Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01365 ATGGGGGGTTGTATATCCACGAGTAGCCGTAGTAGTTGCAGTAGCACAAGCAGTGGGGGGAAAGTTTCTTCTTCCTGCTTTGGTTTAGTGGTTTATGATCAAAAGAGAACATTCTCCGATCATGTCGTTTCTCTTTACCGCTCAACTTCGATGTCGAGCCGAATTGTCAACAATGGAAAAACTCCGACTTCTTGCATTTTCACGCAGCAGGGTCGCAAGGGAATTAACCAGGATGCCATGATTGTGTGGGAAGATTTCATGACTGGAGATGTAACATTTTGTGGCGTATTCGATGGTCACGGTCCTCATGGTCATCTCGTATCTCGCAAAGTAAGAGATGCTTTACCCAAAAAGCTTCTCTCATTCTTGCTTTCTTCCCAATCGAATCAAAAAGGGTCTGGTCGAAGCTGTTTCAGCTGGAATGCGAAGAAAGAAGAAGACCAAGATATGGAGAAGGATGCCTCTGCAGAAGATAAATTAAATTCTGTAATGAGGGAAGCTTTCCTCAAGACATACAAATCCATGGATAAGGAGCTCAGATCGCATCCAAATCTTGACTGTTTCTGTAGTGGTAGTACTGCAGTGACTATAATCAAACAGGGCTCGAATCTGTTCATAGGCAATATTGGGGATTCTCGAGCAATTCTTGGATCAAAGGGAAGTGACGATTCCATGGTAGCAATTCAGCTGACTGTTGATCTAAAGCCTGATTTGCCCAGAGAGGCTGAAAGAATAAAACAATGCAATGGTAGAGTTTTTGCGTTGCAGGATGAGCCGGAAGTGCCAAGAGTGTGGCTGCCATTCGACGATGCACCTGGGCTAGCCATGGCTCGTGCATTCGGCGATTTTTGTTTGAAGGAATATGGTGTGATCTCTATACCAGAATTCTGCCACCGAAAACTCACAAACAAAGATCAGTTCATCGTTCTCGCCTCAGATGGGGTATGGGATGTGTTGAGTAACGAGGAGGTGGTGCAGATTGTATCAACTGCTCCTACAAGGTCATCGGCTGCAAGAACCCTGGTCGACAAAGCTGCCCATGAATGGAATCTCAAATACCCAACTTCAAAGATGGATGATTGTGCTGTGGTCTGCCTGTTTCTCGACGGAAAGCTGGACTCTGAATCTGATTATGATGAACAAGGTTCGTCCACAATCCTTCAAAGAGATCATTCTGGCAATGCCACTATTGAATCAGATGGTACTCAGAAAAGTGAGCCGACTTTTCAACGAAACCAAACTGTCCGATCATCAGAAGATGACGAAACCTATGAAAAACTGCCAGTTGATGTTGAAGAACCGGCTGCAGCTGAAGAACAGAATTGGTCAGGTTTGGAAGGTGTGACAAGAGTGAACTCACTAGTTCAACTTCCAAGATTTTCTCAAGAAAGGCCCAAGCCTTGA 1404 44.8 MGGCISTSSRSSCSSTSSGGKVSSSCFGLVVYDQKRTFSDHVVSLYRSTSMSSRIVNNGKTPTSCIFTQQGRKGINQDAMIVWEDFMTGDVTFCGVFDGHGPHGHLVSRKVRDALPKKLLSFLLSSQSNQKGSGRSCFSWNAKKEEDQDMEKDASAEDKLNSVMREAFLKTYKSMDKELRSHPNLDCFCSGSTAVTIIKQGSNLFIGNIGDSRAILGSKGSDDSMVAIQLTVDLKPDLPREAERIKQCNGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFCHRKLTNKDQFIVLASDGVWDVLSNEEVVQIVSTAPTRSSAARTLVDKAAHEWNLKYPTSKMDDCAVVCLFLDGKLDSESDYDEQGSSTILQRDHSGNATIESDGTQKSEPTFQRNQTVRSSEDDETYEKLPVDVEEPAAAEEQNWSGLEGVTRVNSLVQLPRFSQERPKP 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 56054974 56056677 - Bma016208.4 Bma02g01365 78615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01365 467 ProSiteProfiles PPM-type phosphatase domain profile. 63 368 IPR001932 -
Bma02g01365 467 Pfam Protein phosphatase 2C 133 345 IPR001932 -
Bma02g01365 467 MobiDBLite consensus disorder prediction 415 433 - -
Bma02g01365 467 CDD PP2Cc 69 368 IPR001932 -
Bma02g01365 467 MobiDBLite consensus disorder prediction 379 414 - -
Bma02g01365 467 PANTHER ALPHABET, ISOFORM E-RELATED 1 455 - -
Bma02g01365 467 SUPERFAMILY PP2C-like 62 370 IPR036457 -
Bma02g01365 467 SMART PP2C_4 53 366 IPR001932 -
Bma02g01365 467 MobiDBLite consensus disorder prediction 1 23 - -
Bma02g01365 467 MobiDBLite consensus disorder prediction 375 445 - -
Bma02g01365 467 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 455 - -
Bma02g01365 467 Gene3D - 47 370 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01365 Bma08g00589 CCT
Bma02g01365 Bma12g00748 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01365 Bma-Chr2:56054974 Bma13g00370 Bma-Chr13:6866969 5.71E-150 dispersed
Bma12g00748 Bma-Chr12:34361091 Bma02g01365 Bma-Chr2:56054974 0 wgd
Bma02g01365 Bma-Chr2:56054974 Bma08g00589 Bma-Chr8:36747947 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01365 - - zju:107416642 693.73