Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma03g00203 | ATGGGAGCTTTGAGCAACGCTGGTTTCGCTTCAGCGTTCAAATCTCCTCTCGACAAGGACTTGCTCTCGAGGACAAAGACCAAAGGCGGCCATGCTTCATCTTGCTTCATTATTTCCACAAACTTTTCCAGATTCAGCAGAATCTACAGCTCGATATCTGAGACTGGGAGTGAGATTCAGAAACTCCCCTCTAAGCCCACAACCTCGAACAGCAGGAACATAATGGAAGAGTACAATATAGCGATGAAGAAGATGATGCGGAATCCGTACGAGTATCATCACGATCTGGGCATGAACTACACCCTCATAGCGGACAATGTGATAGTGGGATCTCAGCCTCAGAAACCCGAAGATATAGATCACCTGAAAAAAGAAGAGAAGGTGGCGTATATTCTCAATTTGCAGCAGGATAAGGACGTTGAGTATTGGGGAATCGACTTGCAGGAGATAATAAAAAGATGTCGAGATCTTGGAATTCGCCACATGAGGAGGCCTGCGAGAGATTTCGACCCGGATTCCCTGAGAAGCGGATTGCCGAAAGCCGTTTCTTCGTTAGAATGGGCTATATGTGAAGGACGAGGAAAAGTTTATGTGCATTGCACTGCTGGACTTGGGAGGGCGCCTGCTGTTGCAATTGCGTACATGTTCTGGTTTTCTGGAATGAGTCTTAATACAGCTTATGATACGCTGACTTCAAAGAGACCTTGTGGACCCAACAAAAGAGCCATACGATGGGCTACTTATGATCTCGCAAAGAATGATATGTGGAAGGAGCCATTCGAGAATCTACCAGATTATGCATTCAAGGATGTTGCTGATTGGGAGAGAAACTTGATTCAAGAACGAGTTCGTACCCTCCGTGGCACCTGA | 870 | 46.21 | MGALSNAGFASAFKSPLDKDLLSRTKTKGGHASSCFIISTNFSRFSRIYSSISETGSEIQKLPSKPTTSNSRNIMEEYNIAMKKMMRNPYEYHHDLGMNYTLIADNVIVGSQPQKPEDIDHLKKEEKVAYILNLQQDKDVEYWGIDLQEIIKRCRDLGIRHMRRPARDFDPDSLRSGLPKAVSSLEWAICEGRGKVYVHCTAGLGRAPAVAIAYMFWFSGMSLNTAYDTLTSKRPCGPNKRAIRWATYDLAKNDMWKEPFENLPDYAFKDVADWERNLIQERVRTLRGT | 289 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 1549497 | 1551123 | - | Bma016471.1 | Bma03g00203 | 78876 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma03g00203 | 289 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 96 | 245 | IPR029021 | - | |
Bma03g00203 | 289 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 99 | 256 | IPR020422 | GO:0006470|GO:0008138 | |
Bma03g00203 | 289 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 176 | 235 | IPR000387 | GO:0016311|GO:0016791 | |
Bma03g00203 | 289 | Pfam | Dual specificity phosphatase, catalytic domain | 120 | 241 | IPR000340 | GO:0008138|GO:0016311 | |
Bma03g00203 | 289 | CDD | DSP_laforin-like | 98 | 245 | IPR045204 | GO:0019203|GO:0046838 | |
Bma03g00203 | 289 | Gene3D | Protein tyrosine phosphatase superfamily | 82 | 289 | IPR029021 | - | |
Bma03g00203 | 289 | PANTHER | PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC | 4 | 289 | - | - | |
Bma03g00203 | 289 | SMART | dsp_5 | 99 | 243 | IPR020422 | GO:0006470|GO:0008138 | |
Bma03g00203 | 289 | PANTHER | DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN | 4 | 289 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma03g00203 | Bma-Chr3:1549497 | Bma03g00369 | Bma-Chr3:2743839 | 1.24E-43 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma03g00203 | - | - | zju:107413978 | 438.728 |