Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00162 ATGGCATCTTTCATAATTCAGAAACCTCGACAAAGATCACCATTCATGAAAGCTGGATTAAAAACGCTTGAAAGCATTGGGGCTTTGGAGCAGTTCATGTTAAAACATAAGAAAGATTATGTAGATTTGCATCGTACAACAGAAAAGGAGAGAGACAGCATTGAGCATGAAGTTAGTGCTTTTATCAAAGAATGCCAAGAACAAATCAATATTCTTAAAAATAGCATAAACGATGAGGAAGTGCACTCAAAAGGCTGGCTTGGAGTTAAGACTGAAGAATCTAATGCTGACACTGTGGCACACAAACATGGGGTGGTTCTAATTCTGAGTGAGAGACTCCATTCCGTTACATCGCAATTTGATAATTTAAGAGCTATTCGCTTCCAAGATATCATTAATAAAGCAATGCCAAGACGAAAACCCAAACGGATCACCAATAAAATCTCTTCAAATGCCTCTAACTCAGAAGTCTCTGAGATGATGAGACAGCCGGAGGATTATGAACCTGAGCCTCTAAGAGTTCAGCAGGAACTCTTGAATGACGAAACACGGGCACTTCAGGCAGAGTTAACTAGTCTTCTCAGTGCAGTTCATGAAACTGAAACAAAAATGGTGGAAATGTCTGCTTTGAATCACCTCATGTCTACTCATGTTTTGCATCAGGCACAACAAATAGAACAACTTTATGATCAGGCAGTTGAAGCGACGACGAACGTTGAACTCGGAAACAAGCAGCTTTCCCAAGCTATCCAGCGAAATAGCGGCAGCAGAACTTTCCTTCTGCTTTTTCTAGTAGTACTTACTTTCTCGGTCCTTTTTCTTGATTGGTACAGT 834 40.29 MASFIIQKPRQRSPFMKAGLKTLESIGALEQFMLKHKKDYVDLHRTTEKERDSIEHEVSAFIKECQEQINILKNSINDEEVHSKGWLGVKTEESNADTVAHKHGVVLILSERLHSVTSQFDNLRAIRFQDIINKAMPRRKPKRITNKISSNASNSEVSEMMRQPEDYEPEPLRVQQELLNDETRALQAELTSLLSAVHETETKMVEMSALNHLMSTHVLHQAQQIEQLYDQAVEATTNVELGNKQLSQAIQRNSGSRTFLLLFLVVLTFSVLFLDWYS 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1249683 1251478 + Bma030962 Bma03g00162 78835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00162 278 Coils Coil 62 82 - -
Bma03g00162 278 Pfam SNARE-complex protein Syntaxin-18 N-terminus 4 54 IPR019529 -
Bma03g00162 278 PANTHER SYNTAXIN-18 5 278 - -
Bma03g00162 278 Gene3D - 180 275 - -
Bma03g00162 278 SUPERFAMILY t-snare proteins 43 242 IPR010989 GO:0016020|GO:0016192
Bma03g00162 278 PANTHER SYNTAXIN-18 5 278 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00162 K08492 - zju:107413789 424.091