Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00062 ATGGAAACGAAGAGCAGCTTCTTCTTCCATGTCCTCACAGGGCCATGGTTCTTTGTGTTCGCCAGCTTCCTCATCATGTCAATGGCCGGGACGCCTTACATGTTCGGCCTCTACTCCGGCGCCGTCAAATCAGTCCTCGGCTACGACCAAACTACGCTCAACTTAATCAGCTTCTTCAAGGACTTGGGTACAAACGTCGGTGTGCTCTCCGGACTGATCAACGAGGTTACCCCGCCGTGGGTTGTCCTATCCATGGGCTCTGCTATTAATTTTTTCGGCTATTTCATGATCTGGCTTTCAGTCACTGAAAAAGTCCCTAAACCTCCGGTTTGGTTGGTGGGTTTGTACATCTGTTTGGGCGCTAACTCCACTGCGTTTGCCAACACCGGCGCTCTCGTCACCGCCGTCAAAAACTTCCCGGAGAGACGAGGAGTCGTCATCGGAATCCTCAAAGGCTACGTTGGTCTGAGCGGAGCTATTCTGACGCAGCTCTACCACGCTTTCTATGGCGACGATTCTAAGTCATTGATTCTTCTTATTGCTTGGCTTCCTTCTCTTGTTTCCTTGGTTTTTCTTCGAACCATTCGGGTTATGAAGGTGGATCATCAGGAAAATGAGCTCAAGATTTTCTATAGATTTCTTTTTATTTCTCTCGGACTTGCAGGGTTTCTCATGTTGATGATTATTTTAGAACAGAAATTTCAGTTTTCTCATGTGGAGTACAGTGGAAGTGCTTCAATGGTGTTCCTTCTACTCTTTCTCCCGCTTTCTGTTGTAATCATTGAAGATTTAAAGCTATGGAACCAGAAGCTGAATCAAAATTACACCACTCTGAATATAATCACAGACAAGATGCCAACTTCAACGGAGTCGAAACAGGCGATTTCTTCCCCAACACCAAAATCTGAAACAAATCCAACCCAGATTTCATGCTGGAAAACTGCATTCAATCCTCCCGAAAGAGGCGAAGACTTCACGATTCTGCAAGCTCTCTTCAGCCTCGACATGTTGATTCTCTTCCTCTCGACGGCGTGTGGCGTGGGAGGAACTTTAACCGCCATCGATAACCTGGGTCAGATCGGAGCTTCTCTAAAATACCCGAAACGAAGCATAAGCACCTTCGTCTCTCTGGTGAGCATCTGGAATTATCTCGGGCGAGTCGTATCAGGTTTCGGGTCCGAGTATTTCCTGACAAAATTCAAAATCCCACGGCCATTAATCCTGACCTTAATCCTTCTATTATCATGCGTGGGCCACCTTCTGATCGCCTTCAACCCCTACGGAGGACTCTACGTCGCCTCCATCGTCATAGGATTCTGCTACGGAGCTCAATGGCCGATACTTTTCTCAATAATCTCAGAACTTTTCGGGCTGAAATACTACTCCACGCTGTACAATTTCGGATCGGTGGCAAGCCCAATTGGGCTATACGTCCTGAACGTAAGGGTGACGGGCCATTTGTACGACAAAGAAGGAGAAAGGCAATTGGCTGCTCGGGGGGTCAAAAGGGTACGCCAGAAAGAGCTGAGCTGTGCAGGAGTTGAATGCTTTAAATTGTCATTCATCATAATCACTTGTGTTACTTTGCTTGGAACCCTTTTTTCTTTCATTTTGGTGCTTAGGACCATCAAGTTTTACAAAAGCGATATCTACAAGAGGTTCCGGGATGACTCCGAGACCCAGACGCCTCAGCCCGAGTCCCCTACTGCCCGGATCGATGCGAATAAAGGATGA 1734 47.29 METKSSFFFHVLTGPWFFVFASFLIMSMAGTPYMFGLYSGAVKSVLGYDQTTLNLISFFKDLGTNVGVLSGLINEVTPPWVVLSMGSAINFFGYFMIWLSVTEKVPKPPVWLVGLYICLGANSTAFANTGALVTAVKNFPERRGVVIGILKGYVGLSGAILTQLYHAFYGDDSKSLILLIAWLPSLVSLVFLRTIRVMKVDHQENELKIFYRFLFISLGLAGFLMLMIILEQKFQFSHVEYSGSASMVFLLLFLPLSVVIIEDLKLWNQKLNQNYTTLNIITDKMPTSTESKQAISSPTPKSETNPTQISCWKTAFNPPERGEDFTILQALFSLDMLILFLSTACGVGGTLTAIDNLGQIGASLKYPKRSISTFVSLVSIWNYLGRVVSGFGSEYFLTKFKIPRPLILTLILLLSCVGHLLIAFNPYGGLYVASIVIGFCYGAQWPILFSIISELFGLKYYSTLYNFGSVASPIGLYVLNVRVTGHLYDKEGERQLAARGVKRVRQKELSCAGVECFKLSFIIITCVTLLGTLFSFILVLRTIKFYKSDIYKRFRDDSETQTPQPESPTARIDANKG 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 512202 513935 - Bma016332.1 Bma03g00062 78735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00062 577 CDD MFS_Mch1p_like 14 532 - -
Bma03g00062 577 PANTHER MFS TRANSPORTER 4 563 - -
Bma03g00062 577 Gene3D MFS general substrate transporter like domains 330 546 IPR036259 -
Bma03g00062 577 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 563 - -
Bma03g00062 577 MobiDBLite consensus disorder prediction 557 577 - -
Bma03g00062 577 Pfam Nodulin-like 15 260 IPR010658 -
Bma03g00062 577 SUPERFAMILY MFS general substrate transporter 17 547 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00062 Bma-Chr3:512202 Bma03g00360 Bma-Chr3:2672057 0 dispersed
Bma12g01012 Bma-Chr12:42196598 Bma03g00062 Bma-Chr3:512202 3.71E-111 transposed
Bma11g00195 Bma-Chr11:1750042 Bma03g00062 Bma-Chr3:512202 0 wgd
Bma03g00062 Bma-Chr3:512202 Bma03g00359 Bma-Chr3:2654455 0 wgd
Bma03g00062 Bma-Chr3:512202 Bma08g00921 Bma-Chr8:48186928 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00062 - - csv:101208506 820.076