Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01394 CTCAGATCGGCTATGGCCTACTCCAAGGACCGCGAGACCTTGATTTATGTCGCCAAGCTGGCTGAACAGGCTGAGCGTTACGATGAGATGGTGGAAGCAATGAAGAGTGTTGCAGAGCTTGATGTTGAATTGACAGTTGAAGAGCGCAATTTACTGTCTGTCGGATATAAGAATGTCGTTGGTGCACGAAGAGCCTCGTGGAGGATTTTATCGTCAATAGAGCAGAAGGAAGAAGCTAAAGGAAATGAAGCTAATGCCAAAAGAATAAAGGGATATCGTCACAAGGTTGAATCAGAGCTATCAACAATTTGTGGTGATATCATGACTGTGATTGATGAGCATTTAATTCCTTCAGCCACAGCTGGTGAATCAACAGTATTCTACTATAAGATGAAAGGAGACTATTATCGGTATCTTGCGGAATTCAAAGCTGGTAATGAGAAGAAAGAGGCTGCCGATCAATCTATGAAAGCCTATGAGGCTGCAACCAGCTCTGCTGAAGCTGATTTACCACCTACACATCCCATCCGATTGGGCTTGGCATTGAATTTCTCTGTCTTTTATTATGAGATCATGAATTCACCTGAGAGGGCCTGCCACCTCGCAAAGCAAGCTTTTGATGAAGCCATCTCCGAGCTTGATACTTTGAACGAGGAATCATACAAGGACAGCACTTTAATCATGCAGCTTCTTCGAGACAATTTAACATTGTGGACTTCTGACATTCCTGAGGATGGAGGTGACTAA 747 43.78 LRSAMAYSKDRETLIYVAKLAEQAERYDEMVEAMKSVAELDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNEANAKRIKGYRHKVESELSTICGDIMTVIDEHLIPSATAGESTVFYYKMKGDYYRYLAEFKAGNEKKEAADQSMKAYEAATSSAEADLPPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGGD 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 56212509 56214411 + Bma016237.1 Bma02g01394 78644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01394 248 SMART 1433_4 11 248 IPR023410 -
Bma02g01394 248 Coils Coil 17 37 - -
Bma02g01394 248 ProSitePatterns 14-3-3 proteins signature 1. 49 59 IPR023409 -
Bma02g01394 248 SUPERFAMILY 14-3-3 protein 10 241 IPR036815 -
Bma02g01394 248 Gene3D - 2 247 IPR036815 -
Bma02g01394 248 Coils Coil 199 219 - -
Bma02g01394 248 Pfam 14-3-3 protein 18 239 IPR023410 -
Bma02g01394 248 PANTHER BNAC03G57490D PROTEIN 6 246 - -
Bma02g01394 248 ProSitePatterns 14-3-3 proteins signature 2. 221 240 IPR023409 -
Bma02g01394 248 PIRSF 14-3-3 5 248 IPR000308 -
Bma02g01394 248 PRINTS 14-3-3 protein zeta signature 158 184 IPR000308 -
Bma02g01394 248 PRINTS 14-3-3 protein zeta signature 43 72 IPR000308 -
Bma02g01394 248 PRINTS 14-3-3 protein zeta signature 185 211 IPR000308 -
Bma02g01394 248 PRINTS 14-3-3 protein zeta signature 92 116 IPR000308 -
Bma02g01394 248 PRINTS 14-3-3 protein zeta signature 212 241 IPR000308 -
Bma02g01394 248 PRINTS 14-3-3 protein zeta signature 123 145 IPR000308 -
Bma02g01394 248 PANTHER 14-3-3 PROTEIN 6 246 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01394 Bma-Chr2:56212509 Bma11g01000 Bma-Chr11:45385981 1.74E-154 dispersed
Bma14g01663 Bma-Chr14:35272720 Bma02g01394 Bma-Chr2:56212509 1.14E-151 transposed
Bma12g00720 Bma-Chr12:32286893 Bma02g01394 Bma-Chr2:56212509 2.30E-177 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01394 K06630 - gmx:100801348 441.81