Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01391 ATGGAGGAGACACAAGATGATGTGGGGACTGGTGAGCAAGGGCCTTCCAATGCTTCATGGTGGCCATCAGATTTCTTGGAGGAGTTTGAATCTGTTAATTTGGATTCTCGTGGAGAGACCTTAAGCTCTAAGGAGCGAGTTAGAAGTTCCGAGAAAGATGTGTTATTACCTCAGAAAGCATCTCAAATTCTCTGGCGTACTGGGTTTCTTTCTGACCCAATTCCAAATGGTTTCTATTCTGTCGTTCCGGAGAAAGGGCTCAAAGAGCATTTTAATAGTATTCCAACCCTGGATGAGCTTCTTGCTTTGGAAAGTGAAGGTTTCAAAGCTGATGTTATTCTGGTAGACTCTGAAAAAGATAAAAAGTTGTCTATGCTGAAGCAACTGATTTTGACGCTGGTGAAAGGATTGAGTTCAAATCCCGCTGCAATGATAAAGAAAATTGCTGTATCGGTCGCTGATTTTTATAAACGACCGATTTTGGATAGTCCAGCGAAAGCTACAGCAGAAGATATCTCCCACTTGTTTGACGATCGAGGTATCCAGCTTCTGGGGCAGATAAAACATGGCTCGTGCCGTCCACGGGCAATTCTGTTTAAGGTCCTAGCTGATACTGTAGGTCTTGAGAGCCAACTCATGGTGGGTTTGCCAAATGATGGGGTTGTTGGTTGTGTAGATTCATATAAACACATGTCTGTTACAGTCGTGTTGAACTCAGTGGAACTACTGGTTGATCTTATGAGATTTCCTGGTCAGTTATTACCCTGTTCTGCAAAGGCGATTTTCATGACCCATATATCTGCGGGAGGGGAAAGTGATTCAGCAGAAAATGATTCCTGTGATTCGCCACTCGAACCAAACAGTCCTTTGTATGGGTTTTCAGATAGAGTTGACCTTGACAGCACTGAAAAAGATGACAATCTTCAGTTCCATAGAAAATTTGAACCCTCTTCAAATGTGACTGGTCCTGCCTTGCGCAATATGATGTTGAGATCGGCTACATCTATTGACAGAAAGTTGAGTTTATCGCATAGTGAACCTAACATTGCAACTCCATTTTGGCGGAGAAATCGGAGAAAGGTCATTGCAGAGCAACGGACAGCTAGTTCAAGCTACAGATCAGATGGTGCATCAACTTCAGAGGCTCGGCGAATTAGGAGGAGGAGCATTAGTATTACTCCAGAGATTGGTGATGACATCGTAAGGGCCGTGAAGGCAATGAATGAAACATTGAAGCAGAATCGTCTGTTGAGAGAACGAGCCGATGATAGGTCCTTTTCCAATTCTCCAATTGCTGGAAACAATCGACCAGATGCACAGAGAAATGGTGAAGTAGGCTCGCAAAGAGCAATTTCCTTACCATCATCTCCACATGAATACAGGAGTCAAATATCTGGAAGGAGTGGAACTTTAGAGTTCATCGTAAATGATGCATTGGTCTCAACCTGGACGAAGGTTCTCGAATCTTCCTCCTTGAATGACAAATCTCTATTACCTTATCCAGAATGGAATATTGATTTCTCAGAGCTGACAGTTGGAATTCGCGTTGGAATTGGATTCTTTGGAGAGGTATTCCGTGGCATATGGAATGGAACTGATGTTGCAATCAAGGTTTTCCTGGAGCAAGATCTAACCGTTGAAAACATGGAAGATTTTTGCAACGAGATATCCATTCTCAGCCGTCTTCGACATCCTAATGTTATTTTATTTCTTGGTGCATGCACTAAACCTCCAAGCTTATCAATGGTAACTGAATATATGGAGATGGGATCCTTGTACTCTTTAATCCATCTGAGTGGTCAGAAAAAAAAGCTTAGCTGGCGAAGAAGACTGAAAATGCTCCGCGACATATGCAGGGGGTTGATGTGCATCCACCGAATGAAGATAGTTCATCGCGATCTAAAAAGTGCCAATTGTCTTGTTAATAAGCACTTGACTGTCAAGATCTGTGATTTTGGGCTCTCAAAAATGATCTCGGAAATTCCTGTGACTGGCTCTCCATCTGCTGGAACCCCGGAGTGGATGGCTCCTGAGCTCTTTCGAAATGAACCATTCACTGAAAAATGTGATATTTTCAGCCTGGGAGTGATTATGTGGGAACTCTGCACTCTCAGTAGACCTTGGGAGGGTGTACCTCCAGAGAGGGTTGTTTATGCTGTTGGTTCTGAGGGATCCCGGCTAGATATTCCAGAAGGCCCTCTTGGCCGACTGATATCAGATTGTTGGGCGGAGCCGCATGAGCGACCCAGCTGTGAGGAAATATTTTCGCGCCTACTTGATTGCGAGTATTCACTTAGCTGA 2301 43.81 MEETQDDVGTGEQGPSNASWWPSDFLEEFESVNLDSRGETLSSKERVRSSEKDVLLPQKASQILWRTGFLSDPIPNGFYSVVPEKGLKEHFNSIPTLDELLALESEGFKADVILVDSEKDKKLSMLKQLILTLVKGLSSNPAAMIKKIAVSVADFYKRPILDSPAKATAEDISHLFDDRGIQLLGQIKHGSCRPRAILFKVLADTVGLESQLMVGLPNDGVVGCVDSYKHMSVTVVLNSVELLVDLMRFPGQLLPCSAKAIFMTHISAGGESDSAENDSCDSPLEPNSPLYGFSDRVDLDSTEKDDNLQFHRKFEPSSNVTGPALRNMMLRSATSIDRKLSLSHSEPNIATPFWRRNRRKVIAEQRTASSSYRSDGASTSEARRIRRRSISITPEIGDDIVRAVKAMNETLKQNRLLRERADDRSFSNSPIAGNNRPDAQRNGEVGSQRAISLPSSPHEYRSQISGRSGTLEFIVNDALVSTWTKVLESSSLNDKSLLPYPEWNIDFSELTVGIRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTVENMEDFCNEISILSRLRHPNVILFLGACTKPPSLSMVTEYMEMGSLYSLIHLSGQKKKLSWRRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHLTVKICDFGLSKMISEIPVTGSPSAGTPEWMAPELFRNEPFTEKCDIFSLGVIMWELCTLSRPWEGVPPERVVYAVGSEGSRLDIPEGPLGRLISDCWAEPHERPSCEEIFSRLLDCEYSLS 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 56185935 56203577 + Bma016234.1 Bma02g01391 78641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01391 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Bma02g01391 766 MobiDBLite consensus disorder prediction 1 22 - -
Bma02g01391 766 Gene3D Transferase(Phosphotransferase) domain 1 589 765 - -
Bma02g01391 766 PANTHER MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE-LIKE PROTEIN-RELATED 369 764 - -
Bma02g01391 766 PANTHER MITOGEN ACTIVATED PROTEIN KINASE KINASE KINASE-LIKE PROTEIN-RELATED 29 371 - -
Bma02g01391 766 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 29 371 - -
Bma02g01391 766 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 369 764 - -
Bma02g01391 766 Gene3D Phosphorylase Kinase; domain 1 503 588 - -
Bma02g01391 766 ProSiteProfiles Protein kinase domain profile. 510 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01391 766 Pfam Protein tyrosine and serine/threonine kinase 512 758 IPR001245 GO:0004672|GO:0006468
Bma02g01391 766 MobiDBLite consensus disorder prediction 427 459 - -
Bma02g01391 766 ProSitePatterns Protein kinases ATP-binding region signature. 516 537 IPR017441 GO:0005524
Bma02g01391 766 MobiDBLite consensus disorder prediction 415 459 - -
Bma02g01391 766 SUPERFAMILY Protein kinase-like (PK-like) 486 757 IPR011009 -
Bma02g01391 766 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Bma02g01391 766 SMART serkin_6 510 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g01391 766 CDD STKc_MAP3K-like 516 758 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01391 Bma-Chr2:56185935 Bma06g00066 Bma-Chr6:1049558 1.16E-07 dispersed
Bma02g01391 Bma-Chr2:56185935 Bma10g00075 Bma-Chr10:773719 1.75E-77 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66379 PF07714 PK_Tyr_Ser-Thr 9.80E-60 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01391 - - cmo:103490492 1209.13