Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma02g01380 | ATGGTAAAATCTGCCATTTCTGATTATCCCGGAAAAGGAAGACTACCCAGGGCTGCAGAAGGAGAGCAAGTTGCAGCCGGGTGGCCGAGTTGGCTCTCGTCCGTGGCCAGTGAAGCGATAAAGGGTTGGATTCCTCGTCGGGCCGATACTTTCGAAAAGCTCGAAAAAATCGGGCAAGGAACGTATAGCAGCGTGTACAAGGCTCGAGACATAATTCACAATAGATTAGTAGCTTTGAAGAGAATAAGATTCGATAATCTCGATATAGAAAGTGTCAAGTTTATGGCAAGGGAAATCCTTATTTTGCGTCGGCTAGACCATCCAAACGTCATAAAACTAGAAGGTTTGATTACTACCCCAAGATCTTGCAGCTTGTACCTCGTTTTCGAGTATATGGAACACGACCTTACGGGGCTGGCATCTCGTCCAGGTCTCAAATTCACCGAACCGCAGATTAAATGTTATATGCAACAACTTCTTCGGGGACTCGATTACTGTCACAAAAATGGTGTTTTGCATCGCGATATAAAGGGCTCGAATCTTCTGATCGATGACAATGGTATCTTGAAAATCGCAGATTTTGGTTTAGCGAGTTTTTACGACGCCAATAATAGTGTTCCTTTGACAAGTCGGGTAGTGACGCTTTGGTATAGACCACCCGAGCTTTTGCTCGGAGTTTCCCACTATGGAGTTGAAGTCGATTTATGGAGTGTTGGTTGTATACTCGCAGAGTTATACTTCGGAAATCCGTTTTTACCCGGAAAGACTGAGGTTGAACAACTACATAAGATATTCAAGCTTTGCGGGTCGCCATCCGATGATTATTGGAGAAAATTGCAGCTACCTCATGCAGCCGTTTTCAAGCCTGCACATCCGTACCGACGATGTGTTGCTGAATTGCTCAAGGAATATCCCCCAGCAGCCGTGGCTCTTATCGATGCTTTGCTTTCTATTGAACCTTCGAGGCGAGGAACTGCAGCTACGGCTTTGAAGAGTCAGTTCTTCGCAACTAAACCATTCGCCTGTGATCCATCGAGTTTGCCTAAATATCCTCCGAGCAAAGAGATTGACACGAAAATACGGGATGCAGCCAGAAGACAGGAGAAGGACGGGGGCAAAGGTCGCGATAGGGATGGCGATGGCAGACAAGCTAGAGATTCAAAGGATTGTCTTGATCCTAATGTAAAAGTAGAATTTGGAGCACCGTTTTTGAGACGACAAGGCCATTCGAGCTCTGTGAGCAGAAGTGACCTCTTCAATCCTAGAAGTGAGCAGCCAATTTCGGGTTTTCTTGTAGCTCCACCTAAACAAACTAGGCCGGAAAAAGAAGAAAGCCGGGAGTCGAACTCACACATACTTTCACATTCCGGACCATTGATAAATGAACCTAGTCCTATGCCAACCAGAGCCAGTTTGTCAACACTTTCTGGTCTGGTTGCAGCGAGGATTTCGACTTCTGAAGAACACCGAGATCGAGCCGGACCTTCACATTCCAATCCCGTAAATCAACGGGTCAGATCACCTAAATCAGTAATCGAGATGGAATCGACTAGAAAGTACGATAGGAAACGACATGCTCATAGAGTTGCAGATTCTTATCAAATTGAGAATCAAAAGCATCATGCTAAACAGCCACCCCCAAATATGTCTGCAGCCATGGCCAACAAAATCTACGCATCAGGCCCCATTCTGGGTTCATCGGACAACGTAGAACAAATTCTGAAAGAACGAGACAGACAGATTCAAGAGTTTGCCCGACAAGCTCGAAATGGTAAATTTCATTTAGTGACAGGCTCTAGAGCACACCGCAACTAG | 1815 | 45.67 | MVKSAISDYPGKGRLPRAAEGEQVAAGWPSWLSSVASEAIKGWIPRRADTFEKLEKIGQGTYSSVYKARDIIHNRLVALKRIRFDNLDIESVKFMAREILILRRLDHPNVIKLEGLITTPRSCSLYLVFEYMEHDLTGLASRPGLKFTEPQIKCYMQQLLRGLDYCHKNGVLHRDIKGSNLLIDDNGILKIADFGLASFYDANNSVPLTSRVVTLWYRPPELLLGVSHYGVEVDLWSVGCILAELYFGNPFLPGKTEVEQLHKIFKLCGSPSDDYWRKLQLPHAAVFKPAHPYRRCVAELLKEYPPAAVALIDALLSIEPSRRGTAATALKSQFFATKPFACDPSSLPKYPPSKEIDTKIRDAARRQEKDGGKGRDRDGDGRQARDSKDCLDPNVKVEFGAPFLRRQGHSSSVSRSDLFNPRSEQPISGFLVAPPKQTRPEKEESRESNSHILSHSGPLINEPSPMPTRASLSTLSGLVAARISTSEEHRDRAGPSHSNPVNQRVRSPKSVIEMESTRKYDRKRHAHRVADSYQIENQKHHAKQPPPNMSAAMANKIYASGPILGSSDNVEQILKERDRQIQEFARQARNGKFHLVTGSRAHRN | 604 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 56137511 | 56140148 | + | Bma016223.1 | Bma02g01380 | 78630 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma02g01380 | 604 | Gene3D | Phosphorylase Kinase; domain 1 | 46 | 138 | - | - | |
Bma02g01380 | 604 | Gene3D | Transferase(Phosphotransferase) domain 1 | 139 | 374 | - | - | |
Bma02g01380 | 604 | MobiDBLite | consensus disorder prediction | 496 | 510 | - | - | |
Bma02g01380 | 604 | MobiDBLite | consensus disorder prediction | 407 | 423 | - | - | |
Bma02g01380 | 604 | MobiDBLite | consensus disorder prediction | 345 | 471 | - | - | |
Bma02g01380 | 604 | MobiDBLite | consensus disorder prediction | 485 | 511 | - | - | |
Bma02g01380 | 604 | ProSitePatterns | Protein kinases ATP-binding region signature. | 57 | 80 | IPR017441 | GO:0005524 | |
Bma02g01380 | 604 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 171 | 183 | IPR008271 | GO:0004672|GO:0006468 | |
Bma02g01380 | 604 | SMART | serkin_6 | 51 | 335 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma02g01380 | 604 | Pfam | Protein kinase domain | 51 | 335 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma02g01380 | 604 | CDD | STKc_CDK9_like | 51 | 335 | - | - | |
Bma02g01380 | 604 | MobiDBLite | consensus disorder prediction | 354 | 393 | - | - | |
Bma02g01380 | 604 | PANTHER | CELL DIVISION PROTEIN KINASE | 13 | 591 | - | - | |
Bma02g01380 | 604 | ProSiteProfiles | Protein kinase domain profile. | 51 | 335 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma02g01380 | 604 | PANTHER | CYCLIN-DEPENDENT KINASE | 13 | 591 | - | - | |
Bma02g01380 | 604 | SUPERFAMILY | Protein kinase-like (PK-like) | 45 | 341 | IPR011009 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma02g01380 | Bma12g00732 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g01380 | Bma-Chr2:56137511 | Bma12g00732 | Bma-Chr12:33566462 | 0 | dispersed | |
Bma15g00446 | Bma-Chr15:4861394 | Bma02g01380 | Bma-Chr2:56137511 | 2.89E-19 | dispersed | |
Bma11g00324 | Bma-Chr11:3049421 | Bma02g01380 | Bma-Chr2:56137511 | 3.54E-115 | transposed | |
Bma11g00543 | Bma-Chr11:7091061 | Bma02g01380 | Bma-Chr2:56137511 | 1.03E-08 | transposed | |
Bma14g00238 | Bma-Chr14:2878166 | Bma02g01380 | Bma-Chr2:56137511 | 0 | transposed | |
Bma15g00068 | Bma-Chr15:810870 | Bma02g01380 | Bma-Chr2:56137511 | 0 | transposed | |
Bma12g00731 | Bma-Chr12:33462028 | Bma02g01380 | Bma-Chr2:56137511 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66377 | PF00069 | Pkinase | 2.90E-67 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma02g01380 | - | - | csv:101207826 | 769.229 |