Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g00140 | ATGGCGAATCGGTGGTGGGCTGGAAATGCCGCCATGAGAGGCATGAACCCTCTGTCATCTCCGCCGTCTCTTCACCTGAGAAATCCCGAGGAAGATCACGACGAAATGAATCTATTTGGAAGCCGAAGAGAGCAAGAATTCATGGAGATGAACCACAATAACAACAATACAACTCCCACAAATAGCAGCTCTTCTACGAAGAAGCAAACCCTTGTTGAAGAAGAAAGCAATCAAGATATCGATCCGGATACTGAAGATCCAAACTCCGGTAGCCAAGAGAGCATCGAACCAGGTCCCGGAAGCTCAAGGCGCAGGCCTCGCGGCCGACCGGCTGGGTCTAAGAACAAGCCGAAACCTCCGATTGTGATTACCAAAGAGAGCCCCAACACTCTCCGAAGCCATGTGTTGGAAATCAGCAGCGGCAGTGACGTAGCCGAGAGCATAGCGACCTTTGCCCAACGCCGACAGAGAGGAGTCTCCGTCCTCAGCGGCAATGGCGTCGTCACTAATGTAACTCTACGGCAACCCTCTGCGCCGAGTGGAGTGCTCAATCTCCATGGAAGCTTCGAGATTTTGTCTCTCTCCGGCGCTTTTTTGCCAGCCCCATCGCCTCCGGGAGCAACCGGACTAACAATTTACTTAGCTGGTGGGCAAGGTCATGTGGTGGGTGGCTCGGTAGTTGGTTCTCTAATGGCTGCTGGGCCAGTGATGGTGATCGTAGCAACGTTCACTAATGCTATCTATGAGCGATTGCCGCTGGAGGATGAGGGTGGAAGTGAACAGCATATGCAAGTAGAGCTGCAATCAGGCGGAGGCAATTCAGGTTCTCATGATGTTGGTGGACAAGGCTCAACTCCTATGTATAATCTGCCTCCTAATTTGCTACCCAACAGTCAAAATCAAATGCCCCATGATTTGTTCTGGAGCTCTCCTCGCCCTCCATCCTCTTACTGA | 954 | 51.89 | MANRWWAGNAAMRGMNPLSSPPSLHLRNPEEDHDEMNLFGSRREQEFMEMNHNNNNTTPTNSSSSTKKQTLVEEESNQDIDPDTEDPNSGSQESIEPGPGSSRRRPRGRPAGSKNKPKPPIVITKESPNTLRSHVLEISSGSDVAESIATFAQRRQRGVSVLSGNGVVTNVTLRQPSAPSGVLNLHGSFEILSLSGAFLPAPSPPGATGLTIYLAGGQGHVVGGSVVGSLMAAGPVMVIVATFTNAIYERLPLEDEGGSEQHMQVELQSGGGNSGSHDVGGQGSTPMYNLPPNLLPNSQNQMPHDLFWSSPRPPSSY | 317 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1061309 | 1062262 | - | Bma016410.1 | Bma03g00140 | 78813 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g00140 | 317 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 132 | 245 | IPR005175 | - | |
Bma03g00140 | 317 | Gene3D | - | 131 | 267 | - | - | |
Bma03g00140 | 317 | MobiDBLite | consensus disorder prediction | 257 | 317 | - | - | |
Bma03g00140 | 317 | MobiDBLite | consensus disorder prediction | 26 | 49 | - | - | |
Bma03g00140 | 317 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 14 | 317 | IPR014476 | GO:0003680 | |
Bma03g00140 | 317 | MobiDBLite | consensus disorder prediction | 1 | 129 | - | - | |
Bma03g00140 | 317 | CDD | DUF296 | 132 | 215 | IPR005175 | - | |
Bma03g00140 | 317 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 128 | 258 | - | - | |
Bma03g00140 | 317 | PIRSF | ESCAROLA | 37 | 316 | IPR014476 | GO:0003680 | |
Bma03g00140 | 317 | MobiDBLite | consensus disorder prediction | 50 | 71 | - | - | |
Bma03g00140 | 317 | ProSiteProfiles | PPC domain profile profile. | 128 | 264 | IPR005175 | - | |
Bma03g00140 | 317 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 14 | 317 | - | - | |
Bma03g00140 | 317 | MobiDBLite | consensus disorder prediction | 83 | 98 | - | - | |
Bma03g00140 | 317 | MobiDBLite | consensus disorder prediction | 262 | 306 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00140 | Bma-Chr3:1061309 | Bma02g01165 | Bma-Chr2:53776721 | 4.72E-76 | dispersed | |
Bma03g00140 | Bma-Chr3:1061309 | Bma03g00284 | Bma-Chr3:2105603 | 7.27E-117 | wgd | |
Bma03g00140 | Bma-Chr3:1061309 | Bma08g01008 | Bma-Chr8:49104811 | 6.40E-120 | wgd | |
Bma03g00140 | Bma-Chr3:1061309 | Bma08g01108 | Bma-Chr8:50062189 | 3.52E-133 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g00140 | - | - | qsu:112039774 | 378.637 |