Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01380 ATGGTAAAATCTGCCATTTCTGATTATCCCGGAAAAGGAAGACTACCCAGGGCTGCAGAAGGAGAGCAAGTTGCAGCCGGGTGGCCGAGTTGGCTCTCGTCCGTGGCCAGTGAAGCGATAAAGGGTTGGATTCCTCGTCGGGCCGATACTTTCGAAAAGCTCGAAAAAATCGGGCAAGGAACGTATAGCAGCGTGTACAAGGCTCGAGACATAATTCACAATAGATTAGTAGCTTTGAAGAGAATAAGATTCGATAATCTCGATATAGAAAGTGTCAAGTTTATGGCAAGGGAAATCCTTATTTTGCGTCGGCTAGACCATCCAAACGTCATAAAACTAGAAGGTTTGATTACTACCCCAAGATCTTGCAGCTTGTACCTCGTTTTCGAGTATATGGAACACGACCTTACGGGGCTGGCATCTCGTCCAGGTCTCAAATTCACCGAACCGCAGATTAAATGTTATATGCAACAACTTCTTCGGGGACTCGATTACTGTCACAAAAATGGTGTTTTGCATCGCGATATAAAGGGCTCGAATCTTCTGATCGATGACAATGGTATCTTGAAAATCGCAGATTTTGGTTTAGCGAGTTTTTACGACGCCAATAATAGTGTTCCTTTGACAAGTCGGGTAGTGACGCTTTGGTATAGACCACCCGAGCTTTTGCTCGGAGTTTCCCACTATGGAGTTGAAGTCGATTTATGGAGTGTTGGTTGTATACTCGCAGAGTTATACTTCGGAAATCCGTTTTTACCCGGAAAGACTGAGGTTGAACAACTACATAAGATATTCAAGCTTTGCGGGTCGCCATCCGATGATTATTGGAGAAAATTGCAGCTACCTCATGCAGCCGTTTTCAAGCCTGCACATCCGTACCGACGATGTGTTGCTGAATTGCTCAAGGAATATCCCCCAGCAGCCGTGGCTCTTATCGATGCTTTGCTTTCTATTGAACCTTCGAGGCGAGGAACTGCAGCTACGGCTTTGAAGAGTCAGTTCTTCGCAACTAAACCATTCGCCTGTGATCCATCGAGTTTGCCTAAATATCCTCCGAGCAAAGAGATTGACACGAAAATACGGGATGCAGCCAGAAGACAGGAGAAGGACGGGGGCAAAGGTCGCGATAGGGATGGCGATGGCAGACAAGCTAGAGATTCAAAGGATTGTCTTGATCCTAATGTAAAAGTAGAATTTGGAGCACCGTTTTTGAGACGACAAGGCCATTCGAGCTCTGTGAGCAGAAGTGACCTCTTCAATCCTAGAAGTGAGCAGCCAATTTCGGGTTTTCTTGTAGCTCCACCTAAACAAACTAGGCCGGAAAAAGAAGAAAGCCGGGAGTCGAACTCACACATACTTTCACATTCCGGACCATTGATAAATGAACCTAGTCCTATGCCAACCAGAGCCAGTTTGTCAACACTTTCTGGTCTGGTTGCAGCGAGGATTTCGACTTCTGAAGAACACCGAGATCGAGCCGGACCTTCACATTCCAATCCCGTAAATCAACGGGTCAGATCACCTAAATCAGTAATCGAGATGGAATCGACTAGAAAGTACGATAGGAAACGACATGCTCATAGAGTTGCAGATTCTTATCAAATTGAGAATCAAAAGCATCATGCTAAACAGCCACCCCCAAATATGTCTGCAGCCATGGCCAACAAAATCTACGCATCAGGCCCCATTCTGGGTTCATCGGACAACGTAGAACAAATTCTGAAAGAACGAGACAGACAGATTCAAGAGTTTGCCCGACAAGCTCGAAATGGTAAATTTCATTTAGTGACAGGCTCTAGAGCACACCGCAACTAG 1815 45.67 MVKSAISDYPGKGRLPRAAEGEQVAAGWPSWLSSVASEAIKGWIPRRADTFEKLEKIGQGTYSSVYKARDIIHNRLVALKRIRFDNLDIESVKFMAREILILRRLDHPNVIKLEGLITTPRSCSLYLVFEYMEHDLTGLASRPGLKFTEPQIKCYMQQLLRGLDYCHKNGVLHRDIKGSNLLIDDNGILKIADFGLASFYDANNSVPLTSRVVTLWYRPPELLLGVSHYGVEVDLWSVGCILAELYFGNPFLPGKTEVEQLHKIFKLCGSPSDDYWRKLQLPHAAVFKPAHPYRRCVAELLKEYPPAAVALIDALLSIEPSRRGTAATALKSQFFATKPFACDPSSLPKYPPSKEIDTKIRDAARRQEKDGGKGRDRDGDGRQARDSKDCLDPNVKVEFGAPFLRRQGHSSSVSRSDLFNPRSEQPISGFLVAPPKQTRPEKEESRESNSHILSHSGPLINEPSPMPTRASLSTLSGLVAARISTSEEHRDRAGPSHSNPVNQRVRSPKSVIEMESTRKYDRKRHAHRVADSYQIENQKHHAKQPPPNMSAAMANKIYASGPILGSSDNVEQILKERDRQIQEFARQARNGKFHLVTGSRAHRN 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 56137511 56140148 + Bma016223.1 Bma02g01380 78630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01380 604 Gene3D Phosphorylase Kinase; domain 1 46 138 - -
Bma02g01380 604 Gene3D Transferase(Phosphotransferase) domain 1 139 374 - -
Bma02g01380 604 MobiDBLite consensus disorder prediction 496 510 - -
Bma02g01380 604 MobiDBLite consensus disorder prediction 407 423 - -
Bma02g01380 604 MobiDBLite consensus disorder prediction 345 471 - -
Bma02g01380 604 MobiDBLite consensus disorder prediction 485 511 - -
Bma02g01380 604 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Bma02g01380 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bma02g01380 604 SMART serkin_6 51 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01380 604 Pfam Protein kinase domain 51 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01380 604 CDD STKc_CDK9_like 51 335 - -
Bma02g01380 604 MobiDBLite consensus disorder prediction 354 393 - -
Bma02g01380 604 PANTHER CELL DIVISION PROTEIN KINASE 13 591 - -
Bma02g01380 604 ProSiteProfiles Protein kinase domain profile. 51 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01380 604 PANTHER CYCLIN-DEPENDENT KINASE 13 591 - -
Bma02g01380 604 SUPERFAMILY Protein kinase-like (PK-like) 45 341 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma02g01380 Bma12g00732 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01380 Bma-Chr2:56137511 Bma12g00732 Bma-Chr12:33566462 0 dispersed
Bma15g00446 Bma-Chr15:4861394 Bma02g01380 Bma-Chr2:56137511 2.89E-19 dispersed
Bma11g00324 Bma-Chr11:3049421 Bma02g01380 Bma-Chr2:56137511 3.54E-115 transposed
Bma11g00543 Bma-Chr11:7091061 Bma02g01380 Bma-Chr2:56137511 1.03E-08 transposed
Bma14g00238 Bma-Chr14:2878166 Bma02g01380 Bma-Chr2:56137511 0 transposed
Bma15g00068 Bma-Chr15:810870 Bma02g01380 Bma-Chr2:56137511 0 transposed
Bma12g00731 Bma-Chr12:33462028 Bma02g01380 Bma-Chr2:56137511 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66377 PF00069 Pkinase 2.90E-67 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01380 - - csv:101207826 769.229