Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g01418 ATGGAGGCCTCATTCTGTTGGCTAACGATTATCTTTGTTTTCCTTGCCGATTTGGACTTCTTGGTGGCGGAGGCATCGCCTTTAAATGCTTCTGGAAAGCAACGATCGGCAGCATCTCTTCTGTCAATCTCTCACTACCAACGCTCGTGCCCAGCTGCGGAGGGCATCATCCAAAAGAGAGTCGGAGCCGCCATCACAAAAGATTCCACCTTGGCTGCTTCAATCATTCGCCTTCATTTCCATGATTGTGCTGTCAGGGGCTGTGATGCGTCTGTTTTACTGAACCACCGGGGAAGCGAAAGAAGAGCAAAGGCCAGCAAGACCCTCAGGGGATTCGAATTGATGGACGATATAAAGGCAGAGCTTGAGAAGAGGTGCCCAAGAACTGTGTCCTGCGCAGACATCCTAACCGCTGCCGCTAGAGATGCCACCATTATTGTGGGAGGCCCATTCTGGGAAGTCCCGTTTGGGCGTAAAGATGGGAGAATTTCCCTGGCTGCAGAAGCCGAAGAGGTTCCACAAGGCCACGAGAACATCACCTCTTTGATTGAATACTTCAGAGCCAGAGGGTTGGATGTGCTGGATTTGGTTACACTTTCAGGGGCCCATACCATCGGTAGAACAAGTTGCCATGCGATTATGGATAGGCTGTATAACTTCAATAATACCAGGAAGCCTGATCCCCAGCTGAGCCCGTCATTTCTAAGCGACATTATAAGATTGCCAAGGTTGTTCCGATTCCTCCAAAAGCCATTGGCAAAATTTATATCTATTCTCAGAGCACCCAAGAGCATGGAAGGCTATGCCTCAATTGGTGGTGGTTCTCCACTTCGAAAAATTACTGATGATCAGGCAAAAGAGCTGGAGAATGCCCTTTCCGAAAAGAAAATCCCTGCTAAGGTATATGTTGGCATGAGATACTGGCATCCATTCACCGAAGAAGCTATTCAACAGATTAAAAAAGATGGGATTACAAAACTTGTTGTTCTTCCTCTTTATCCCCAATTCTCAATATCAACAAGTGGTTCAAGCCTGAGGCTCTTGGAGAATCTGTTCCGGGAGGACGAGTATTTAATTAATATGCAACACACAGTAATTCCGTCATGGTATCAACGAGAAGGCTACATTAAGGCCATGTCAGATTTGATTGAAAAGGAACTAAAATACTTTAATGGCCCTGAAAAGGTCATGATATTTTTTAGTGCGCATGGGGTCCCGCTTGCATATGTGGAGGAGGCTGGGGATCCTTATAAAGCAGAGATGGAGGAATGCGTTGATCTCATTATGGAAGAATTAGAAAAGAGAAAAATTACAAATTCATATACACTAGCATATCAGAGCAGAGTTGGACCTGTGGAATGGCTAAAACCCTATACAGATGAGACTATAATTGAGCTAGGGAAAAGAGGAGTCAATAGTCTTCTGGCTGTACCCATTAGCTTTGTCAGTGAGCATATTGAGACTCTAGAGGAAATAGATGTTGAATACAAAGAGTTGGCTTTAAAATCTGGAATAGAAAATTGGGGACGAGTACCTGCATTAGGTTGTGAGCCCACGTTTATTTCAGATTTGGCAGACGCTGTTATTGAGAGTCTCCCATACGTTGGAGCTATGGCTGTCTCAAATCTTGAAGCTCGACAGTCGTTAGTTCCACTCGGCAGTGTGGAAGAGATATTAGGTACATATAATTCACAGCGTAGGGAGCTACCACCACCTGTGATGGTATGGGAATGGGGATGGACTACAAGTGCTGAAACCTGGAATGGAAGAGCGGCTATGCTTGCAGTACTTGTACTACTAGTGCTTGAGGTCACCACGGGCGAGGGGTTTGTGCACCAGTGGGGGCGCTTGCCTTTGTTTCGCTGA 1866 45.93 MEASFCWLTIIFVFLADLDFLVAEASPLNASGKQRSAASLLSISHYQRSCPAAEGIIQKRVGAAITKDSTLAASIIRLHFHDCAVRGCDASVLLNHRGSERRAKASKTLRGFELMDDIKAELEKRCPRTVSCADILTAAARDATIIVGGPFWEVPFGRKDGRISLAAEAEEVPQGHENITSLIEYFRARGLDVLDLVTLSGAHTIGRTSCHAIMDRLYNFNNTRKPDPQLSPSFLSDIIRLPRLFRFLQKPLAKFISILRAPKSMEGYASIGGGSPLRKITDDQAKELENALSEKKIPAKVYVGMRYWHPFTEEAIQQIKKDGITKLVVLPLYPQFSISTSGSSLRLLENLFREDEYLINMQHTVIPSWYQREGYIKAMSDLIEKELKYFNGPEKVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNSYTLAYQSRVGPVEWLKPYTDETIIELGKRGVNSLLAVPISFVSEHIETLEEIDVEYKELALKSGIENWGRVPALGCEPTFISDLADAVIESLPYVGAMAVSNLEARQSLVPLGSVEEILGTYNSQRRELPPPVMVWEWGWTTSAETWNGRAAMLAVLVLLVLEVTTGEGFVHQWGRLPLFR 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 56414545 56436971 - Bma016259.1 Bma02g01418 78668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g01418 621 SUPERFAMILY Heme-dependent peroxidases 41 238 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 Gene3D - 370 513 - -
Bma02g01418 621 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 236 542 - -
Bma02g01418 621 SUPERFAMILY Chlorophyll a-b binding protein 576 616 - -
Bma02g01418 621 Pfam Ferrochelatase 234 531 IPR001015 GO:0004325|GO:0006783
Bma02g01418 621 ProSitePatterns Ferrochelatase signature. 398 419 IPR019772 GO:0004325|GO:0006783
Bma02g01418 621 PANTHER FERROCHELATASE 236 542 IPR001015 GO:0004325|GO:0006783
Bma02g01418 621 ProSiteProfiles Plant heme peroxidase family profile. 40 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 TIGRFAM hemH: ferrochelatase 237 532 IPR001015 GO:0004325|GO:0006783
Bma02g01418 621 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Bma02g01418 621 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 CDD Ferrochelatase_N 233 371 IPR033659 -
Bma02g01418 621 Hamap Coproporphyrin III ferrochelatase [cpfC]. 211 532 IPR001015 GO:0004325|GO:0006783
Bma02g01418 621 Pfam Peroxidase 58 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma02g01418 621 CDD secretory_peroxidase 41 236 IPR033905 GO:0004601|GO:0042744
Bma02g01418 621 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Bma02g01418 621 Gene3D - 236 531 - -
Bma02g01418 621 SUPERFAMILY Chelatase 237 538 - -
Bma02g01418 621 Gene3D - 41 187 - -
Bma02g01418 621 CDD Ferrochelatase_C 377 515 IPR033644 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01418 Bma-Chr2:56414545 Bma12g00567 Bma-Chr12:24670641 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g01418 K01772 - pvy:116129811 687.567