Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma03g00203 ATGGGAGCTTTGAGCAACGCTGGTTTCGCTTCAGCGTTCAAATCTCCTCTCGACAAGGACTTGCTCTCGAGGACAAAGACCAAAGGCGGCCATGCTTCATCTTGCTTCATTATTTCCACAAACTTTTCCAGATTCAGCAGAATCTACAGCTCGATATCTGAGACTGGGAGTGAGATTCAGAAACTCCCCTCTAAGCCCACAACCTCGAACAGCAGGAACATAATGGAAGAGTACAATATAGCGATGAAGAAGATGATGCGGAATCCGTACGAGTATCATCACGATCTGGGCATGAACTACACCCTCATAGCGGACAATGTGATAGTGGGATCTCAGCCTCAGAAACCCGAAGATATAGATCACCTGAAAAAAGAAGAGAAGGTGGCGTATATTCTCAATTTGCAGCAGGATAAGGACGTTGAGTATTGGGGAATCGACTTGCAGGAGATAATAAAAAGATGTCGAGATCTTGGAATTCGCCACATGAGGAGGCCTGCGAGAGATTTCGACCCGGATTCCCTGAGAAGCGGATTGCCGAAAGCCGTTTCTTCGTTAGAATGGGCTATATGTGAAGGACGAGGAAAAGTTTATGTGCATTGCACTGCTGGACTTGGGAGGGCGCCTGCTGTTGCAATTGCGTACATGTTCTGGTTTTCTGGAATGAGTCTTAATACAGCTTATGATACGCTGACTTCAAAGAGACCTTGTGGACCCAACAAAAGAGCCATACGATGGGCTACTTATGATCTCGCAAAGAATGATATGTGGAAGGAGCCATTCGAGAATCTACCAGATTATGCATTCAAGGATGTTGCTGATTGGGAGAGAAACTTGATTCAAGAACGAGTTCGTACCCTCCGTGGCACCTGA 870 46.21 MGALSNAGFASAFKSPLDKDLLSRTKTKGGHASSCFIISTNFSRFSRIYSSISETGSEIQKLPSKPTTSNSRNIMEEYNIAMKKMMRNPYEYHHDLGMNYTLIADNVIVGSQPQKPEDIDHLKKEEKVAYILNLQQDKDVEYWGIDLQEIIKRCRDLGIRHMRRPARDFDPDSLRSGLPKAVSSLEWAICEGRGKVYVHCTAGLGRAPAVAIAYMFWFSGMSLNTAYDTLTSKRPCGPNKRAIRWATYDLAKNDMWKEPFENLPDYAFKDVADWERNLIQERVRTLRGT 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1549497 1551123 - Bma016471.1 Bma03g00203 78876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma03g00203 289 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 96 245 IPR029021 -
Bma03g00203 289 ProSiteProfiles Dual specificity protein phosphatase domain profile. 99 256 IPR020422 GO:0006470|GO:0008138
Bma03g00203 289 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 176 235 IPR000387 GO:0016311|GO:0016791
Bma03g00203 289 Pfam Dual specificity phosphatase, catalytic domain 120 241 IPR000340 GO:0008138|GO:0016311
Bma03g00203 289 CDD DSP_laforin-like 98 245 IPR045204 GO:0019203|GO:0046838
Bma03g00203 289 Gene3D Protein tyrosine phosphatase superfamily 82 289 IPR029021 -
Bma03g00203 289 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 4 289 - -
Bma03g00203 289 SMART dsp_5 99 243 IPR020422 GO:0006470|GO:0008138
Bma03g00203 289 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 4 289 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00203 Bma-Chr3:1549497 Bma03g00369 Bma-Chr3:2743839 1.24E-43 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma03g00203 - - zju:107413978 438.728