Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01405 AAAAACATGAAGCTTGATGAGAAGAGCCACCTGCGGGAGACGATGTGCAGGACCATTGAAGTCGATGAGGTCGATCGCAACCGCCGTCTCACTTCCGTCGTTTTGACGGCCTCCGGGGACTTCGACAGGGACGCCGACGACTTATTCACCCCTCCTCTTAATTTCTCTCTCGTCGATAATGCTATTTTCCGCTCCGGTTTTCCCGACTCTGCCAACTTCTCCTTCCTTCAAACCCTAGGCCTCCGCTCCGTTATATGTTTGTGTCCTGAACCATATCCAGACGCTAATAAAGAGTTTCTGAAGGCTAATGGAATCAGATTGTTCCAATTTGGGATTGAAAGTTATAAGGAACCTTTTGTGAACATCCCAGAGGATACCATCCGTGAAGCTCTGAAAGTTGTTCTTGACGCGAGAAATCACCCTATTCTGATCCATTGTAAGCGGGGGAAGCATCGAACTGGTTGTCTCGTGGGATGCTTGAGAAAATTGCAGAGATGGTGTCTTTCGTCGGTTTTCGACGAGTACCAGCGATTTGCAGCCTCCAAAGCCAGACTTTCCGACCAGAGGTTCATGGAGTTGATCGATGTTTCGAGCTTAAAACATCTGCCCATGTCATTTTCATGCTCCAAGAGG 633 48.34 KNMKLDEKSHLRETMCRTIEVDEVDRNRRLTSVVLTASGDFDRDADDLFTPPLNFSLVDNAIFRSGFPDSANFSFLQTLGLRSVICLCPEPYPDANKEFLKANGIRLFQFGIESYKEPFVNIPEDTIREALKVVLDARNHPILIHCKRGKHRTGCLVGCLRKLQRWCLSSVFDEYQRFAASKARLSDQRFMELIDVSSLKHLPMSFSCSKR 211
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 56279284 56280525 - Bma030951 Bma02g01405 78655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01405 211 PRINTS Plant and fungal dual specificity phosphatase signature 122 136 IPR020428 GO:0016791
Bma02g01405 211 PRINTS Plant and fungal dual specificity phosphatase signature 105 119 IPR020428 GO:0016791
Bma02g01405 211 PRINTS Plant and fungal dual specificity phosphatase signature 49 66 IPR020428 GO:0016791
Bma02g01405 211 PRINTS Plant and fungal dual specificity phosphatase signature 86 99 IPR020428 GO:0016791
Bma02g01405 211 PANTHER TYROSINE-PROTEIN PHOSPHATASE 5 209 - -
Bma02g01405 211 PANTHER PHOSPHOTYROSINE PROTEIN PHOSPHATASES SUPERFAMILY PROTEIN ISOFORM 1 5 209 - -
Bma02g01405 211 ProSiteProfiles Dual specificity protein phosphatase domain profile. 54 206 IPR020422 GO:0006470|GO:0008138
Bma02g01405 211 Pfam Tyrosine phosphatase family 51 201 IPR004861 -
Bma02g01405 211 CDD PFA-DSP_Siw14 48 195 - -
Bma02g01405 211 ProSitePatterns Tyrosine specific protein phosphatases active site. 144 154 IPR016130 GO:0016311|GO:0016791
Bma02g01405 211 Gene3D Protein tyrosine phosphatase superfamily 49 198 IPR029021 -
Bma02g01405 211 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 49 195 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01405 Bma-Chr2:56279284 Bma08g00538 Bma-Chr8:31588203 1.48E-67 dispersed
Bma02g00600 Bma-Chr2:13616873 Bma02g01405 Bma-Chr2:56279284 2.06E-70 transposed
Bma03g01308 Bma-Chr3:25800582 Bma02g01405 Bma-Chr2:56279284 1.03E-105 transposed
Bma02g01405 Bma-Chr2:56279284 Bma08g00533 Bma-Chr8:31164361 5.85E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01405 K18045 - vvi:100251662 331.643