Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00114 ATGGAGATAACGTACGCGTCACCCAGCTCGTTCAACATCGCTACATCCGACTCCGACTCCGCTCCGTCCATGCCGGCTGCGACCCGACCCGTCAAGGTCCTTCCCTTTCAGTATCCGAATGCGGAGGCGTCGACCGCGTCGACTTCTTATGCGAGCGCCATGTTTGCAAAGTGGACGGCGAAGGTCAAGCGGATGACTTGGATTGAATGGATGGAACTTCTCTTACCTTGCTCTCGTTGGATTAGGACGTACAAATTCCGGGAGTATTTTCAGGTCGATCTCATGGCGGGAATAACAGTTGGTGTCATGCTAGTTCCACAGTCGATGTCATACGCAAAATTAGCTGGGCTTGAACCAATATACGGACTTTATTCTGGTTTTGTGCCTCTATTTGTATATGCGATATTTGGCTCCTCTCGCCAGCTTGCAGTTGGTCCAGTGGCATTGGTTTCTCTCCTGGTTTCTAATGTATTAGGTGGAATTGTTGATTCTTCTGAGGCTTTGTATACAGAGCTTGCAATATTATTGGCCCTTATGGTTGGAATATTGGAATGCACCATGGGTCTTTTGAGGCTTGGGTGGCTTATTCGTTTTATCAGTCACTCAGTGATTTCTGGCTTTACTTCTGCTTCAGCCATTGTAATTGCATTATCTCAAGTGAAATATTTTTTGGGATATTCAATAGACAGAACTAGCAAAATTGTGCAACTGATTGAGAGCATAGTACATGGAGCAGATGGGTTTTTATGGCAACCTTTTGTGATGGGATCTATCATTCTCGCAATACTTCAGATTATGAAGTATTTGGGGAACGCAAGAAAGTACTTGCGGTTCCTAAGAGCTGCAGGTCCCCTCACAGCAATAGTGTTGGGCACGACATTTGTGAAAATATTTAAACCGTCTACCATTTCATTAGTGGGAGACATACCCCAAGGACTTCCAAATTTCTCGATTCCTAAATGTTTCAAATATATGGAATCTTTAATTCCAACGGCAATTCTTATTACTGGAGTGGCCATATTGGAATCGGTTGGAATTGCCAAAGCTTTAGCAGCCAAGAATGGGTATGAGTTGGATTCTAATCAAGAGCTTTTTGGTCTTGGCGTCTCCAACATTGTTGGATCATTTTTTTCAATATATCCTTCAACAGGGTCCTTCTCTAGATCAGCTGTAAATCATGAAAGTGGAGCAAAAACTGGCTTATCTGGAGTTATTTCAGGAATTATAATGGGATGTGCCCTTTTATTCATGACTCCATTATTTGAATACATACCTCAGTGTGCTTTGGCAGCCATCGTGATTTCTGCTGTAATTGGGCTTGTGGACTACAACCAGGCTATCTTTTTGTGGAATATAGATAAGAAAGAATTTCTTCTTTGGACAATTACAGCAACTGCAACTTTGTTCCTTGGAATCGAAATTGGTGTCCTGATTGGGGTGGGTGTTTCACTTGCTTTTGTTATCCATGAATCTGCAAATCCACATATTGCTATCTTGGGCCGTCTTCCAGGAACCACTGTGTATAGAAACATTCAACAATATCCAGAAGCATTTACTTACAATGGAATTGTGATTGTTCGGATCGATGCACCATTTTATTTTGCTAATACAAGTTACATAAAAGAAAGACTACGTGAATATGAAGTTGAAGTTGATCGATCAGCTAGTCGTGGTCCAGAAGTTGAACGACTTTATTTTGTGATTATTGAGATGGCACCCGTTACTTACATAGACTCCAATGCTGTTCATGCTTTGAAAGACTTGTATCAGGAGTACAAACAGCGTGATATCCAGATGGCCATTTCCAATCCAAATAGAGACGTTTTGCTAACTTTATCAAAATCGGGCATTATCGAGCTGCTTGGTAAGGAGTGGTTCTTTGTGAGAGTTCATGATGCTGTTCAAGTTTGCCTTCAACACGTTCAACACTTGAAGGAAACAACACCTAAATCCCCAGCCTCTTTACCTGATAATCAATCTAATTTCTTTAGAAGACTTCTAAACCGCAGAGGTGAAGACTCGTCGATCAGTCAGTTAGAATCGGGCAGCCAACAACCGCAAAATTCCAACGAGCCAGAGTCTCAGCTGGAACCTTTGTTGCCTAGGCGGCCTTGA 2115 42.36 MEITYASPSSFNIATSDSDSAPSMPAATRPVKVLPFQYPNAEASTASTSYASAMFAKWTAKVKRMTWIEWMELLLPCSRWIRTYKFREYFQVDLMAGITVGVMLVPQSMSYAKLAGLEPIYGLYSGFVPLFVYAIFGSSRQLAVGPVALVSLLVSNVLGGIVDSSEALYTELAILLALMVGILECTMGLLRLGWLIRFISHSVISGFTSASAIVIALSQVKYFLGYSIDRTSKIVQLIESIVHGADGFLWQPFVMGSIILAILQIMKYLGNARKYLRFLRAAGPLTAIVLGTTFVKIFKPSTISLVGDIPQGLPNFSIPKCFKYMESLIPTAILITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNIVGSFFSIYPSTGSFSRSAVNHESGAKTGLSGVISGIIMGCALLFMTPLFEYIPQCALAAIVISAVIGLVDYNQAIFLWNIDKKEFLLWTITATATLFLGIEIGVLIGVGVSLAFVIHESANPHIAILGRLPGTTVYRNIQQYPEAFTYNGIVIVRIDAPFYFANTSYIKERLREYEVEVDRSASRGPEVERLYFVIIEMAPVTYIDSNAVHALKDLYQEYKQRDIQMAISNPNRDVLLTLSKSGIIELLGKEWFFVRVHDAVQVCLQHVQHLKETTPKSPASLPDNQSNFFRRLLNRRGEDSSISQLESGSQQPQNSNEPESQLEPLLPRRP 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 896303 903224 - Bma016383.1 Bma03g00114 78787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00114 704 Gene3D STAS domain 493 641 IPR036513 -
Bma03g00114 704 CDD STAS_SulP_like_sulfate_transporter 514 630 - -
Bma03g00114 704 ProSitePatterns SLC26A transporters signature. 119 140 IPR018045 GO:0008271|GO:0008272
Bma03g00114 704 Pfam STAS domain 514 633 IPR002645 -
Bma03g00114 704 MobiDBLite consensus disorder prediction 671 704 - -
Bma03g00114 704 ProSiteProfiles STAS domain profile. 513 637 IPR002645 -
Bma03g00114 704 SUPERFAMILY SpoIIaa-like 515 637 IPR036513 -
Bma03g00114 704 MobiDBLite consensus disorder prediction 672 695 - -
Bma03g00114 704 PANTHER SULFATE TRANSPORTER 4.1-RELATED 45 671 - -
Bma03g00114 704 Pfam Sulfate permease family 90 463 IPR011547 GO:0016021
Bma03g00114 704 PANTHER SULFATE TRANSPORTER 45 671 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma03g00114 704 TIGRFAM sulP: sulfate permease 76 633 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00114 Bma-Chr3:896303 Bma05g01398 Bma-Chr5:53381935 5.79E-130 dispersed
Bma03g00114 Bma-Chr3:896303 Bma01g02625 Bma-Chr1:83812419 2.68E-130 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00114 K18059 - qsu:112035695 1081.24