Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g00061 | ATGATTCCTACTGACTGGATTTTCTTACTATTTCTCTTGACCTGTCTGTGTTCTTCAGCCATGGCTGCCCTCAATCTCACCATTCCTCATCAACACCCTCACCCAGATTTGGTTGCTATGCAAGTTCAAAGAACAATCAATGAATCTGTATGGCGAAGACAAACACTTTCACTTCAAGAAAAAGATCAAACTTACCAGTGTCTCACCGGAAACCCAATCGACGATTGTTGGCGATGCGACTCCAACTGGGAGACGAATCGGCAAAGGCTCGCCGACTGCGGAATCGGATTCGGAAGAGACGCCATGGGGGGCAAGGGCGGCCAATTCTACATCGTCACGGACTCCTCCGATAAGGACCCGGCCAACCCCACCCCCGGCACTCTCCGGCACGCCGTGATCCAAGTGGAACCCCTCTGGATTATCTTCTCCAGAGACATGACTATAAAACTCAAACACGAACTCATCGTAAGCAGTTTCAAAACCATCGATGGCCGGGGAGCGAAAGTCCAGATAACCGGCGGCGGCTGCATTACTCTTCAGTTCATCTCGAACGTAATAATCCACAGCGTCTTCATCCACCATTGCGTACCCACCGGGAATTCAAACATTCGATCGAGTCCAACGCACGTCGGGCACCGTGGCAGATCGGACGGCGACGGAATCTCAATCTACAGCTCGAGAAATATCTGGATCGATCATTGCTCCCTCGCGTACTGTACGGACGGACTTATAGACGCTATAATGGGGTCGACCGGAATCACCATCTCGAACAGCTATTTCTCACACCATAACGAGGTGATGCTTCTGGGGCACGACGATAGGCATGAACCAGACTCCGGTATGCAGGTGACCATCGCCTTCAACCACTTCGGCGAGGCGCTGGTGCAGCGTATGCCCAGGTGTAGACGCGGGTACATACACGTGGTCAACAATGATTTCACGGCGTGGGAGATGTACGCCATAGGAGGTAGTGCCAGTCCGACCATTAATAGCCAAGGGAATCGATACACCGCTCCGCTCGACCCTTACGCCAAGGAGGTGACTAAGCGGGTGGAGACAGACGAGAGAGAGTGGAGCGACTGGAACTGGAGGACGGAGGGGGACATAATGGTGAACGGAGCGTTCTTCGTGCCATCAGGACAAGGCCTGAGCCCTCAGTTCACCAAAGCCTCCAGCGTGGAGCCCAAGTCCGTCGCTCTTATCGACCAACTCACCCTCTACTCCGGCGTGCTTGGAAACCCAGGGTAG | 1248 | 53.53 | MIPTDWIFLLFLLTCLCSSAMAALNLTIPHQHPHPDLVAMQVQRTINESVWRRQTLSLQEKDQTYQCLTGNPIDDCWRCDSNWETNRQRLADCGIGFGRDAMGGKGGQFYIVTDSSDKDPANPTPGTLRHAVIQVEPLWIIFSRDMTIKLKHELIVSSFKTIDGRGAKVQITGGGCITLQFISNVIIHSVFIHHCVPTGNSNIRSSPTHVGHRGRSDGDGISIYSSRNIWIDHCSLAYCTDGLIDAIMGSTGITISNSYFSHHNEVMLLGHDDRHEPDSGMQVTIAFNHFGEALVQRMPRCRRGYIHVVNNDFTAWEMYAIGGSASPTINSQGNRYTAPLDPYAKEVTKRVETDEREWSDWNWRTEGDIMVNGAFFVPSGQGLSPQFTKASSVEPKSVALIDQLTLYSGVLGNPG | 415 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 510136 | 511638 | + | Bma016331.1 | Bma03g00061 | 78734 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g00061 | 415 | SMART | amb_all | 145 | 342 | IPR002022 | - | |
Bma03g00061 | 415 | PANTHER | PECTATE LYASE | 8 | 412 | - | - | |
Bma03g00061 | 415 | Pfam | Pectate lyase | 151 | 334 | IPR002022 | - | |
Bma03g00061 | 415 | SUPERFAMILY | Pectin lyase-like | 61 | 389 | IPR011050 | - | |
Bma03g00061 | 415 | Gene3D | - | 70 | 412 | IPR012334 | - | |
Bma03g00061 | 415 | PRINTS | Pollen allergen Amb family signature | 297 | 316 | IPR018082 | - | |
Bma03g00061 | 415 | PRINTS | Pollen allergen Amb family signature | 361 | 385 | IPR018082 | - | |
Bma03g00061 | 415 | PRINTS | Pollen allergen Amb family signature | 117 | 142 | IPR018082 | - | |
Bma03g00061 | 415 | PRINTS | Pollen allergen Amb family signature | 390 | 413 | IPR018082 | - | |
Bma03g00061 | 415 | PRINTS | Pollen allergen Amb family signature | 319 | 338 | IPR018082 | - | |
Bma03g00061 | 415 | PRINTS | Pollen allergen Amb family signature | 93 | 110 | IPR018082 | - | |
Bma03g00061 | 415 | PRINTS | Pollen allergen Amb family signature | 153 | 169 | IPR018082 | - | |
Bma03g00061 | 415 | PRINTS | Pollen allergen Amb family signature | 217 | 238 | IPR018082 | - | |
Bma03g00061 | 415 | PANTHER | PECTATE LYASE 18-RELATED | 8 | 412 | IPR045032 | GO:0030570 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00061 | Bma-Chr3:510136 | Bma04g00585 | Bma-Chr4:5602715 | 0 | dispersed | |
Bma08g01130 | Bma-Chr8:50205174 | Bma03g00061 | Bma-Chr3:510136 | 9.48E-49 | transposed | |
Bma15g00907 | Bma-Chr15:31479078 | Bma03g00061 | Bma-Chr3:510136 | 2.85E-12 | transposed | |
Bma03g00061 | Bma-Chr3:510136 | Bma03g00362 | Bma-Chr3:2697882 | 0 | wgd | |
Bma03g00061 | Bma-Chr3:510136 | Bma08g00920 | Bma-Chr8:48179296 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g00061 | K01728 | - | csv:101205739 | 693.73 |