Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g00029 | ATGACCCCGAAACGACCTCTCTTGATTCCGTCGCCAAGAACTCCAAACACCTACGACGTTTCTCCCGTACCCACCAACAACGATTTAGTAAAACCCAATTCCGGCGACGTCAGTTCGTTTTCCGTCATGGATTTTGGAAACCCAGTTGATAAAGTTTCAAATTTTGAGCTAAATTACCAGTCTTCCTCCCTTAAAAGCGTTTCCTCGTCACATTCGAAGACATCCGGTGGCAATTCTTTACGGGAAGTTAGTTTTGGGGATATGGGATCAAAACCAGTGCGTTTTGGATCGAGGCGTGCTGATTCTGAAGCTCTTAGCGTGTCCCAGAAGGAGATCAACGATGAAGACGCTAGATTGGTCCACATAAATAATTCTGGGACGACAAATGAGAAGTTTGACTTAGCTAGGAATTCAATTCGTACTGCCAAGTATTCATTGATAACTTTCGTCCCCAGAAATCTTTTTGAACAGTTTCATAGAATTGCTTACATTTATTTTCTCATCATTGCTGTGCTTAATCAACTCCCTCAGCTTGCCGTGTTTGGCCGGGGGGTCTCTATTCTTCCACTGGCCTTTGTACTTCTAGTTACAGCAGTTAAGGATGGTTTTGAGGATTGGAGGAGACACCAATCAGATCGGATAGAAAATAATCGTTTAGCGTCTGTTTTTATTAATGATCAGTTTCAACCAAAGAAGTGGAGGGATATTACAGTTGGTGAAATCATCAAACTTCATGCAAATGAAACAATTCCTTGTGATATGGTTTTGCTCTCTACTAGTGATCCTACTGGCGTCTCATATGTGCAAACTATTAATTTAGACGGAGAATCAAATTTAAAGACAAGATATGCCAAACAAGAGACTTTGTCAAAGATCCCTGAGAAGGAGAAGATTAGTGGGTTGATAAAATGTGAGAAGCCAAACCGGAACATTTATGGATTTCAAGCTAACATGGAAATTGATGGAAAGAGACTCTCCCTTGGACCTTCAAACATTGTTCTTCGGGGATGTGAACTGAAGAACACGAGCTGGGCACTGGGTGTGGCAGTCTATTGTGGCAGTGAGACCAAAGTTATGCTCAATAGCTCTGGAGCTCCTTCTAAGAGGAGTCGGCTCGAGACCCGTATGAATATAGAGATCATCTTGCTCTCACTTTTCCTCATTGCATTGTGTGCTGTTGTCTCAATTTGTGCTGCTGTTTGGTTCATAAGGAAGGGAGATGAATTGAACACATTGCCTTATTTCAGGAAGGAGGACTTTTCAAAGGGAGCAGCTGAAAACTACAACTTCTATGGATGGGGACTAGAGACGTTATTTGTATTCCTCATGTGTGTCATAGTTTTCCAGATTATGATTCCCATTTCATTGTACATTTCTATGGAGCTAGTCCGGGTGGGTCAGGCATATTTCATGATCAATGATTCAGACATGTATGATGAAGCTTCTAATTCGAGATTCCAATGCCGGGCACTGAACATTAATGAAGATTTAGGACAAATTGGATATGTCTTTTCAGACAAAACTGGTACTCTGACTGAGAACAAGATGGAATTTCAAAGTGCAAGCATTTGGGGAGTGGATTACAGAGGAGGCATCCATGCCAGTTCCCATGGATTATTTGACAATTCTGTTCAAGTTGATGGAAAGATTCTAACGCCGAGAATGAGGGTGAAGGTTGATCCTGAGCTTCTACGGTTGGCGAAAACTGGAAAGAACACAAAGAAAGGAAAACACATACATGATTTCTTCCTGGCATTGGCTGCATGTAATACCATAGTTCCTATTATTACTGAGACTGCTGATTCATCCGTGAATTTAATTGATTATCAAGGAGAATCTCCAGATGAACAGGCATTGGTTTATGCTGCAGCTGCCTATGGTTTTGTGCTTATAGAACGAACGTCTGGCCACATAGTAATTGATTTCCAAGGAGAAAGGACAATGTTCAATGTTTTGGGTCTGCATGAATTTGATAGTGACCGGAAGCGAATGTCTGTAATATTGGGTTGCCCTGACAACACCTTTAAGGTTTTTGTGAAGGGCGCGGACACCACTATGTTCAAAGTGATAGATAAATCCTCAAACTGGAAAATTATAAGCACAACTGATGCCCATCTTCACTCTTACTCATCTCTCGGTTTGAGAACACTAGTCGTGGGAATGAAGGAGCTGAGCGGCCCAGAATTCGAGCAATGGCATGTGGCCTTTGAAGAAGCAAGCACTGCTCTGATGGGCAGGGCTTCACTTCTCCGCAAGGTGGCTAGCTATGTAGAGAAAAATCTCAATATACTAGGTGCTTCTGGCATTGAAGATAAGTTGCAAAAAGGTGTTCCAGAGGCGATAGTGTCTTTGAGAACAGCTGGAATTAAAGTTTGGGTTTTGACTGGAGATAAGCAAGAAACTGCCATATCAATTGGTTACTCTTCAAAGCTCCTAACAAGCAGGATGACTCAAATTATCGTCAACAGCAATTCAAAAGAATCATGTAGGCGGAGTTTAGATGATGCTATTGTTATGTCCAAGAAGGTAATGACTGTGACAGAGGTCAGAAATGAAACTAGTGATGGAGTCTCTGCAACTCAAGTGGCTTTGATCATAGATGGTACAAGCCTGGTTTATATTCTGGATAGTGAACTTGAGGAACAGCTATTTGAATTGGCTAGTAATTGCTTAGTGGTGCTATGCTGCCGAGTAGCTCCGTTGCAAAAGGCGGGCATCGTGGCACTTGTCAAGAAACGAACATCCGAGATGACACTTGCCATTGGGGATGGTGCTAATGATGTTTCAATGATCCAAATGGCTGATGTGGGGGTGGGCATCAGTGGGCAGGAGGGTCGACAAGCTGTGATGGCATCAGATTTTGCAATGGGGCAGTTTAGATTCTTGGTTCCTCTGCTATTGGTGCATGGTCATTGGAATTATCAGCGGATGGCTTACATGATTTTGTACAATTTTTACAGAAATGCAGTTTTCGTTCTTATTTTGTTTTGGTATGTATTATTTACCAGTTTCTCTTTGACAACCGCGATAAACGAATGGAGCAGTATGCTATATTCTATAATATATACTTCTCTTCCAACAATTATTGTCGGGGTTCTCGACAAGAACCTGAGCCGAATGACTCTTCTAAAGTACCCTCCACTTTATGGGGCTGGGCATAGACAAGAGAGCTACAACTCAAAACTGTTTTGGTTTACTATGACAGACACTGTGTGGCAAAGTATTGCAGTTTTCTTCATCCCGCTTCTTGCATATTGGGGCAGCACTATTGATGTGTCGAGCATCGGAGATCTTTGGACGCTTGCTATCGTTATACTGGTCAACTTACACTTGGCCATGGATGTTATCCGGTGGAATTGGATTACTCATGCCGCAATTTGGGGATCCATAGTTGCCACTTTCATTTGTGTTTTGATCATTGATGCCATTCCTTCATTTTTCGGTTACTGGGCTATCTTTCATATCGCTGGCACGGCATCCTTCTGGCTCTGCTTGCTTGCTATCATCGTGGCCTCCTTGATTCCTCGTTTCGTCGTGAAAATTCTTTGTCAATATTACAGTCCTAGTGATATTCAGATAGCCAGAGAAGCCGAAAAATATGGAAATCTAAGGGAGGGTGGAGCTGAACAAATTGAATTGCACCCTCTTCAGGGATAA | 3657 | 42.3 | MTPKRPLLIPSPRTPNTYDVSPVPTNNDLVKPNSGDVSSFSVMDFGNPVDKVSNFELNYQSSSLKSVSSSHSKTSGGNSLREVSFGDMGSKPVRFGSRRADSEALSVSQKEINDEDARLVHINNSGTTNEKFDLARNSIRTAKYSLITFVPRNLFEQFHRIAYIYFLIIAVLNQLPQLAVFGRGVSILPLAFVLLVTAVKDGFEDWRRHQSDRIENNRLASVFINDQFQPKKWRDITVGEIIKLHANETIPCDMVLLSTSDPTGVSYVQTINLDGESNLKTRYAKQETLSKIPEKEKISGLIKCEKPNRNIYGFQANMEIDGKRLSLGPSNIVLRGCELKNTSWALGVAVYCGSETKVMLNSSGAPSKRSRLETRMNIEIILLSLFLIALCAVVSICAAVWFIRKGDELNTLPYFRKEDFSKGAAENYNFYGWGLETLFVFLMCVIVFQIMIPISLYISMELVRVGQAYFMINDSDMYDEASNSRFQCRALNINEDLGQIGYVFSDKTGTLTENKMEFQSASIWGVDYRGGIHASSHGLFDNSVQVDGKILTPRMRVKVDPELLRLAKTGKNTKKGKHIHDFFLALAACNTIVPIITETADSSVNLIDYQGESPDEQALVYAAAAYGFVLIERTSGHIVIDFQGERTMFNVLGLHEFDSDRKRMSVILGCPDNTFKVFVKGADTTMFKVIDKSSNWKIISTTDAHLHSYSSLGLRTLVVGMKELSGPEFEQWHVAFEEASTALMGRASLLRKVASYVEKNLNILGASGIEDKLQKGVPEAIVSLRTAGIKVWVLTGDKQETAISIGYSSKLLTSRMTQIIVNSNSKESCRRSLDDAIVMSKKVMTVTEVRNETSDGVSATQVALIIDGTSLVYILDSELEEQLFELASNCLVVLCCRVAPLQKAGIVALVKKRTSEMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMAYMILYNFYRNAVFVLILFWYVLFTSFSLTTAINEWSSMLYSIIYTSLPTIIVGVLDKNLSRMTLLKYPPLYGAGHRQESYNSKLFWFTMTDTVWQSIAVFFIPLLAYWGSTIDVSSIGDLWTLAIVILVNLHLAMDVIRWNWITHAAIWGSIVATFICVLIIDAIPSFFGYWAIFHIAGTASFWLCLLAIIVASLIPRFVVKILCQYYSPSDIQIAREAEKYGNLREGGAEQIELHPLQG | 1218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 313319 | 317912 | + | Bma016298.1 | Bma03g00029 | 78702 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g00029 | 1218 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 506 | 512 | IPR018303 | - | |
Bma03g00029 | 1218 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 10 | 1216 | - | - | |
Bma03g00029 | 1218 | SUPERFAMILY | Calcium ATPase, transduction domain A | 217 | 359 | IPR008250 | - | |
Bma03g00029 | 1218 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 893 | 1005 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bma03g00029 | 1218 | Gene3D | - | 196 | 361 | - | - | |
Bma03g00029 | 1218 | Gene3D | - | 761 | 961 | IPR023214 | - | |
Bma03g00029 | 1218 | Gene3D | - | 606 | 746 | IPR023299 | GO:0000166 | |
Bma03g00029 | 1218 | SFLD | p-type atpase | 488 | 972 | IPR044492 | - | |
Bma03g00029 | 1218 | SUPERFAMILY | HAD-like | 499 | 976 | IPR036412 | - | |
Bma03g00029 | 1218 | MobiDBLite | consensus disorder prediction | 14 | 32 | - | - | |
Bma03g00029 | 1218 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 136 | 1188 | IPR023298 | - | |
Bma03g00029 | 1218 | SFLD | C1.7: P-type atpase like | 488 | 972 | - | - | |
Bma03g00029 | 1218 | PRINTS | P-type cation-transporting ATPase superfamily signature | 921 | 940 | - | - | |
Bma03g00029 | 1218 | PRINTS | P-type cation-transporting ATPase superfamily signature | 504 | 518 | - | - | |
Bma03g00029 | 1218 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 136 | 1196 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
Bma03g00029 | 1218 | Pfam | Phospholipid-translocating ATPase N-terminal | 120 | 185 | IPR032631 | - | |
Bma03g00029 | 1218 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 510 | 777 | IPR023299 | GO:0000166 | |
Bma03g00029 | 1218 | Pfam | Cation transport ATPase (P-type) | 612 | 688 | - | - | |
Bma03g00029 | 1218 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Bma03g00029 | 1218 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 949 | 1189 | IPR032630 | - | |
Bma03g00029 | 1218 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 10 | 1216 | - | - | |
Bma03g00029 | 1218 | CDD | P-type_ATPase_APLT_Dnf-like | 136 | 1081 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00029 | Bma-Chr3:313319 | Bma14g01495 | Bma-Chr14:30220082 | 0 | dispersed | |
Bma01g01707 | Bma-Chr1:53121903 | Bma03g00029 | Bma-Chr3:313319 | 0 | transposed | |
Bma03g00745 | Bma-Chr3:6757998 | Bma03g00029 | Bma-Chr3:313319 | 1.36E-173 | transposed | |
Bma03g00029 | Bma-Chr3:313319 | Bma08g01184 | Bma-Chr8:50755484 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g00029 | K14802 | - | zju:107406555 | 1890.16 |