chr2:56003294 Bma11g00380 Bma-Chr11:4117952 9.17E-139 dispersed
Bma08g00889 Bma-Chr8:47538504 Bma02g01363 Bma-Chr2:56003294 9.81E-34 dispersed
Bma12g00749 Bma-Chr12:34452225 Bma02g01363 Bma-Chr2:56003294 4.43E-145 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66376 PF07714 PK_Tyr_Ser-Thr 2.00E-41 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01363 - K19995 gmx:100814012 719.153